Jatropha Genome Database

JcCA0007981.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0007981.10 - phase: 0 
         (258 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g043740.1 Sterol desaturase chr05_pseudomolecule_IMGA...   443   e-125
IMGA|Medtr8g073640.1 Sterol desaturase chr08_pseudomolecule_IMGA...    79   2e-15
IMGA|Medtr5g036470.1 Sterol desaturase chr05_pseudomolecule_IMGA...    78   4e-15
IMGA|Medtr5g036470.2 Sterol desaturase chr05_pseudomolecule_IMGA...    73   2e-13
IMGA|Medtr8g106630.1 Sterol desaturase chr08_pseudomolecule_IMGA...    68   4e-12

>IMGA|Medtr5g043740.1 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 18106400-18108754 F
           EGN_Mt090430 20090702
          Length = 263

 Score =  443 bits (1140), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/255 (80%), Positives = 233/255 (91%), Gaps = 1/255 (0%)

Query: 5   ISDELLGTFAPIVVYWVYSGLYILLGFF-DNYRLHTKQDEDEKNLVSKSTVFKGVLLQQS 63
           +SDE+LGTFAP++VYW+YSG Y++LG F ++YRLHTKQDED+KNLVSK  V KGVLLQQ+
Sbjct: 9   VSDEMLGTFAPLLVYWIYSGFYVVLGLFAEDYRLHTKQDEDDKNLVSKFDVVKGVLLQQA 68

Query: 64  IQAVVAILLFTVTGNDSQADTYPQPSLIVLARQFVTAMLVMDTWQYFMHRYMHHNKFLYK 123
           +QAVVA LLF VTG+DSQ+ T    SL+VLARQF+TAMLVMDTWQYFMHRYMH NKFLYK
Sbjct: 69  VQAVVATLLFAVTGSDSQSSTNENTSLLVLARQFITAMLVMDTWQYFMHRYMHQNKFLYK 128

Query: 124 HIHSQHHRLVVPYAFGALYNHPLEGLLLDTIGGALSFLMSGMSPRSSIFFFSFATIKTVD 183
           HIHS HHRL+VPY+FGALYNHP+EGLLLDTIGGALSFL+SGMSPR+SIFFFSFATIKTVD
Sbjct: 129 HIHSLHHRLIVPYSFGALYNHPIEGLLLDTIGGALSFLLSGMSPRASIFFFSFATIKTVD 188

Query: 184 DHCGLWLPGNLFHVFFKNNTAYHDVHHQLYGSKYNFSQPFFVMWDRILGTYMPYSLEKKE 243
           DHCGLWLPGNLFH+FF NN+AYHDVHHQLYG+KYNFSQPFFVMWD+ILGT+MPYSLEK+ 
Sbjct: 189 DHCGLWLPGNLFHMFFNNNSAYHDVHHQLYGNKYNFSQPFFVMWDKILGTHMPYSLEKRA 248

Query: 244 GGGFEVRPTKECKDD 258
            GGFE RP K  KD+
Sbjct: 249 SGGFESRPCKAYKDE 263


>IMGA|Medtr8g073640.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 14429368-14432468 E
           EGN_Mt090430 20090702
          Length = 271

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 17/235 (7%)

Query: 30  GFFDNYRLHTKQDEDEKNLVSKSTVFKGVLLQQSIQAVVAILLFTVTGNDSQADTYPQPS 89
           G+   Y++  K +  E     +  + + ++    +   V I  + V        + P PS
Sbjct: 48  GWLSKYKIQAKTNSRESE---ERCIIRLLVYHFGVNLPVMIFSYPVFKYMGMQSSLPLPS 104

Query: 90  LIVLARQFVTAMLVMDTWQYFMHRYMHHNKFLYKHIHSQHHRLVVPYAFGALYNHPLEGL 149
             V+  Q +   ++ D   Y+ HR +H  K+LYKH+HS HH    P+   + Y HP E L
Sbjct: 105 WRVVLTQIIFYFILEDFVFYWGHRILH-TKWLYKHVHSVHHEYATPFGLTSEYAHPAEIL 163

Query: 150 LLD--TIGGALSFLMSGMSPRSSIFFFSFATIKTVDDHCGL---WLPGNLFHVFFKNNTA 204
            L   TI G     ++G    +   +     ++TV+ HCG    W P N   ++    + 
Sbjct: 164 FLGFATIVGP---AITGPHLITLWLWMVLRVLETVEAHCGYHFPWSPSNFLPLY--GGSD 218

Query: 205 YHDVHHQ-LYGSKYNFSQPFFVMWDRILGTYMPYSLEKKEGGGFEVRPTKECKDD 258
           +HD HH+ LY    N+S  F  M DRI GT + Y   K      EV  + E K  
Sbjct: 219 FHDYHHRLLYTKSGNYSSTFTYM-DRIFGTDIGYRKLKALKNA-EVEYSSEQKKQ 271


