Jatropha Genome Database
- JcCA0006671.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0006671.10 - phase: 0 /TE
(1335 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 486 e-137
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 477 e-134
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 449 e-126
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 418 e-116
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 365 e-100
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 276 4e-74
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 207 2e-53
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 201 2e-51
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 192 1e-48
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 189 9e-48
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 187 3e-47
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 186 5e-47
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 185 2e-46
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 182 1e-45
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 177 3e-44
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 177 3e-44
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 161 2e-39
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 153 7e-37
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 142 9e-34
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 138 2e-32
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 134 2e-31
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 134 3e-31
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 130 4e-30
IMGA|Medtr8g128700.1 Integrase, catalytic region chr08_pseudomol... 124 3e-28
IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA po... 104 3e-22
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 101 2e-21
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 99 1e-20
IMGA|Medtr6g069750.1 Reverse transcriptase, putative chr06_pseud... 87 6e-17
IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA po... 82 2e-15
IMGA|Medtr8g012170.1 polyprotein, putative chr08_pseudomolecule_... 69 2e-11
IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H... 68 4e-11
IMGA|Medtr8g044880.1 polyprotein-like, putative chr08_pseudomole... 67 5e-11
IMGA|Medtr3g044280.1 hypothetical retrotransposon, related chr03... 67 6e-11
IMGA|Medtr5g082230.1 hypothetical retrotransposon, related chr05... 67 6e-11
IMGA|Medtr3g097190.1 copia-type polyprotein, putative chr03_pseu... 66 1e-10
IMGA|Medtr4g104320.1 hypothetical protein chr04_pseudomolecule_I... 64 6e-10
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 62 2e-09
IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA po... 62 2e-09
IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG... 59 1e-08
IMGA|Medtr3g044010.1 hypothetical protein chr03_pseudomolecule_I... 59 1e-08
IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative chr... 54 5e-07
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 54 5e-07
IMGA|Medtr4g045170.1 hypothetical protein chr04_pseudomolecule_I... 54 7e-07
IMGA|Medtr1g102700.1 hypothetical protein chr01_pseudomolecule_I... 54 8e-07
