Jatropha Genome Database
- JcCA0007981.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0007981.30 + phase: 1 /TE
(882 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 431 e-121
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 420 e-117
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 403 e-112
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 320 2e-87
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 318 8e-87
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 225 8e-59
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 214 2e-55
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 175 8e-44
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 164 1e-40
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 155 1e-37
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 154 2e-37
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 144 2e-34
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 143 3e-34
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 125 9e-29
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 125 1e-28
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 124 1e-28
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 123 3e-28
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 115 1e-25
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 105 9e-23
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 104 2e-22
IMGA|Medtr6g069750.1 Reverse transcriptase, putative chr06_pseud... 102 1e-21
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 90 5e-18
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 87 4e-17
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 85 1e-16
IMGA|Medtr8g044880.1 polyprotein-like, putative chr08_pseudomole... 83 8e-16
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 76 7e-14
IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA po... 76 8e-14
IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA po... 74 3e-13
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 72 1e-12
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 67 4e-11
IMGA|Medtr3g097190.1 copia-type polyprotein, putative chr03_pseu... 62 1e-09
IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein, chr0... 60 4e-09
IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG... 59 1e-08
IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA po... 59 1e-08
IMGA|Medtr8g012170.1 polyprotein, putative chr08_pseudomolecule_... 57 6e-08
IMGA|Medtr5g086740.1 Reverse transcriptase, RNA-dependent DNA po... 55 2e-07
IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative chr... 52 9e-07
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/826 (31%), Positives = 420/826 (50%), Gaps = 74/826 (8%)
Query: 82 KSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRNRTLMD 141
K++R D G E+ K F GI+ + TP NG ER+++ +++
Sbjct: 459 KTIRIDNGPEFMLKD-------------FYASHGIIHHKSCVETPQQNGRVERKHQHILN 505
Query: 142 MVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKTPYELWTGRKPSLKHLHVWGCP 200
+VR+++ S LP + W A+ +L+NR+ + + ++PY + + PSL V+GC
Sbjct: 506 VVRALLFQSKLPPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCL 565
Query: 201 AEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFFEDV------ 254
A + + TKL S+ S F+GY +GY ++ TSR F +R +F E +
Sbjct: 566 CYASTLQNHRTKLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHETILPYHKN 625
Query: 255 ------DFGGRNKERNIVFEEEPSKDDSVLIPFVVSDSVQTPVAPVPIQDPIQDNAXXXX 308
D+ ++ ++ P+ + V IP V+ D + +
Sbjct: 626 PSSTTADWNYYPSSQSYSHDQSPNVNHQVHIPAVIDDILPS----------------THV 669
Query: 309 XXXXXXXXXXSVQMPLRRSTRERRSAIP-DDYIV-------FLQEHEDTVDMIDDDPVSF 360
+ + RRS R R + + DY+ + H + I + SF
Sbjct: 670 LPPSPPYDSPPIHVSPRRSNRVRTAPLHLQDYVCNSVHSTTYPLSHYINYNNISTNHASF 729
Query: 361 YHAMQS----------SDSHKWIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTK 410
++Q+ S W +AM E +++ WD+V L KPIGC+WI+K K
Sbjct: 730 ISSLQTTPEPTTYVEASKHDCWNKAMQAELLALEKTGTWDIVDLPAYVKPIGCRWIYKVK 789
Query: 411 RDSQGNVERYKARFVAKGFTQKEGIDYKETFSPVSSKDSFRTIMALVANLDLELHQMDVK 470
++ G++ERYKAR VAKG+TQ EG+DY ET+SPV+ + R ++AL + + LHQ+DV
Sbjct: 790 HNADGSIERYKARLVAKGYTQIEGLDYFETYSPVAKLTTVRLVIALASIHNWHLHQLDVN 849
Query: 471 TAFLNGDIDETIYMVQPENFVIGDPKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFE 530
AFL+G++ E +YM+ P I P H VCKLKKS+YGLKQASRQWY K V++ +
Sbjct: 850 NAFLHGELQEDVYMILPPGINIAKP-HQVCKLKKSLYGLKQASRQWYEKLTSVLIQQHYI 908
Query: 531 ANAVENCVYHKFSGSRFIFLVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVL 590
+ ++ ++ K S F L++YVDDI+LA + K L F++KDLG+ + L
Sbjct: 909 QASSDHSLFIKKSSDSFTILLVYVDDIILAGTSLLEFQNIKSILDTSFKIKDLGQLKYFL 968
Query: 591 GIQIHRDRSRGILGLSQKSYIDKVLKRFSMQNSRPLDTPIAKGDKF-SNQQCPKSELEIQ 649
GI++ S+ + L Q+ Y +L S+P+ TP K + P ++
Sbjct: 969 GIEV--AHSKLGISLYQRKYCLDLLHDSGHIGSKPISTPSDPSTKLHHDTSTPYDDIP-- 1024
Query: 650 EMQKVPYASAVGSLMYVQVCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGH 709
Y VG L+Y+ TRPDI+FI L ++LSNP + H AA R +RYL G
Sbjct: 1025 -----AYRRLVGRLLYLNN-TRPDITFITQQLSQFLSNPTIAHHNAALRTLRYLKSCPGK 1078
Query: 710 MLTYRRSDQLEIIGYTDSDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAE 769
L + R+ L + G++D+D+AGC D+RKS +G F L ISW++ KQT V+ S+ EAE
Sbjct: 1079 GLFFPRNSSLTLQGFSDADWAGCLDTRKSVTGQCFFLGNSLISWRTKKQTTVSRSSSEAE 1138
Query: 770 FVASYEASNQTIWLRNLVTGLRVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKF 829
+ A A+ + WL L+ L + +P LYCD++SA+ KH+EI
Sbjct: 1139 YRALASATCEIQWLLYLLNDLHIT--CSKPPVLYCDNQSALHIAANPVFHERTKHLEIDC 1196
Query: 830 LAMKERVQSGQISLEHIGTNSMIADPLTKAVIPKVFHEHTTHMGIV 875
++E++Q+G + L + + IAD TKA++PK F + +G++
Sbjct: 1197 HIVREKLQAGVLKLLPVSSQDQIADFFTKALLPKTFSLLLSKLGLI 1242
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 274/893 (30%), Positives = 441/893 (49%), Gaps = 94/893 (10%)
Query: 4 TKQKRL----GAIRSSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEK 59
+KQK L +S EL+H DI GP I++ +G RYF++ +DD+SR+ ++ L+ K
Sbjct: 531 SKQKHLPFSSSLSHASTNFELLHFDIWGPISISSVHGHRYFLTILDDHSRFLWIILLKSK 590
Query: 60 SESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQ 119