>IMGA|Medtr5g036470.1 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 15194182-15197805 F
           EGN_Mt090430 20090702
          Length = 271

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 16/210 (7%)

Query: 30  GFFDNYRLHTKQDEDEKNLVSKSTVFKGVLLQQSIQAVVAILLFTVTGNDSQADTYPQPS 89
           G+   Y++  K +  E        + + +L    +   V I  + V        + P PS
Sbjct: 48  GWLSKYKIQAKNNSPEAQ---DKCIVRLLLYHFGVNLPVMIFSYPVFRYMGMQSSLPLPS 104

Query: 90  LIVLARQFVTAMLVMDTWQYFMHRYMHHNKFLYKHIHSQHHRLVVPYAFGALYNHPLEGL 149
             ++  Q +   ++ D   Y+ HR +H  K+LYKHIHS HH    P+   + Y HP E L
Sbjct: 105 WNIILTQIMFYFILEDFIFYWGHRILH-TKWLYKHIHSVHHEYATPFGLTSEYAHPAEIL 163

Query: 150 LLD--TIGGALSFLMSGMSPRSSIFFFSFATIKTVDDHCGL---WLPGNLFHVFFKNNTA 204
            L   TI G     ++G    +   +     ++TV+ HCG    W P N   ++    + 
Sbjct: 164 FLGFATIVGP---AITGPHLITLWLWMVVRVLETVEAHCGYHFPWSPSNFLPLY--GGSD 218

Query: 205 YHDVHHQ-LYGSKYNFSQPFFVMWDRILGT 233
           +HD HH+ LY    N+S  F  M DRI GT
Sbjct: 219 FHDYHHRLLYTKSGNYSSTFTYM-DRIFGT 247


>IMGA|Medtr5g036470.2 Sterol desaturase
           chr05_pseudomolecule_IMGAG_V3 15196033-15197805 F
           EGN_Mt090430 20090702
          Length = 217

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 13/199 (6%)

Query: 41  QDEDEKNLVSKSTVFKGVLLQQSIQAVVAILLFTVTGNDSQADTYPQPSLIVLARQFVTA 100
           Q ++         + + +L    +   V I  + V        + P PS  ++  Q +  
Sbjct: 2   QAKNNSPEAQDKCIVRLLLYHFGVNLPVMIFSYPVFRYMGMQSSLPLPSWNIILTQIMFY 61

Query: 101 MLVMDTWQYFMHRYMHHNKFLYKHIHSQHHRLVVPYAFGALYNHPLEGLLLD--TIGGAL 158
            ++ D   Y+ HR +H  K+LYKHIHS HH    P+   + Y HP E L L   TI G  
Sbjct: 62  FILEDFIFYWGHRILH-TKWLYKHIHSVHHEYATPFGLTSEYAHPAEILFLGFATIVGP- 119

Query: 159 SFLMSGMSPRSSIFFFSFATIKTVDDHCGL---WLPGNLFHVFFKNNTAYHDVHHQ-LYG 214
              ++G    +   +     ++TV+ HCG    W P N   ++    + +HD HH+ LY 
Sbjct: 120 --AITGPHLITLWLWMVVRVLETVEAHCGYHFPWSPSNFLPLY--GGSDFHDYHHRLLYT 175

Query: 215 SKYNFSQPFFVMWDRILGT 233
              N+S  F  M DRI GT
Sbjct: 176 KSGNYSSTFTYM-DRIFGT 193


>IMGA|Medtr8g106630.1 Sterol desaturase
           chr08_pseudomolecule_IMGAG_V3 23972783-23976296 E
           EGN_Mt090430 20090702
          Length = 303

 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 11/162 (6%)

Query: 86  PQPSLIVLARQFVTAMLVMDTWQYFMHRYMHHNKFLYKHIHSQHHRLVVPYAFGALYNHP 145
           P PS   +  Q +   LV D   Y++HR++H NK+ Y+ IH  HH    P  F A Y H 
Sbjct: 119 PLPSGFEILSQLLVYFLVEDYTNYWIHRFLH-NKWGYEKIHRVHHEYQAPIGFAAPYAHW 177

Query: 146 LEGLLLDTIGGALSFLMSGMSPRSSIFFF---SFATIKTVDDHCGLWLPGN-LFHVFFKN 201
            E L+L    G  SFL   M P   I F+   +   ++ +D H G   P N   ++ F  
Sbjct: 178 AEILIL----GIPSFLGPAMVPGHMITFWLWIALRQVEAIDTHSGYDFPWNPTKYIPFYG 233

Query: 202 NTAYHDVHHQLYG-SKYNFSQPFFVMWDRILGTYMPYSLEKK 242
              +HD HH + G S+ NF+   F   D I GT   +  +KK
Sbjct: 234 GAEHHDYHHYVGGQSQSNFAS-VFTYCDYIYGTDKGFRYQKK 274