IMGA|Medtr3g097800.1 GRAS transcription factor chr03_pseudomolec... 53 1e-06
IMGA|Medtr5g099250.1 Reverse transcriptase, RNA-dependent DNA po... 52 1e-06
IMGA|Medtr3g089910.1 copia LTR rider, putative chr03_pseudomolec... 52 2e-06
IMGA|Medtr4g104330.1 hypothetical protein chr04_pseudomolecule_I... 52 2e-06
IMGA|Medtr1g076760.1 hypothetical protein chr01_pseudomolecule_I... 52 2e-06
IMGA|Medtr5g086740.1 Reverse transcriptase, RNA-dependent DNA po... 51 3e-06
IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein, chr0... 50 9e-06
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 315/912 (34%), Positives = 463/912 (50%), Gaps = 60/912 (6%)
Query: 425 LGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDL 484
LGH+S K + +S L C+ C KQK+L+F + + +H D+
Sbjct: 488 LGHVSNKRLNHMSH--LYPTLTVDNHATCDICQFAKQKKLSFPTSVSVASSKFELLHFDI 545
Query: 485 WGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLR 544
WGP V H Y LTI+DD+S W LK K EV K + L+ Q K +R
Sbjct: 546 WGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVSQHVKNFINLIHTQYHITPKVVR 605
Query: 545 TDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALPKE 604
+DNG EF N+F ++GI+ H++ TPQQNG ER + ++ R +L LP
Sbjct: 606 SDNGPEFL---LNSFYASKGIVHHKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPSS 662
Query: 605 FWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQG---KLE 661
+W+ A A +++NR +L K P ++ G D K+FG Y+ Q KL
Sbjct: 663 YWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTFKVFGSLCYSTTLQSHRTKLS 722
Query: 662 PRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPGKEXXXXXXXXXXXXX 721
RARK +F+GYA G KGY L +++ ISR V F+E++L P
Sbjct: 723 ARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEHILPYPTNPSTITTTWDYFSSD 782
Query: 722 XTEEKVEL---------------EFEIPTPSKENISSSPI--------TSEVPDSTEPDH 758
L + + P PS +N S SPI +S + + P H
Sbjct: 783 SCSASNPLPKSSTISPIIPPPFIDVDTP-PSDDNHSVSPIPQPPVIRKSSRI--TQPPTH 839
Query: 759 REDY--SIARDRPRREIKRPERYNEGNLVAYALAVAEDTVEGGEPHTYSEA--ISCPNSS 814
+DY S++ D + + NL + A A EP TY+EA C
Sbjct: 840 LQDYVCSVSDDTSFVQYPISHYLSYNNLSSSHCAFALSLDSHTEPTTYAEASKFDC---- 895
Query: 815 EWQVAMQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGY 874
W+ AMQ E+ +L TWKLV LP + + C+W+YK K G + RYKARLVAKGY
Sbjct: 896 -WKQAMQVELSALENTGTWKLVDLPPNVKPIVCRWIYKIKHHADGSIE-RYKARLVAKGY 953
Query: 875 TQKHGVDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEG 934
Q G+D+ + +SPV + T++R DV AFLHG+L+E +YM P+G
Sbjct: 954 NQIEGLDYFDTYSPVAKLTTVRTIIALAYMNNWHIHQLDVNNAFLHGDLQEDVYMIVPQG 1013
Query: 935 FVVPGKEDYVCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFV 994
+ P K + VC L KSLYGLKQ+ R+WY++ S +V H Y +S D+ ++ KK + SF
Sbjct: 1014 -ITPSKSNQVCKLIKSLYGLKQASRKWYEKLTSLLVHHHYLQSTSDHSLFIKK-TYTSFT 1071
Query: 995 YLLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQR 1054
LL+YVDD++I S +++K L S E+KDLG K LG+E+ S+ + L QR
Sbjct: 1072 ALLVYVDDVIITGTSLSEFQDIKAILHSALEIKDLGQLKYFLGLEVA--HSSQGISLCQR 1129
Query: 1055 NYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVP-YSSAVGSLMYAM 1113
Y +L +KP STP KL +D P S +P Y +G L+Y +
Sbjct: 1130 KYCLDLLTDIGFLAAKPASTPSDPSCKLHADGGP-------PFSDIPSYRRLIGRLIY-L 1181