SE K++ + Q K VRSD G E+ F GI+ Q
Sbjct: 591 SEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFL-------------LNDFYSSHGIIHQ 637
Query: 120 YTMPGTPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AK 178
+ TP NG ER+++ ++++ R+++ S LP S W A+ +L+NR+P+ + +
Sbjct: 638 KSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAVFLINRVPTHVLHNQ 697
Query: 179 TPYELWTGRKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTT 238
+PY + + P ++ ++KL + S F+GY +GY ++ +
Sbjct: 698 SPYHVLFHKLPDIQLF---------------KSKLQPRARKSLFLGYKSGYKGYHLFDLS 742
Query: 239 SRTFFETRIATFFEDV-DFGGRNKERNIVFEE-EPSKDDSVLIPFVVSDSVQTPVAPVPI 296
+R F +R F E++ + ++ PS ++ P +++ TP A +P
Sbjct: 743 TREIFVSRHVIFHENILPYTFTTSSTTPSWDYFSPSTTETSHSP---NNTPSTPSASLP- 798
Query: 297 QDPIQDNAXXXXXXXXXXXXXXSVQMPLRRSTRERRSAIPDDYIVFLQEHEDTVDMIDDD 356
+P R STR + S +LQ++
Sbjct: 799 ------------HTQSSSPSVPVSHLP-RHSTRNKISP------SYLQDYVCNSINSTTY 839
Query: 357 PVSFYHAMQSSDSHK------------------------WIEAMNEEYKSMQDNQVWDLV 392
P+S Y + SH W +AM E ++++ W+ V
Sbjct: 840 PISHYLSHNKLSSHHSSYVLSLHTHNEPKTYAEANKHECWQKAMQVELQALEQTGTWNFV 899
Query: 393 QLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQKEGIDYKETFSPVSSKDSFRT 452
L KPIGC+W+FK KR + G++ERYKAR VAKG+TQ EG+DY +TFSPV+ + R
Sbjct: 900 DLPPNVKPIGCRWVFKIKRHADGSIERYKARLVAKGYTQVEGLDYFDTFSPVAKLTTVRL 959
Query: 453 IMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFVIGDPKHLVCKLKKSIYGLKQA 512
I+AL + LHQ+DV AFL+GD+ E +YM P + + VCKL KS+YGLKQA
Sbjct: 960 IIALASINHWHLHQLDVNNAFLHGDLQENVYMTLPPG-ISAKHSNTVCKLNKSLYGLKQA 1018
Query: 513 SRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLVLYVDDILLATNWKVLLHETKV 572
SR+WY K +++ + ++ ++ K +G+ + L++YVDDI+LA + K
Sbjct: 1019 SRKWYDKLTSILLKHQYTQAHSDHSLFTKKTGTSYTILLVYVDDIILAGDSLEEFQYIKS 1078
Query: 573 FLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSYIDKVLKRFSMQNSRPLDTPIAK 632
L F++KDLG+ F LG+++ S+ + L QK Y +L S+P TP
Sbjct: 1079 ILDTLFKIKDLGQLKFFLGLEV--AHSQLGISLCQKKYCLDLLADSGTIGSKPASTPSDP 1136
Query: 633 GDKFSNQQCPKSELEIQEMQKVPYASAVGSLMYVQVCTRPDISFIVGMLGRYLSNPGMDH 692
K L +++ Y +G L+Y+ TRPDI++I L ++LS P H
Sbjct: 1137 SLKLHKD----GALPYEDIPS--YRRLIGRLLYLNT-TRPDITYITQQLSQFLSAPTHTH 1189
Query: 693 WKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTDSDFAGCQDSRKSTSGYIFLLAGGAIS 752
AA RV+RYL G L + R+ L++ GY+D+D+AGC D+R+S SG F L IS
Sbjct: 1190 HSAALRVLRYLKNCPGKGLFFPRNSPLQLQGYSDADWAGCLDTRRSISGQCFFLGNSLIS 1249
Query: 753 WKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLVTGLRVVGGIERPLKLYCDSRSAVLF 812
W++ KQ V+ S+ EAE+ A A+ + WL L+ L V + P+ L+CD++SA+
Sbjct: 1250 WRTKKQVTVSRSSSEAEYRALASATCELQWLIYLLQDLHVT-CTKLPV-LFCDNQSALHI 1307
Query: 813 XXXXXXXXXXKHIEIKFLAMKERVQSGQISLEHIGTNSMIADPLTKAVIPKVF 865
KH+EI ++E++ SG + L + + +AD TK++ P+ F
Sbjct: 1308 AANPVFHERTKHLEIDCHIVREKLHSGILKLLPVSSKEQVADFFTKSLHPQPF 1360
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 269/873 (30%), Positives = 432/873 (49%), Gaps = 63/873 (7%)
Query: 25 ICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEVENQLGKKIKSV 84
IC H A ++ F S +D+SR+ ++ L+ K+E K++ ++N K +
Sbjct: 565 ICDLCHFA-KHKHLPFTS--NDHSRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFI 621
Query: 85 RSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRNRTLMDMVR 144
R+D G E+ + GI+ Q + TP NG ER+++ ++++ R
Sbjct: 622 RTDNGPEFM-------------LSTLYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGR 668
Query: 145 SMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-KTPYELWTGRKPSLKHLHVWGCPAEA 203
+++ S LP + W A++ +L+NR+P+ + ++PY + + P V+GC A
Sbjct: 669 ALLYQSKLPPAYWCYAIQHAVFLINRVPTPTLNNQSPYFVLHHKLPDSSLFKVFGCLCYA 728
Query: 204 RPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFFEDVDFGGRNKER 263
+ + TKL + S F+GY +G+ Y+ SR F +R TF E+
Sbjct: 729 STLQSHTTKLKHRARKSIFIGYQSGYKGFTLYDLHSREIFISRHVTFHEN---------- 778
Query: 264 NIVFEEEPSKDDSVLIPF-VVSDSVQTPVAPVPIQDPIQDNAXXXXXXXXXXXXXXSVQM 322
F P S + S TPVAP PI D+ S +
Sbjct: 779 ---FLPYPHTSSSTSPDWQYFSYFHPTPVAPNLPSPPIIDDIIAPDHPSPDPTPPTSPIL 835
Query: 323 PL--RRSTRERRS-AIPDDYIV-------FLQEHEDTVDMIDDDPVSFYHAMQSSDSHK- 371
P+ R STR + + DYI + H + + + F ++ + K
Sbjct: 836 PIVPRHSTRNVTAPSYLQDYICNNIHAFTYPITHSLSHHHLSNSRSFFVMSLHTQPEPKS 895
Query: 372 ---------WIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKA 422
W AM E ++++ W LV L KPIGC+WI+K K + G VERYKA
Sbjct: 896 YAEASKLDCWKHAMQVELQALEKTGTWKLVDLPPNVKPIGCRWIYKVKFHADGTVERYKA 955
Query: 423 RFVAKGFTQKEGIDYKETFSPVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETI 482
R VAKG+ Q EG+DY +T+SPV+ + R ++AL + + LHQ+DV AFL+GD+ E +
Sbjct: 956 RLVAKGYNQIEGLDYLDTYSPVAKLTTVRLVIALSSINNWHLHQLDVNNAFLHGDLQEDV 1015
Query: 483 YMVQPENFVIGDPKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKF 542
YM+ P + + VCKL KS+YGLKQASR+WY K V+ + + ++ K
Sbjct: 1016 YMMVPPG-IKSSKLNQVCKLTKSLYGLKQASRKWYEKLTSVLFDQHYTQATSDYSLFVKK 1074
Query: 543 SGSRFIFLVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGI 602
+ + F L++YVDDI+LA N K L F++KDLG+ + LGI++ S+
Sbjct: 1075 TSTSFTVLLVYVDDIILAGNSISEFSHIKSILDSLFKIKDLGQLKYFLGIEV--AHSKLG 1132
Query: 603 LGLSQKSYIDKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASAVGS 662
+ L Q+ Y +L S+P+ TP K E ++ +++ VG
Sbjct: 1133 ISLCQRKYCLDLLADIGSLGSKPISTPSDSSIKLHLDSSSPFE-DVPACRRL-----VGR 1186
Query: 663 LMYVQVCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEII 722
L+Y+ TRPDI+FI L ++LS P H AA RV++YL G L + RS L +
Sbjct: 1187 LLYLNN-TRPDITFITQQLSQFLSQPTQAHHSAALRVLKYLKSCPGKGLFFPRSSSLNLQ 1245
Query: 723 GYTDSDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIW 782
G++D+D+AGC D+R+S SG F L ISW++ KQ V+ S+ EAE+ A A+ + W
Sbjct: 1246 GFSDADWAGCIDTRRSISGQCFFLGNSLISWRTKKQITVSKSSSEAEYRALASATCELQW 1305
Query: 783 LRNLVTGLRVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAMKERVQSGQIS 842
+ L+ L + P+ LYCD++SA+ KH+EI +++++QSG +
Sbjct: 1306 ILYLLKDLHTTCP-KLPV-LYCDNQSAIHIANNPVFHERTKHLEIDCHLIRDKLQSGVLK 1363
Query: 843 LEHIGTNSMIADPLTKAVIPKVFHEHTTHMGIV 875
L + + +AD TKA++PK F+ + +G++
Sbjct: 1364 LLTVSSQDQVADFFTKALLPKPFNILLSKLGLI 1396
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 219/746 (29%), Positives = 340/746 (45%), Gaps = 148/746 (19%)