Query: 1114 VCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVIGYV 1173
TRP + A +S+++++P ++H+ A I RYLK S GL F R+ + + GY
Sbjct: 1182 TNTRPYITFATQQLSQFLNSPTEKHYIAATRILRYLKKSPGQGLFFPRD--SSLFLSGYS 1239
Query: 1174 DSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRG 1233
D+D+AG LD RRS+SG F L +S ISWK Q V+ S++EAEY A+ E WL
Sbjct: 1240 DADWAGCLDSRRSISGQCFFLGHSLISWKTKKQLTVSRSSSEAEYRALGAATCELQWLLY 1299
Query: 1234 LVSDLGLTQ-DVVTVFCDSQSAIHLTKNQMYHERTKHIDVRQYFIRDVVANGKIIVNKIA 1292
L+ DL +T + ++CD+QSA+H+ N ++HERTKH+++ + +R+ + + + +
Sbjct: 1300 LLHDLHVTTVKLHVLYCDNQSALHIAANPVFHERTKHLEIDCHLVREKLQACIMKLLPVT 1359
Query: 1293 TTHNPADMLMKP 1304
+ AD KP
Sbjct: 1360 SADQLADFFTKP 1371
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 308/911 (33%), Positives = 459/911 (50%), Gaps = 63/911 (6%)
Query: 417 VTKLWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVT 476
V LWH RLGH+S + M +S N + C+ C KQK L F +
Sbjct: 491 VAALWHFRLGHLSNQRMIKMSHLYPSIVHNNR--DVCDICHFSKQKHLPFSSSLSHASTN 548
Query: 477 LDYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQT 536
+ +H D+WGP + GH Y LTI+DD S +W LK K EV K + +++ Q
Sbjct: 549 FELLHFDIWGPISISSVHGHRYFLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQF 608
Query: 537 GKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCML 596
K +R+DNG EF DF + + GI+ ++ TPQQNG ER + ++ R +L
Sbjct: 609 HVTPKYVRSDNGPEFLLNDFYS---SHGIIHQKSCVETPQQNGRVERKHQHILNVGRALL 665
Query: 597 SNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHIN 656
LP FW+ A A +L+NR P L + P V D +++F
Sbjct: 666 YQSKLPPSFWSYAILHAVFLINRVPTHVLHNQSPYHVLFHKLPD---IQLF--------- 713
Query: 657 QGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPGKEXXXXXXXX 716
+ KL+PRARK +F+GY SG KGY L+ +++ +SR V F+EN+L
Sbjct: 714 KSKLQPRARKSLFLGYKSGYKGYHLFDLSTREIFVSRHVIFHENILPYTFTTSSTTPSWD 773
Query: 717 XXXXXXTEEKVELEFEIPTPSKENISSSPITSEVPDSTEPDHREDYSIARDRPRREIKRP 776
TE TPS +S P T S H +S R++ +
Sbjct: 774 YFSPSTTETSHSPNNTPSTPS----ASLPHTQSSSPSVPVSHLPRHS-TRNKISPSYLQD 828
Query: 777 ERYNEGNLVAYALA--VAEDTVEG------------GEPHTYSEAISCPNSSE-WQVAMQ 821
N N Y ++ ++ + + EP TY+EA N E WQ AMQ
Sbjct: 829 YVCNSINSTTYPISHYLSHNKLSSHHSSYVLSLHTHNEPKTYAEA----NKHECWQKAMQ 884
Query: 822 EEIESLHKNDTWKLVKLPKGQRVVGCKWVYK-KKEGNPGVEDARYKARLVAKGYTQKHGV 880
E+++L + TW V LP + +GC+WV+K K+ + +E RYKARLVAKGYTQ G+
Sbjct: 885 VELQALEQTGTWNFVDLPPNVKPIGCRWVFKIKRHADGSIE--RYKARLVAKGYTQVEGL 942
Query: 881 DFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEGFVVPGK 940
D+ + FSPV + T++R+ DV AFLHG+L+E +YM P G +
Sbjct: 943 DYFDTFSPVAKLTTVRLIIALASINHWHLHQLDVNNAFLHGDLQENVYMTLPPG-ISAKH 1001
Query: 941 EDYVCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFVYLLLYV 1000
+ VC L KSLYGLKQ+ R+WY + S +++H Y ++ D+ ++ KK + S+ LL+YV
Sbjct: 1002 SNTVCKLNKSLYGLKQASRKWYDKLTSILLKHQYTQAHSDHSLFTKK-TGTSYTILLVYV 1060
Query: 1001 DDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKV 1060
DD+++A + +K L + F++KDLG K LG+E+ + + L Q+ Y +
Sbjct: 1061 DDIILAGDSLEEFQYIKSILDTLFKIKDLGQLKFFLGLEVAHSQLG--ISLCQKKYCLDL 1118
Query: 1061 LERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVP-YSSAVGSLMYAMVCTRPD 1119
L SKP STP KL D + +P Y +G L+Y + TRPD