Query: 14 SSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEV 73
++ + EL+H DI GP+ T + +YFI+ +DD+S+ + L+ KS + V K++ V
Sbjct: 16 TTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSCKSNAFHVLKAFILMV 75
Query: 74 ENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSE 133
ENQ +K++RSD G E+ S E LF Q GI+ Q + P TP NGV E
Sbjct: 76 ENQFSTTVKTIRSDNGLEF-----TSNET-----TLFFQSKGIIHQKSCPYTPQQNGVVE 125
Query: 134 RRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVAKTPYELWTGRKPSLKH 193
R+++ +++ R+++ S LP W E
Sbjct: 126 RKHKFILETARALLFQSKLPVKYWSEF--------------------------------- 152
Query: 194 LHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFFED 253
+ TK D KTI FVGY ++GYK N +++
Sbjct: 153 ---------------HRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKI----------- 186
Query: 254 VDFGGRNKERNIVFEEEPSKDDSVLIPFVVS-DSVQTPVAPV--------PIQDPIQDNA 304
+ R+++F E + PF +S D P P P QD +
Sbjct: 187 ------HVSRDVIFHE-------TIFPFAMSKDPTHFPKFPFHCVSLHDYPTSYDDQDYS 233
Query: 305 XXXXXXXXXXXXXXSVQMP-------------LRRSTRERRSAI-PDDYI---------- 340
+ P LRRS R ++ DY+
Sbjct: 234 SKETTTSPTHITPENSTSPTHITPENSTSIPQLRRSQRLHKTPTYLTDYVHNVPSSTVSN 293
Query: 341 -------------VFLQEHEDTVDMIDDDPVSFYHAM----------QSSDSHKWIEAMN 377
+F +H + D+ D SF + ++S W +AM
Sbjct: 294 SQPPQPHSLPLNALFTLKHYVSPDVFSFDSQSFIMNISHDCEPNSYEEASMDPAWQKAMT 353
Query: 378 EEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQKEGIDY 437
+E+ ++ DN W L L + KK +GC+W++K K + G+VERYKAR V KG+TQ GIDY
Sbjct: 354 QEFLALHDNNTWTLTNLPKDKKSVGCRWVYKVKHKADGSVERYKARLVVKGYTQHHGIDY 413
Query: 438 KETFSPVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFVIGDPKH 497
ETFSPV + RT++ A +HQ+DV AFL+GD+ E +YM P K
Sbjct: 414 TETFSPVVKMTTVRTLIVAAAKKQWNIHQLDVNNAFLHGDLHEEVYMDIPPGLATPH-KD 472
Query: 498 LVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLVLYVDDI 557
LVCKL KS+YGLKQASRQWY K + + + G+E + + +++K G+ +FL +YVDDI
Sbjct: 473 LVCKLNKSLYGLKQASRQWYEKLTEALHTRGYEHSPHDYSLFYKKRGASNVFLGVYVDDI 532
Query: 558 LLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSYIDKVLKR 617
LL + E K FL F++KDLG + LG+++ + GIL +SQ+ ++ +LK
Sbjct: 533 LLTGTDTNEIDELKRFLDNQFKIKDLGRLHYFLGLEV-LYKDDGIL-VSQRKFVLDLLKE 590
Query: 618 FSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASAVGSLMYVQVCTRPDISFI 677
F+ + PL +P+ K + + + Y +G L ++ TR D+++
Sbjct: 591 FNCDHMAPLSSPLDPNIKLRSHEGKVLD------DPTYYRKLIGKLNFL-THTRLDLAYG 643
Query: 678 VGMLGRYLSNPGMDHWKAAKRVMRYL 703
V +L +Y+ +P H AA ++RYL
Sbjct: 644 VQLLSQYMQDPREPHLHAAFHMLRYL 669
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/505 (35%), Positives = 281/505 (55%), Gaps = 14/505 (2%)
Query: 372 WIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQ 431
W +AM E ++++ W LV L KPI C+WI+K K + G++ERYKAR VAKG+ Q
Sbjct: 896 WKQAMQVELSALENTGTWKLVDLPPNVKPIVCRWIYKIKHHADGSIERYKARLVAKGYNQ 955
Query: 432 KEGIDYKETFSPVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFV 491
EG+DY +T+SPV+ + RTI+AL + +HQ+DV AFL+GD+ E +YM+ P+ +
Sbjct: 956 IEGLDYFDTYSPVAKLTTVRTIIALAYMNNWHIHQLDVNNAFLHGDLQEDVYMIVPQG-I 1014
Query: 492 IGDPKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLV 551
+ VCKL KS+YGLKQASR+WY K ++V + + ++ ++ K + + F L+
Sbjct: 1015 TPSKSNQVCKLIKSLYGLKQASRKWYEKLTSLLVHHHYLQSTSDHSLFIKKTYTSFTALL 1074
Query: 552 LYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSYI 611
+YVDD+++ + K L E+KDLG+ + LG+++ S+GI L Q+ Y
Sbjct: 1075 VYVDDVIITGTSLSEFQDIKAILHSALEIKDLGQLKYFLGLEV-AHSSQGI-SLCQRKYC 1132
Query: 612 DKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVP-YASAVGSLMYVQVCT 670
+L ++P TP K P +P Y +G L+Y+ T
Sbjct: 1133 LDLLTDIGFLAAKPASTPSDPSCKLHADGGP-------PFSDIPSYRRLIGRLIYL-TNT 1184
Query: 671 RPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTDSDFA 730
RP I+F L ++L++P H+ AA R++RYL ++ G L + R L + GY+D+D+A
Sbjct: 1185 RPYITFATQQLSQFLNSPTEKHYIAATRILRYLKKSPGQGLFFPRDSSLFLSGYSDADWA 1244
Query: 731 GCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLVTGL 790
GC DSR+S SG F L ISWK+ KQ V+ S+ EAE+ A A+ + WL L+ L
Sbjct: 1245 GCLDSRRSISGQCFFLGHSLISWKTKKQLTVSRSSSEAEYRALGAATCELQWLLYLLHDL 1304
Query: 791 RVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAMKERVQSGQISLEHIGTNS 850
V + LYCD++SA+ KH+EI ++E++Q+ + L + +
Sbjct: 1305 HVT--TVKLHVLYCDNQSALHIAANPVFHERTKHLEIDCHLVREKLQACIMKLLPVTSAD 1362
Query: 851 MIADPLTKAVIPKVFHEHTTHMGIV 875
+AD TK ++P+ FH +G++
Sbjct: 1363 QLADFFTKPLLPQPFHTLLFKLGML 1387
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 18/255 (7%)
Query: 5 KQKRLGAIRSSNV----LELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKS 60
KQK+L S +V EL+H DI GP + + + RYF++ +DDYS + ++ L+ K
Sbjct: 521 KQKKLSFPTSVSVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKY 580
Query: 61 ESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQY 120
E K++ + Q K VRSD G E+ F GIV
Sbjct: 581 EVSQHVKNFINLIHTQYHITPKVVRSDNGPEFL-------------LNSFYASKGIVHHK 627
Query: 121 TMPGTPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKT 179
+ TP NG ER+++ ++++ R+++ S LP S W AL +++NR+ S + K+
Sbjct: 628 SCVETPQQNGRVERKHQHILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHNKS 687
Query: 180 PYELWTGRKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTS 239
PY+L G P ++ V+G + + + TKL ++ + F+GY+ +GY + +
Sbjct: 688 PYQLLHGTIPDVQTFKVFGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDIHT 747
Query: 240 RTFFETRIATFFEDV 254
R +R F E +
Sbjct: 748 REIHISRHVQFHEHI 762
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 236/505 (46%), Gaps = 48/505 (9%)
Query: 18 LELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEVENQL 77
+L+H DI GP I +G +YF++ +DD++R+ ++ L+ K+E K++ A +ENQ
Sbjct: 566 FQLLHFDIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQF 625
Query: 78 GKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRNR 137
K +R+D G E+ F GI+ Q + TP NG ER+++
Sbjct: 626 HITPKIIRTDNGSEFL-------------LHDFYASKGILHQRSCVETPQQNGRVERKHQ 672
Query: 138 TLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-KTPYELWTGRKPSLKHLHV 196
++++ R+++ S LP S W A +L+NR+P+ + ++PY+L P + V
Sbjct: 673 HILNIGRALLYQSKLPLSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKV 732
Query: 197 WGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFFEDV-D 255
+GC A + + TKL+++ S F+GY +G Y+ +R F +R F E V
Sbjct: 733 FGCLCYASSLQSHRTKLETRARKSVFLGYKSGFKGSVLYDLHTREIFISRHVVFHECVLP 792
Query: 256 FGGRNKERNIVFEEEPSKDDSVLIPFVVSDSVQTPVAPVPIQDPIQDNAXXXXXXXXXXX 315
+ + ++ +E S + +P S + +P I D
Sbjct: 793 YKSNSSPQSHDWEYFTSFSTPLDLP---SGTDTSP------HSAITDIVPYTSPTPTSTS 843
Query: 316 XXXSVQMPLRRSTRERRSAIPDDYIVFLQEHEDTVDMIDDDPVS---FYHAMQSSDSH-- 370
+ PL R P F+ ++ + + +S YH + +S SH
Sbjct: 844 SIIDIPPPLPTRHSSRNKTPPSYLKDFICANKSSASVNSLHSISNFVSYHNISNSHSHFI 903
Query: 371 -------------------KWIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKR 411
W +AM E ++++ W ++ L KPIGC+WI+K K
Sbjct: 904 LSLHAHTEPKSYTEANKFECWRQAMQVELTALENTGTWKIIDLPSNAKPIGCRWIYKVKH 963
Query: 412 DSQGNVERYKARFVAKGFTQKEGIDYKETFSPVSSKDSFRTIMALVANLDLELHQMDVKT 471
+ G +ERYKAR VAKG+ Q EG+DY +T+SPV+ + R ++AL + + LHQ+DV
Sbjct: 964 HADGTIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRLVLALASLNNWHLHQLDVNN 1023
Query: 472 AFLNGDIDETIYMVQPENFVIGDPK 496
AFL+GD+ E +YM P P
Sbjct: 1024 AFLHGDLQEDVYMDIPPGVSTNKPN 1048
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 175/303 (57%), Gaps = 12/303 (3%)
Query: 376 MNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQKEGI 435
M E +++ W +V L KPIGC+WIFK K + G++ERYKAR VAKG+ Q EG+
Sbjct: 1 MQSEITALEQTGTWKIVDLPPAVKPIGCRWIFKIKHNVDGSIERYKARLVAKGYNQIEGL 60
Query: 436 DYKETFSPVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFVIGDP 495
DY +T+SPV+ + R I+AL + LHQ DV AFL+G++ E +YM+ P V
Sbjct: 61 DYFDTYSPVAKLTTVRFIIALASINHWHLHQFDVNNAFLHGELQEDVYMIIPPG-VPHSH 119
Query: 496 KHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLVLYVD 555
+ VCKL KS+YGL+QAS +WY K +++S G++ A + ++ K + S F L++YVD
Sbjct: 120 QDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQAASDASLFIKHTHSSFTILLVYVD 179
Query: 556 DILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSYIDKVL 615
D++LA + + K L F++KD+G+ + LG+++ +S + L Q+ Y +L
Sbjct: 180 DVILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSKSG--ISLCQRKYCLDLL 237
Query: 616 KRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVP-YASAVGSLMYVQVCTRPDI 674
+ + S+P++TP K N P +P Y +G L+Y+ TRPDI
Sbjct: 238 EDSGLTGSKPMNTPSDPSIKLHNDSAP-------SFPDIPAYRRLIGRLLYLNT-TRPDI 289
Query: 675 SFI 677
++I
Sbjct: 290 TYI 292
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 189/368 (51%), Gaps = 47/368 (12%)
Query: 509 LKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLVLYVDDILLATNWKVLLH 568
++ ASR+WY K ++V+ G++ + ++ ++ K S ++F L++YVDDI+LA N
Sbjct: 382 IRLASRKWYEKLASLLVNHGYKQASADHSLFIKHSTTQFTALLVYVDDIILAGNSLDEFT 441
Query: 569 ETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSYIDKVLKRFSMQNSRPLDT 628
K L F++KDLG+ + LG+++ S+ + L Q+ Y +L + +S+P+ T
Sbjct: 442 FIKNILHNSFKIKDLGQLKYFLGLEV--AHSKLGISLCQRKYGLDLLSDTGLLDSKPVAT 499
Query: 629 PIAKGDKFSNQQCPKSELEIQEMQKVP-YASAVGSLMYVQVCTRPDISFIVGMLGRYLSN 687
P K + P +P Y VG L+Y+ TRPDI+FI L ++LS
Sbjct: 500 PSDPSIKLYHDDSPL-------YTDIPAYRRLVGRLLYLNA-TRPDITFITQQLSQFLSK 551
Query: 688 PGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTDSDFAGCQDSRKSTSGYIFLLA 747
P H+ AA RV+RYL G L + RS I GY+D+D+AGC+D+R+S SG F L
Sbjct: 552 PTQTHYNAALRVLRYLKTCPGKGLHFPRSSLPYIQGYSDADWAGCRDTRRSISGQCFFLG 611
Query: 748 GGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLVTGLRVVGGIERPLKLYCDSR 807
ISW++ KQ V+ S+ EAE+ A A++ ++ ER
Sbjct: 612 DSLISWRTKKQLTVSRSSSEAEYRALGAATSNPVFH-------------ER--------- 649
Query: 808 SAVLFXXXXXXXXXXKHIEIKFLAMKERVQSGQISLEHIGTNSMIADPLTKAVIPKVFHE 867
KH+EI ++E++ +G + L I + + +AD TK+++P+ F+
Sbjct: 650 --------------TKHLEIDCHIVREKLAAGIMKLLPISSKNQLADCFTKSILPQPFNS 695
Query: 868 HTTHMGIV 875
+G+V
Sbjct: 696 LLFKLGLV 703
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 179/403 (44%), Gaps = 45/403 (11%)
Query: 73 VENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVS 132
+ENQ K +R+D G E+ F GI+ Q + TP NG
Sbjct: 2 IENQFHVTPKIIRTDNGSEFL-------------LHEFYASKGILHQRSCVETPQQNGRV 48
Query: 133 ERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVAK-TPYELWTGRKPSL 191
ER+++ ++++ R+++ S LP S W A +L+NRIP+ + +PY L P +
Sbjct: 49 ERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDI 108
Query: 192 KHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFF 251
V+GC A + + TKL+++ S F+GY +GY Y+ +R F +R F
Sbjct: 109 TTFKVFGCLCYASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFH 168
Query: 252 EDV-DFGGRNKERNIVFEEEPSKDDSVLIPFVVSDSVQTPVAPVPIQDPIQDNAXXXXXX 310
E V + + +++ +E S ++IP VSD +P +
Sbjct: 169 ECVLPYKSISSSQSLDWEYFTSISSLLIIP-SVSDISHSPSTTKYV-------PHTQPTT 220
Query: 311 XXXXXXXXSVQMPLRRSTRERRS-AIPDDYIVFLQEHEDTVDMIDDDPVSFYHAMQSSDS 369
S P+R S+R + S + DYI + ++ YH + + S
Sbjct: 221 TTTPTNDPSRPPPIRCSSRNKISPSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPHS 280
Query: 370 H---------------------KWIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFK 408
H W +AM E ++++ W ++ KPIGC+WI+K
Sbjct: 281 HFILSLHAHNEPKTYTEANKFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYK 340
Query: 409 TKRDSQGNVERYKARFVAKGFTQKEGIDYKETFSPVSSKDSFR 451
K ++ +ERYKAR VAKG+ Q EG+DY +T+SPV+ + R
Sbjct: 341 IKHNADDTIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIR 383
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 197/438 (44%), Gaps = 45/438 (10%)
Query: 18 LELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEVENQL 77
+L+H DI GP I + +G +YF++ +DD++R+ ++ L+ K+E K++ +ENQ
Sbjct: 40 FQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWIILLKTKAEVPMHIKNFIVMIENQF 99
Query: 78 GKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRNR 137
K +R+D G E+ F GI+ Q + TP NG ER+++
Sbjct: 100 HVTPKIIRTDNGSEFL-------------LHEFYASKGILHQSSCVETPQQNGRVERKHQ 146
Query: 138 TLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVAK-TPYELWTGRKPSLKHLHV 196
++++ R+++ S LP S W A +L+NRI + + +PY L P + V
Sbjct: 147 HILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYHLLYDSPPDITTFKV 206
Query: 197 WGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFFEDV-D 255