Sbjct: 1119 LADSGTIGSKPASTPSDPSLKLHKDGALPYED-------IPSYRRLIGRLLY-LNTTRPD 1170
Query: 1120 LAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVIGYVDSDYAG 1179
+ +S+++S P H A + RYLK GL F RN +P + GY D+D+AG
Sbjct: 1171 ITYITQQLSQFLSAPTHTHHSAALRVLRYLKNCPGKGLFFPRN--SPLQLQGYSDADWAG 1228
Query: 1180 DLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRGLVSDLG 1239
LD RRS+SG F L NS ISW+ Q V+ S++EAEY A+ E WL L+ DL
Sbjct: 1229 CLDTRRSISGQCFFLGNSLISWRTKKQVTVSRSSSEAEYRALASATCELQWLIYLLQDLH 1288
Query: 1240 LT-QDVVTVFCDSQSAIHLTKNQMYHERTKHIDVRQYFIRDVVANGKIIVNKIATTHNPA 1298
+T + +FCD+QSA+H+ N ++HERTKH+++ + +R+ + +G + + +++ A
Sbjct: 1289 VTCTKLPVLFCDNQSALHIAANPVFHERTKHLEIDCHIVREKLHSGILKLLPVSSKEQVA 1348
Query: 1299 DMLMK---PDP 1306
D K P P
Sbjct: 1349 DFFTKSLHPQP 1359
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 328/1036 (31%), Positives = 487/1036 (47%), Gaps = 131/1036 (12%)
Query: 343 LTGVRHVPDLKRNLISLGTL-ESLGC--KYAAEGGVLKVSKGALILMKANRSGSLYVLQG 399
L V + P+ NLIS+ L ESL C ++ + +++ + ++ A + LY
Sbjct: 439 LNHVLYSPNFLLNLISVAKLCESLTCFFHFSLDKCLIQDQQSLKMIGLAKQMDGLYKFYP 498
Query: 400 STVISSVTVSLFMSDSDVTK------------------LWHMRLGHMSEKGMTILSKRGL 441
S+ SS + LF S + LWH RLGH+S++ + LS L
Sbjct: 499 SS--SSCNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQRLQTLSL--L 554
Query: 442 LCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLT 501
C+ C K K L F
Sbjct: 555 YPSIKIDNKAICDLCHFAKHKHLPFTS--------------------------------- 581
Query: 502 IIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCE 561
+D S +W LK K EV + K + +++N K +RTDNG EF +
Sbjct: 582 --NDHSRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFM---LSTLYS 636
Query: 562 NEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSP 621
+ GI+ ++ TPQQNG ER + ++ R +L LP +W A A +L+NR P
Sbjct: 637 SHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLINRVP 696
Query: 622 HTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQG---KLEPRARKCIFIGYASGVKG 678
+L+ + P V D S K+FGC YA Q KL+ RARK IFIGY SG KG
Sbjct: 697 TPTLNNQSPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQSGYKG 756
Query: 679 YRLWCPELKKVIISRDVTFNENVLILPGKEXXXXXXXXXXXXXXTEEKVELEFEIPTPSK 738
+ L+ +++ ISR VTF+EN L P + + + PTP
Sbjct: 757 FTLYDLHSREIFISRHVTFHENFLPYPHTSSST-----------SPDWQYFSYFHPTPVA 805
Query: 739 ENISSSPITSEV---PDSTEPDHREDYSIARDRPR---REIKRP---ERYNEGNLVAYAL 789
N+ S PI ++ + I PR R + P + Y N+ A+
Sbjct: 806 PNLPSPPIIDDIIAPDHPSPDPTPPTSPILPIVPRHSTRNVTAPSYLQDYICNNIHAFTY 865
Query: 790 AVAEDTVE----------------GGEPHTYSEA--ISCPNSSEWQVAMQEEIESLHKND 831
+ EP +Y+EA + C W+ AMQ E+++L K
Sbjct: 866 PITHSLSHHHLSNSRSFFVMSLHTQPEPKSYAEASKLDC-----WKHAMQVELQALEKTG 920
Query: 832 TWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHGVDFNEVFSPVVR 891
TWKLV LP + +GC+W+YK K G + RYKARLVAKGY Q G+D+ + +SPV +
Sbjct: 921 TWKLVDLPPNVKPIGCRWIYKVKFHADGTVE-RYKARLVAKGYNQIEGLDYLDTYSPVAK 979
Query: 892 HTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEGFVVPGKEDYVCHLKKSL 951
T++R+ DV AFLHG+L+E +YM P G + K + VC L KSL
Sbjct: 980 LTTVRLVIALSSINNWHLHQLDVNNAFLHGDLQEDVYMMVPPG-IKSSKLNQVCKLTKSL 1038