+GC A + + TKL+++ S F+GY +GY Y+ +R F +R F E V
Sbjct: 207 FGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHECVLP 266
Query: 256 FGGRNKERNIVFEEEPSKDDSVLIPFVVSDSVQTPVAPVPIQDPIQDNAXXXXXXXXXXX 315
+ + +++ +E + S I VSD +P I+
Sbjct: 267 YKSISSSQSLDWEYF-TSISSPPIIPSVSDISHSP-------STIESVPHTQPTTTTTPT 318
Query: 316 XXXSVQMPLRRSTRERRS-AIPDDYIVFLQEHEDTVDMIDDDPVSFYHAMQSSDSH---- 370
S P+R S+R + S + DYI + ++ YH + + SH
Sbjct: 319 NDPSPPPPIRCSSRNKISPSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPHSHFILS 378
Query: 371 -----------------KWIEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDS 413
W +AM E ++++ W ++ KPIGC+WI+K K +
Sbjct: 379 LHAHNEPKTYTEANKFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYKIKHHA 438
Query: 414 QGNVERYKARFVAKGFTQ 431
G +ERYKAR VAKG+ Q
Sbjct: 439 DGTIERYKARLVAKGYNQ 456
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 13/272 (4%)
Query: 538 VYHKFSGSRFIFLVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRD 597
++ K + S F L++YVDDI+LA N K L F++KDLG+ +VLG+++
Sbjct: 1 MFTKHTDSSFTILLVYVDDIILAGNSLSEFQHIKSILHSSFKIKDLGQLKYVLGLEVAHS 60
Query: 598 RSRGILGLSQKSYIDKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVP-Y 656
+ +GI L Q+ Y +L NS+P+ T K N P E +P Y
Sbjct: 61 K-QGI-SLCQRKYCLDLLSDSGTINSKPVSTSSDASLKLHNDSSPPYE-------DIPSY 111
Query: 657 ASAVGSLMYVQVCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRS 716
+G L+Y+ TRPDI+FI L ++LS P H AA RV++YL G L + R+
Sbjct: 112 RRLIGRLLYLNS-TRPDITFITQQLSQFLSKPTQTHHNAALRVLKYLKCCPGKGLFFPRN 170
Query: 717 DQLEIIGYTDSDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEA 776
L + G++D D+AGC DSR+S SG F + ISW++ KQT V+ S+ EAE+ A A
Sbjct: 171 SSLHLQGFSDVDWAGCVDSRRSISGQCFFIGNSLISWRTKKQTTVSRSSSEAEYRALASA 230
Query: 777 SNQTIWLRNLVTGLRVVGGIERPLKLYCDSRS 808
+ + W+ L+ L + + P+ L+CD+++
Sbjct: 231 TCELQWILYLLKDLNIQSS-KLPV-LFCDNQN 260
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 29/327 (8%)
Query: 550 LVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGL--SQ 607
+++YVDD+++A N + K +L + F MKDLG + LG+++ +RG GL Q
Sbjct: 3 VLIYVDDLVIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLEL----ARGANGLFMCQ 58
Query: 608 KSYIDKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASAVGSLMYVQ 667
+ Y +L M + +P P+ + K + P Y + L+Y+
Sbjct: 59 RKYTLDILDECKMLDCKPSTFPMEQNQKLVLDKGPTCS------DPSRYRRLISRLIYLT 112
Query: 668 VCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTDS 727
+ P+I++ V +L RV+RYL + G + + + L+++ Y DS
Sbjct: 113 I-MHPEITYSVHIL--------------TMRVLRYLKSSPGQGIILPKENDLQLVAYCDS 157
Query: 728 DFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLV 787
D+A C +R+STSGY+ L ISWK+ KQ+ V+ S+ EAE+ A +A ++ IWLR+L+
Sbjct: 158 DWASCPLTRRSTSGYLMKLGSAPISWKTKKQSTVSKSSSEAEYRAMGQAVSEVIWLRSLL 217
Query: 788 TGLRVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAMKERVQSGQISLEHIG 847
+ L+V + P L CD+++A+ KHIE+ ++ +Q G IS ++
Sbjct: 218 SSLQV--HYDSPTVLLCDNQAAMHLAANPVYHERTKHIEVDCHFIRTHLQEGTISTSYVP 275
Query: 848 TNSMIADPLTKAVIPKVFHEHTTHMGI 874
T AD TKA+ K F E T +G+
Sbjct: 276 TKKQQADIFTKALGAKQFQELTFKLGV 302
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 14/248 (5%)
Query: 8 RLGAIRSSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFK 67
+L ++S+ ELIH DI GP + +G +YFI+ +DDYSR+ ++ L KSE +
Sbjct: 509 KLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQ 568
Query: 68 SYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPS 127
++ +ENQ K+K+VR+D G E+ F GI Q + TP
Sbjct: 569 NFILNIENQFNCKVKTVRTDNGPEFL-------------MPDFYSSKGIEHQTSCVETPQ 615
Query: 128 MNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-KTPYELWTG 186
NG ER+++ ++++ R+++ S LP+ W ++ Y++NRIP+ + K+PY L G
Sbjct: 616 QNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYG 675
Query: 187 RKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETR 246
P L + V+GC + A + TK DS+ F+GY + +G Y+ +T F +R
Sbjct: 676 HDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFASR 735
Query: 247 IATFFEDV 254
T+ E +
Sbjct: 736 NVTYHEHI 743
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 130/248 (52%), Gaps = 14/248 (5%)
Query: 8 RLGAIRSSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFK 67
+L ++S+ ELIH DI GP + +G +YFI+ +DDYSR+ ++ L KSE +
Sbjct: 579 KLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQ 638
Query: 68 SYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPS 127
++ +ENQ K+K+VR+D G E+ F GI Q + TP
Sbjct: 639 NFILNIENQFNCKVKTVRTDNGPEFL-------------MPDFYSSKGIEHQTSCVETPQ 685
Query: 128 MNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-KTPYELWTG 186
NG ER+++ ++++ R+++ S LP+ W ++ Y++NRIP+ + K+PY L G
Sbjct: 686 QNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYG 745
Query: 187 RKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETR 246
P L + V+GC + A + TK DS+ F+GY + +G Y+ +T F +R
Sbjct: 746 HDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFASR 805
Query: 247 IATFFEDV 254
T+ E +
Sbjct: 806 NVTYHEHI 813
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 185/438 (42%), Gaps = 65/438 (14%)
Query: 5 KQKRLGAIRSSNV----LELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKS 60
KQK+L S +V EL+H DI GP I + + RYF++ +DDYSRY ++ L+ KS
Sbjct: 529 KQKKLPFSNSISVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVLLKSKS 588
Query: 61 ESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQY 120
E K++ ++ Q K+VRSD G E+ F GIV
Sbjct: 589 EVSQHVKNFINLIQTQYNITPKTVRSDNGPEFL-------------LHSFYASKGIVHHR 635
Query: 121 TMPGTPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKT 179
+ TP NG ER+++ ++++ R+++ S LP S W AL +++NR+ S + K+
Sbjct: 636 SCVETPQQNGRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKS 695
Query: 180 PYELWTGRKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTS 239
PY+L P+ V+G + + TKL ++ S F+GY+ +GY + +
Sbjct: 696 PYQLLHDTIPAEHIFKVFGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGYVLLDIHT 755
Query: 240 RTFFETRIATFFEDV-DFGGRNKERNIVFEEEPSKDDSVLIPFVVSDS-VQTPVAPVPIQ 297
R +R F+E + + + +E S S P SD+ + P +P P
Sbjct: 756 REIHISRHVQFYEHILPYPATSSSITTAWEYFSSDTCSSSNP--NSDTPITLPSSPPPFI 813