Query: 952 YGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFVYLLLYVDDMLIAARDKS 1011
YGLKQ+ R+WY++ S + + Y ++ D ++ KK S SF LL+YVDD+++A S
Sbjct: 1039 YGLKQASRKWYEKLTSVLFDQHYTQATSDYSLFVKKTST-SFTVLLVYVDDIILAGNSIS 1097
Query: 1012 LIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKVLERFNMSNSKP 1071
+K L S F++KDLG K LG+E+ + + L QR Y +L SKP
Sbjct: 1098 EFSHIKSILDSLFKIKDLGQLKYFLGIEVAHSKLG--ISLCQRKYCLDLLADIGSLGSKP 1155
Query: 1072 VSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSS-AVGSLMYAMVCTRPDLAQAVSVVSRY 1130
+STP + KL D VP VG L+Y + TRPD+ +S++
Sbjct: 1156 ISTPSDSSIKLHLD-------SSSPFEDVPACRRLVGRLLY-LNNTRPDITFITQQLSQF 1207
Query: 1131 MSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNK-VNPNIVIGYVDSDYAGDLDKRRSLSG 1189
+S P + H A + +YLK GL F R+ +N + G+ D+D+AG +D RRS+SG
Sbjct: 1208 LSQPTQAHHSAALRVLKYLKSCPGKGLFFPRSSSLN---LQGFSDADWAGCIDTRRSISG 1264
Query: 1190 YVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRGLVSDLGLT-QDVVTVF 1248
F L NS ISW+ Q V+ S++EAEY A+ E W+ L+ DL T + ++
Sbjct: 1265 QCFFLGNSLISWRTKKQITVSKSSSEAEYRALASATCELQWILYLLKDLHTTCPKLPVLY 1324
Query: 1249 CDSQSAIHLTKNQMYHERTKHIDVRQYFIRDVVANGKIIVNKIATTHNPADMLMK---PD 1305
CD+QSAIH+ N ++HERTKH+++ + IRD + +G + + +++ AD K P
Sbjct: 1325 CDNQSAIHIANNPVFHERTKHLEIDCHLIRDKLQSGVLKLLTVSSQDQVADFFTKALLPK 1384
Query: 1306 PNLKFKHCLDLISVHQ 1321
P L LI+++Q
Sbjct: 1385 PFNILLSKLGLINIYQ 1400
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/791 (34%), Positives = 397/791 (50%), Gaps = 52/791 (6%)
Query: 541 KRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVA 600
K +R DNG EF DF A + GI+ H++ TPQQNG ER + ++ VR +L
Sbjct: 459 KTIRIDNGPEFMLKDFYA---SHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSK 515
Query: 601 LPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQG-- 658
LP FW+ A A +L+NR L + P V K+FGC YA Q
Sbjct: 516 LPPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHR 575
Query: 659 -KLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPGKEXXXXXXXXX 717
KL+ RARK IF+GY SG KGY L+ +++ ISR V+F+E ILP +
Sbjct: 576 TKLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHET--ILPYHKNPSSTTADW 633
Query: 718 XXXXXTEE-------KVELEFEIPTPSKENISSSPITSEVPDS----------------T 754
++ V + IP + + S+ + P T
Sbjct: 634 NYYPSSQSYSHDQSPNVNHQVHIPAVIDDILPSTHVLPPSPPYDSPPIHVSPRRSNRVRT 693
Query: 755 EPDHREDYSIARDRPRREIKRPERYNEGNLVAYALAVAEDTVEGGEPHTYSEAISCPNSS 814
P H +DY + N N+ + EP TY EA
Sbjct: 694 APLHLQDY-VCNSVHSTTYPLSHYINYNNISTNHASFISSLQTTPEPTTYVEA---SKHD 749
Query: 815 EWQVAMQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGY 874
W AMQ E+ +L K TW +V LP + +GC+W+YK K G + RYKARLVAKGY
Sbjct: 750 CWNKAMQAELLALEKTGTWDIVDLPAYVKPIGCRWIYKVKHNADGSIE-RYKARLVAKGY 808
Query: 875 TQKHGVDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEG 934
TQ G+D+ E +SPV + T++R+ DV AFLHGEL+E +YM P G
Sbjct: 809 TQIEGLDYFETYSPVAKLTTVRLVIALASIHNWHLHQLDVNNAFLHGELQEDVYMILPPG 868
Query: 935 FVVPGKEDYVCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFV 994
+ K VC LKKSLYGLKQ+ RQWY++ S +++ Y ++ D+ ++ KK S+ SF
Sbjct: 869 INI-AKPHQVCKLKKSLYGLKQASRQWYEKLTSVLIQQHYIQASSDHSLFIKK-SSDSFT 926
Query: 995 YLLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQR 1054