Query: 298 D---PIQDNAXXXXXXXXXXXXXXSVQMPLRRSTRERRSAIP-DDYIVFLQEHEDTVDMI 353
D P D+ R+S R DY+ + T ++
Sbjct: 814 DVDIPPTDHEHPISSIPSPSPPII------RKSIRNTHPPTHLQDYVC----NTSTASVL 863
Query: 354 DDD-----PVSFYHAMQ-----------SSDSHK-------------WIEAMNEEYKSMQ 384
D+ P+S Y++ S DSH W +AM E +++
Sbjct: 864 SDNSFVHHPISHYYSYNNLSSSHCAFAMSLDSHTEPTTYAEASKFDCWNQAMKVELSALE 923
Query: 385 DNQVWDLVQLSEGKKPIG 402
+ W LV L KPIG
Sbjct: 924 NTGTWRLVDLPPNVKPIG 941
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 169/411 (41%), Gaps = 102/411 (24%)
Query: 435 IDYKETFSPVSSKDSFRTIMALVANLDLELHQMDVKTAFLNGDIDETIYMVQPENFVIGD 494
+D SP+ SK FR D FL+GD+ E +YM P+
Sbjct: 185 VDPPPNISPIGSKWIFRL--------------NDANNTFLHGDLQEDVYMHPPQGVSPPR 230
Query: 495 PKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLVLYV 554
P VCKL KS+YGLKQASR+W+ K ++++ GF + ++ + S + F L++YV
Sbjct: 231 PGQ-VCKLLKSLYGLKQASRRWFEKLISLLLTIGFVQASADHSFLIRASPTSFTALLIYV 289
Query: 555 DDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSYIDKV 614
S+GI L Q+ Y +
Sbjct: 290 -----------------------------------------AHSSKGI-SLCQRKYCLDL 307
Query: 615 LKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASAVGSLMYVQVCTRPDI 674
L + + + TP+ P + + Y +G L+Y+ TRPDI
Sbjct: 308 LSDAGLTTCKSVSTPLDYACLLHIDDGPPFD------DVLAYRCLIGCLLYLTT-TRPDI 360
Query: 675 SFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTDSDFAGCQD 734
SF L ++++ P ++H + A V+RYL G L + R+ +++++G++D+D+ GC D
Sbjct: 361 SFATQQLSQFMAKPSVNHHRTALCVLRYLQVCPGRGLFFPRTSEMQLLGFSDADWGGCVD 420
Query: 735 SRKSTS------GYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLVT 788
SR+S + ++F L G IS S+ R +
Sbjct: 421 SRRSLAFQEAIHRFLFFLRSG-ISCFSISHP------------------------RTPMA 455
Query: 789 GLRVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAMKERVQSG 839
+R+ LYCD++SA+ KH++I ++E+VQ G
Sbjct: 456 HIRLS-------ILYCDNQSALHIAANPVFYERTKHLDIDCHIVREKVQRG 499
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 14/210 (6%)
Query: 17 VLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEVENQ 76
+L+H DI GPF + +G +YF++ +DD +R+ ++ ++ KSE+ K++ + VE Q
Sbjct: 590 AFDLVHFDIWGPFSTTSVHGHKYFLTILDDCTRHVWIVMLKNKSEASYQVKNFVSMVERQ 649
Query: 77 LGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRN 136
+KIK +RSD G E+ + F + GI+ Q + TP NG ERR+
Sbjct: 650 FERKIKMIRSDNGPEFMLRE-------------FYDKKGIIHQRSCVYTPQQNGRVERRH 696
Query: 137 RTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKTPYELWTGRKPSLKHLH 195
+ ++++ R+++ S LP++ W A+ YL+NRIP+K + K+ YE+ P L L
Sbjct: 697 QHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILNNKSSYEVLYNEVPDLSSLK 756
Query: 196 VWGCPAEARPYKPNETKLDSKTISSYFVGY 225
V+GC + A N K D K F+G+
Sbjct: 757 VFGCLSYASTLPVNRYKFDPKARKCAFLGF 786
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 176/357 (49%), Gaps = 61/357 (17%)
Query: 494 DPKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFS-GSRFIFLVL 552
D +V KL K++YGLKQA R W + + V GF+ E+ VY K S G+ + + L
Sbjct: 260 DYTEVVFKLNKALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVKGSEGTSLLIICL 319
Query: 553 YVDDILLATNWKVLLHETK--VFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKSY 610
+ L T ++L++TK + K F M D + + L+ +
Sbjct: 320 EI----LRTTKGLILNQTKYDTEIQKKFNMLDFNSS----------------ITLAYANN 359
Query: 611 IDKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYASAVGSLMYVQVC- 669
I++V + + +D I + +G L Y+ C
Sbjct: 360 INEV-----KEEDKGVDPTILR-------------------------RLIGLLRYL--CQ 387
Query: 670 TRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTY---RRSDQLEIIGYTD 726
+R DIS+ VG++ +++SNP H+ AAK+++RY+ T + + + + ++QL +I Y+D
Sbjct: 388 SRLDISYSVGIVSKFMSNPLKTHFLAAKKIIRYIHGTLQYGILFPEAQETEQLSMIDYSD 447
Query: 727 SDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNL 786
+D+ + R+ T+ ++F+L G ISW S KQ +VA S+ E E+V A+ Q WL+N+
Sbjct: 448 ADWCRDKRDRRRTTSFLFMLQGAPISWSSKKQPIVALSSCEVEYVVGSSAACQANWLQNV 507
Query: 787 VTGLRVVGGIERPLKLYCDSRSAVLFXXXXXXXXXXKHIEIKFLAMKERVQSGQISL 843
+ + +++P+KL D++ A+ KHIE KF ++++V +I++
Sbjct: 508 LEQSMI--KLKQPIKLLIDNKYAINLAKNHISHGKSKHIETKFHYLRDQVNKCKINI 562
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 140/308 (45%), Gaps = 53/308 (17%)
Query: 142 MVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-KTPYELWTGRKPSLKHLHVWGCP 200
MVRSM+ +P WG A+ T Y+LNR P+K + K P E+W+ RKPS+ +L V+G
Sbjct: 1 MVRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSI 60
Query: 201 AEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTSRTFFETRIATFFEDVDFGGRN 260
KL+ KT + VGY + Y+ + S+ TR E+ + +
Sbjct: 61 FYKHVPDSRRKKLEDKTEAMILVGY-HNTGAYRLLDLHSKKISITRDVKVLEEEYWDWNS 119
Query: 261 K-----ERNIVFEEEPSKDDSVLIPFVVSDSVQTPVAPVPIQDPIQDNAXXXXXXXXXXX 315
E+N++ E + D+ + V+S+ V P I P ++
Sbjct: 120 NECSVYEKNVIIENKKESDELLTNEEVISEEVSYE-EPTTIARPQRNK------------ 166
Query: 316 XXXSVQMPLRRSTRERRSAIPDDYIVFLQEHEDTVD---MIDDDPVSFYHAMQSSDSHKW 372
QM LRR LQ+ + T D D + V F + + +K
Sbjct: 167 -----QM-LRR----------------LQDCQVTGDDEIGSDGELVHFAMLVDTKPLYK- 203
Query: 373 IEAMNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQK 432
KS NQ W+L++L++GKK I KW+FK K + +G + ++KAR VA+ F +K
Sbjct: 204 -------LKSSGKNQTWELIKLTDGKKAIDVKWVFKLKLNPEGKIVKHKARLVARVFLKK 256
Query: 433 EGIDYKET 440
EG DY E
Sbjct: 257 EGFDYTEV 264
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 14/209 (6%)
Query: 18 LELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEVENQL 77
+L+H DI GP I +G +YF++ +DD++R+ ++ L+ K+E K++ A +ENQ
Sbjct: 566 FQLLHFDIWGPLAINYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQF 625
Query: 78 GKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRNR 137
K +R+D G E+ F GI+ Q + TP NG ER+++
Sbjct: 626 HITPKIIRTDNGSEFL-------------LHDFYASKGILHQRSCVETPQQNGRVERKHQ 672
Query: 138 TLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-KTPYELWTGRKPSLKHLHV 196
++++ R+++ S LP S W A +L+NR+P+ + ++PY+L P + V
Sbjct: 673 HILNIGRALLYQSKLPLSFWSYAFLHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKV 732
Query: 197 WGCPAEARPYKPNETKLDSKTISSYFVGY 225
+GC A + + TKL+++ S F+GY
Sbjct: 733 FGCLCYASSLQSHRTKLETRARKSVFLGY 761
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 138/307 (44%), Gaps = 55/307 (17%)
Query: 5 KQKRLG-AIRSSNV---LELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKS 60
KQK L +I +S+ EL+H DI GP I++ +G +YF++ +DD+SR+ ++ + KS
Sbjct: 505 KQKHLPFSISTSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTKS 564
Query: 61 ESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQY 120
KS+ V+ Q K +RSD G E+ F + GI+ Q
Sbjct: 565 GVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFL-------------ILSFYESLGILHQK 611
Query: 121 TMPGTPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKT 179
+ TP NG ER++ ++++ R+++ S LP S W AL +L+NR P+ + ++
Sbjct: 612 SCVETPQQNGRVERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQS 671
Query: 180 PYELWTGRKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTTS 239
PY + P + +K + KT+ F+GY +G+ + S
Sbjct: 672 PYYALHHKFPDID------------TFKNQASTRARKTV---FLGYKSGYKGFILLDIHS 716
Query: 240 RTFFETRIATFFEDVDFGGRNKERNIVFEEEPSKDDSVL--------IPFVVSDSVQTPV 291
R F +R F E F PS +S+ I VV+ SV TP
Sbjct: 717 REIFVSRHVVFHE-------------YFLPYPSNSESITSQWEYFSPIQAVVTKSVDTP- 762
Query: 292 APVPIQD 298
P+PI D
Sbjct: 763 PPIPIID 769
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 14 SSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEV 73
+S+ EL+H DI GP + + +G +YF++ +DD+SR+ ++ L+ KSE + K++ +
Sbjct: 573 ASSKFELLHFDIWGPLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLI 632
Query: 74 ENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSE 133
K +RSD G E+ F GI+ Q + TP NG E
Sbjct: 633 HTHYQITPKYIRSDNGPEFL-------------IPEFYASKGIIHQKSCVETPQQNGRVE 679
Query: 134 RRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKTPYELWTGRKPSLK 192
R+++ ++++ R+++ S LP W A+ +L+N++P+ K+PY+L P +
Sbjct: 680 RKHQHILNVARALLFQSKLPNFFWSYAVIHAVFLINKVPTPLFKQKSPYQLLYDSLPDIN 739
Query: 193 HLHVWGCPAEARPYKPNETKLDSKTISSYF 222
V+GC A +KL S+ S F
Sbjct: 740 SFKVFGCLCFASTLLAQRSKLQSRARKSIF 769
>IMGA|Medtr6g069750.1 Reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12976555-12977103 H
EGN_Mt090430 20090702
Length = 149
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 28/148 (18%)
Query: 376 MNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQKEGI 435
M E ++++ W LV L KPIGC+WI+K K + G+++RYKAR V KG+ Q EG
Sbjct: 1 MQAEITALENTGTWKLVDLPPNVKPIGCRWIYKIKHYADGSIQRYKARLVVKGYNQVEGW 60
Query: 436 DYKETFSP----------------------------VSSKDSFRTIMALVANLDLELHQM 467
DY +T+SP V+ + RT++AL + +H++
Sbjct: 61 DYFDTYSPVAKLTTARLVVKGYNQVEGWDYFDTYSLVAKMTTVRTVIALASINQWHIHKL 120
Query: 468 DVKTAFLNGDIDETIYMVQPENFVIGDP 495
D +AFL+GD+ E +YM+ P+ P
Sbjct: 121 DANSAFLHGDLQEDVYMLIPQGITTSKP 148
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 15/179 (8%)
Query: 14 SSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEV 73
S NV+ I I GP +A+ +G RYF++ +DD++R+ ++ L+ K+E K++ +
Sbjct: 511 SCNVVS-ISNYIWGPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMI 569
Query: 74 ENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSE 133
+N K +R+D G E+ F GI+ Q + TP NG E
Sbjct: 570 QNHFHTTPKFIRTDNGPEFM-------------LPSFYASHGIIHQKSCVETPQQNGRVE 616
Query: 134 RRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKTPYELWTGRKPSL 191
R+++ ++++ R+++ S LP S W A+ +L+NR+P+ + ++PY L + P +
Sbjct: 617 RKHQHILNVGRALLYQSKLPPSFWSYAIHHAVFLINRVPTPLLHNQSPYFLLHHKLPDI 675
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 10/115 (8%)
Query: 12 IRSSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKA 71
+R+ +VL ++H+DI GP + T +G RYFI+F+D+YS+ +LYLI KS++L+VFK +K
Sbjct: 34 MRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSKMLWLYLIKLKSDALEVFKKFKV 93
Query: 72 EVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQYTMPGTP 126
E Q G K+K + + GGEY K F + GI+ + T P TP
Sbjct: 94 LPEKQSGMKLKILITYGGGEYTSK----------DFESYCTNQGIIHEVTTPYTP 138
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 132/336 (39%), Gaps = 78/336 (23%)
Query: 5 KQKRL-----GAIRSSNVLELIHTDICGPFHIATRNGQRYFISFIDDYSRYGYLYLIHEK 59
KQ++L +I SSN EL++ DI GP + +GQRYF++ +DD+SR+ + L K
Sbjct: 482 KQRKLPYNSSTSIASSN-FELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKNK 540
Query: 60 SESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVPQ 119
SE + + ++N+ K +RSD G + + F GI+ Q
Sbjct: 541 SEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVFL-------------LSAFYASQGIIHQ 587
Query: 120 YTMPGTPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVA-K 178
+ TP N +L+NR+P+ + K
Sbjct: 588 RSCVETPQHN-----------------------------------VFLINRVPTLVLENK 612
Query: 179 TPYELWTGRKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTT 238
+PY++ P + V+GC A + + TKL S+ S F+GY +G Y+
Sbjct: 613 SPYQVLYKTLPDINSFKVFGCLCYASTLQSHRTKLQSRARKSVFLGYKSGYKGSFLYDLN 672
Query: 239 SRTFFETRIATFFEDV-DFGGRNKERNIVFEEEPSKDDSVLIPFVVSDSVQTPVAPVPIQ 297
++ F +R TF E + + N + ++ + QTP VP+
Sbjct: 673 TKEIFMSRNVTFHESILPYNSTNTHFSSNWQ------------YFTPSHTQTPFVDVPVP 720
Query: 298 DPIQDNAXXXXXXXXXXXXXXSVQMPLRRSTRERRS 333
+ S +PLR S+R R +
Sbjct: 721 STFPSSP----------IITPSSPLPLRTSSRTRHT 746
>IMGA|Medtr8g044880.1 polyprotein-like, putative
chr08_pseudomolecule_IMGAG_V3 10147539-10149356 H
EGN_Mt090430 20090702
Length = 196
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 19/179 (10%)
Query: 698 RVMRYLXRTKGHMLTYRRSDQLEIIGYTDSDFA-GCQDSRKSTSGYIFLLAGGAISWKSV 756
RV+ YL G L + R L+I GYT++D+A GC+D+R+S S F W
Sbjct: 2 RVLSYLKGCPGKGLFFPRQSSLQIQGYTNADWAVGCKDTRRSISEQCFF------CW--- 52
Query: 757 KQTLVATSTMEAEFVASYEASNQTIWLRNLVTGLRVVGGIERPLKLYCDSRSAVLFXXXX 816
S+ EAE+ A A+ + L L+ L+V +P LYCD++SA+
Sbjct: 53 -------SSSEAEYRALASATCELQRLTYLLRDLKV--NCIKPPVLYCDNQSAIYIAANP 103
Query: 817 XXXXXXKHIEIKFLAMKERVQSGQISLEHIGTNSMIADPLTKAVIPKVFHEHTTHMGIV 875
KH+EI ++E++Q+G L I + +AD TK+++P+ F+ + +G++
Sbjct: 104 VFHECTKHLEIDCHIVREKLQAGLFKLLPISSKDQVADFFTKSLLPQPFNPLLSKLGML 162
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 125 TPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAV-AKTPYEL 183
TP NGV+ER N+TL++ R M+S+ L + W EA+ T YL+NR P ++ KT YEL
Sbjct: 5 TPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYEL 64
Query: 184 WTGRKPSLKHLHVWGCPAEARPYKPNETKLDSK 216
W G+ +L V+GC Y NE KL+ +
Sbjct: 65 WPGKSVDYSNLRVFGCTVY---YHVNEWKLERR 94
>IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33354025-33354392 H EGN_Mt090430 20090702
Length = 108
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 64/99 (64%)
Query: 498 LVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFSGSRFIFLVLYVDDI 557
+V L+KS+YGLKQASR WY K +Q ++ +GF+ + ++ ++ S F+ +++YVDD+
Sbjct: 1 MVYWLRKSLYGLKQASRNWYSKLSQALIEYGFQESHADHSLFTYSRESIFMAVLIYVDDL 60
Query: 558 LLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHR 596
++A N + K +L + F MKDLG + LG+++ R
Sbjct: 61 VIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELAR 99
>IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
27872933-27871392 E EGN_Mt090430 20090702
Length = 256
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 550 LVLYVDDILLATNWKVLLHETKVFLSKHFEMKDLGEASFVLGIQIHRDRSRGILGLSQKS 609
+++YV D+++ N LL + L+ F +KDLG + LGI++ + +S G L ++Q
Sbjct: 1 MIVYVGDMIVTGNNTPLLQQLVSHLNSAFSLKDLGALKYFLGIEV-KPQSNGSLLITQSK 59
Query: 610 YIDKVLKRFSMQNSRPLDTPIAKGDKFS-NQQCPKSELEIQE--MQKVPYASAVGSLMYV 666
Y+ +L + MQ ++ L +P+ K S + P S+ + ++ + YA+ +G L V
Sbjct: 60 YVRDLLAKTDMQEAKSLPSPMISDLKLSKDGSTPFSDPTLCRSIVRALQYANLIGPLSNV 119
Query: 667 QVCTRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGHMLTYRRSDQLEIIGYTD 726
+ +S+ G+L R + TY L I+ Y D
Sbjct: 120 LRHLKGTLSW--GLLVRPIP-------------------------TY----PLSILAYCD 148
Query: 727 SDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNL 786
+D+ D R S +F L ISW + KQ ++A S+ EAE+ + A ++ +W++
Sbjct: 149 ADWGSDPDDR-SVDACVF-LGPNLISWWAKKQAVIARSSTEAEYSSLALAKSELLWIKTY 206
Query: 787 VTGLRVV 793
L+V+
Sbjct: 207 GARLKVI 213
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 36 GQRYFISFIDDYSRYGYLYLIHEKSESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGK 95
G RYF+ FIDDYS + ++Y+I + E ++ ++ ++ Q K IK R D EY
Sbjct: 3 GARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEY--- 59
Query: 96 YDGSGEQRPGPFALFLQECGIVPQYTMPGTPSMNGVSERRNRTLMDMVRSMISHSTLP 153
R FL E G +++ P T G +ER++R ++D V +M+ ++ P
Sbjct: 60 -------RDSKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 48/198 (24%)
Query: 59 KSESLDVFKSYKAEVENQLGKKIKSVRSDRGGEYYGKYDGSGEQRPGPFALFLQECGIVP 118
+S++ FK A +ENQ GKK+K ++ D G E+ F F + GI
Sbjct: 4 RSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCW----------SEFNEFCKTEGISR 53
Query: 119 QYTMPGTPSMNGVSERRNRTLMDMVRSMISHSTLPESLWGEALKTVAYLLNRIPSKAVAK 178
+ + TP N V++R N+TL++ R M+S++ L + WGE
Sbjct: 54 HHMVRNTPQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGE------------------- 94
Query: 179 TPYELWTGRKPSLKHLHVWGCPAEARPYKPNETKLDSKTISSYFVGYSERSRGYKFYNTT 238
TG +GC Y+ NE KL+S+ FVGY + + Y+ ++ +
Sbjct: 95 ------TG----------FGCTVY---YRVNEGKLESRAKKRVFVGYGDGVKEYRIWSPS 135
Query: 239 SRTFFETRIATFFEDVDF 256
+R F E V F
Sbjct: 136 ENRVILSRNVVFDEIVMF 153
>IMGA|Medtr3g097190.1 copia-type polyprotein, putative
chr03_pseudomolecule_IMGAG_V3 23165389-23165052 H
EGN_Mt090430 20090702
Length = 85
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 723 GYTDSDFAGCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIW 782
GY+DSD G + R+STSG +F AISW + +Q + A S+ EAE++A A+ Q IW
Sbjct: 15 GYSDSDRCGDRMDRRSTSGCLFKFNDAAISWCTKRQPITALSSCEAEYIAGTFAACQAIW 74
Query: 783 LRNLVTGL 790
L N++ L
Sbjct: 75 LDNVIKEL 82
>IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein,
chr08_pseudomolecule_IMGAG_V3 22106944-22106630 H
EGN_Mt090430 20090702
Length = 104
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 376 MNEEYKSMQDNQVWDLVQLSEGKKPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQKEGI 435
M + +++ W L LS+ K IGCKW ++ K G +ER+K + K +T++EG+
Sbjct: 1 MTNKLRAITTKNAWSLTALSKDKVVIGCKWEYRIKHKVNGTIERFKTFLMVKDYTRQEGV 60
Query: 436 DYKETFSPVSSKDSFRTIMALVANLDLELHQMD 468
+ +TFS V+ ++++V L Q+D
Sbjct: 61 NSLDTFSLVAKITIVCLLLSIVVAKGRILQQLD 93
>IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG_V3
9341518-9340611 H EGN_Mt090430 20090702
Length = 155
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 731 GCQDSRKSTSGYIFLLAGGAISWKSVKQTLVATSTMEAEFVASYEASNQTIWLRNLVTGL 790
G QD +KST+ Y+F++ ISW S KQ +VA S+ EA++VA+ A+ Q +W+ L+ L
Sbjct: 66 GDQDDKKSTTCYLFMIGAAPISWSSKKQGIVALSSSEAKYVATSYAACQALWIEMLLEEL 125
Query: 791 RVVGGIERPLKLYCDSRSAV 810
++R +KL D++ A+
Sbjct: 126 NAF-EVDR-IKLLVDNKLAI 143
>IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
24473881-24473486 H EGN_Mt090430 20090702
Length = 131
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 13/134 (9%)
Query: 599 SRGILGLSQKSYIDKVLKRFSMQNSRPLDTPIAKGDKFSNQQCPKSELEIQEMQKVPYAS 658
S+G++ L Q Y ++LK+F+M + ++ I D + + E + + +
Sbjct: 7 SKGLI-LHQTDYASEILKKFNMLDC---NSTITHADANIIYEVKE---EDEGVDPTMFRR 59
Query: 659 AVGSLMYVQVC-TRPDISFIVGMLGRYLSNPGMDHWKAAKRVMRYLXRTKGH---MLTYR 714
+GSL Y+ C +RP IS++VG++ R++SNP ++ +AK+++RY+ T + L +
Sbjct: 60 LIGSLRYL--CQSRPGISYLVGIVSRFMSNPLKTNFLSAKKILRYINSTLQYGILFLVVQ 117
Query: 715 RSDQLEIIGYTDSD 728
++QL++ GY+D+D
Sbjct: 118 ATEQLDMEGYSDAD 131
>IMGA|Medtr8g012170.1 polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 1857213-1857446 H
EGN_Mt090430 20090702
Length = 77
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 484 MVQPENFVIGDPKHLVCKLKKSIYGLKQASRQWYFKFNQVIVSFGFEANAVENCVYHKFS 543
M QP FV + VCKL+KS+YGLKQA + W+ + ++ + F+ + ++
Sbjct: 1 MSQPYGFVHPQHPNQVCKLRKSLYGLKQAPQAWFQALQKFLLGYNFQNAKSDTSLFIYVK 60
Query: 544 GSRFIFLVLYVDDILL 559
+ F + ++YVDDI L
Sbjct: 61 ANTFAYFLVYVDDIPL 76
>IMGA|Medtr5g086740.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33353678-33353912 H EGN_Mt090430 20090702
Length = 57
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 399 KPIGCKWIFKTKRDSQGNVERYKARFVAKGFTQKEGIDY 437
K +GC+W++K K + G +E+YKAR VAKG+TQ EG D+
Sbjct: 12 KIVGCRWVYKIKYKASGEIEKYKARLVAKGYTQVEGEDF 50
>IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 2876704-2878630 E
EGN_Mt090430 20090702
Length = 64
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 467 MDVKTAFLNGDIDETIYMVQPENFVIGDPKHLVCKLKKSIYGLKQASRQWYFK 519
MDV AFL+GD+ E +YM P F + LVCKL+KS Y LK A + W+ K
Sbjct: 1 MDVHNAFLHGDLQEDVYMKLPRGFHTSSSR-LVCKLRKSQYVLKHAPQCWFAK 52