LL+YVDD+++A + +K L + F++KDLG K LG+E+ + LY QR
Sbjct: 927 ILLVYVDDIILAGTSLLEFQNIKSILDTSFKIKDLGQLKYFLGIEVAHSKLGISLY--QR 984
Query: 1055 NYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVP-YSSAVGSLMYAM 1113
Y +L SKP+STP KL D ++ +P Y VG L+Y +
Sbjct: 985 KYCLDLLHDSGHIGSKPISTPSDPSTKLHHDTSTPYDD-------IPAYRRLVGRLLY-L 1036
Query: 1114 VCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVIGYV 1173
TRPD+ +S+++SNP H A RYLK GL F RN + + G+
Sbjct: 1037 NNTRPDITFITQQLSQFLSNPTIAHHNAALRTLRYLKSCPGKGLFFPRN--SSLTLQGFS 1094
Query: 1174 DSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRG 1233
D+D+AG LD R+S++G F L NS ISW+ Q+ V+ S++EAEY A+ E WL
Sbjct: 1095 DADWAGCLDTRKSVTGQCFFLGNSLISWRTKKQTTVSRSSSEAEYRALASATCEIQWLLY 1154
Query: 1234 LVSDLGLT-QDVVTVFCDSQSAIHLTKNQMYHERTKHIDVRQYFIRDVVANGKIIVNKIA 1292
L++DL +T ++CD+QSA+H+ N ++HERTKH+++ + +R+ + G + + ++
Sbjct: 1155 LLNDLHITCSKPPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKLQAGVLKLLPVS 1214
Query: 1293 TTHNPADMLMK 1303
+ AD K
Sbjct: 1215 SQDQIADFFTK 1225
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/740 (31%), Positives = 347/740 (46%), Gaps = 103/740 (13%)
Query: 458 LGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKH 517
+ +Q RL F H T + +H D+WGP + Y +T++DDFS W L
Sbjct: 1 MARQSRLPFPPKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSC 60
Query: 518 KDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQ 577
K F K + +++ENQ VK +R+DNGLEF + F +++GI+ ++ TPQQ
Sbjct: 61 KSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQ 120
Query: 578 NGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGN 637
NGV ER + ++E R +L LP ++W+E
Sbjct: 121 NGVVERKHKFILETARALLFQSKLPVKYWSE----------------------------- 151
Query: 638 PVDYSNLKIFGCPAYAHINQGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTF 697
++ K +P+ +F+GY KGY++ +K+ +SRDV F
Sbjct: 152 -----------------FHRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRDVIF 194
Query: 698 NENVLILPGKEXXXXXXXXXXXXXXTEEKVELEFEIPTPSKENISSSPITSEVPDSTEPD 757
+E + + + ++ S + ++SP +ST P
Sbjct: 195 HETIFPFAMSKDPTHFPKFPFHCVSLHD-YPTSYDDQDYSSKETTTSPTHITPENSTSPT 253
Query: 758 H---REDYSIARDRPRREIKRPERYNEGNLVAYALAVAEDTVEGGEP------------- 801
H SI + R + + + Y L Y V TV +P
Sbjct: 254 HITPENSTSIPQLRRSQRLHKTPTY----LTDYVHNVPSSTVSNSQPPQPHSLPLNALFT 309
Query: 802 --HTYSEAI--------------SC-PNSSE-------WQVAMQEEIESLHKNDTWKLVK 837
H S + C PNS E WQ AM +E +LH N+TW L
Sbjct: 310 LKHYVSPDVFSFDSQSFIMNISHDCEPNSYEEASMDPAWQKAMTQEFLALHDNNTWTLTN 369
Query: 838 LPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHGVDFNEVFSPVVRHTSIRV 897
LPK ++ VGC+WVYK K G + RYKARLV KGYTQ HG+D+ E FSPVV+ T++R
Sbjct: 370 LPKDKKSVGCRWVYKVKHKADGSVE-RYKARLVVKGYTQHHGIDYTETFSPVVKMTTVRT 428
Query: 898 XXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEGFVVPGKEDYVCHLKKSLYGLKQS 957
DV AFLHG+L E++YM P G P K D VC L KSLYGLKQ+
Sbjct: 429 LIVAAAKKQWNIHQLDVNNAFLHGDLHEEVYMDIPPGLATPHK-DLVCKLNKSLYGLKQA 487
Query: 958 PRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFVYLLLYVDDMLIAARDKSLIKELK 1017
RQWY++ + GY S +D +++KK S V+L +YVDD+L+ D + I ELK
Sbjct: 488 SRQWYEKLTEALHTRGYEHSPHDYSLFYKK-RGASNVFLGVYVDDILLTGTDTNEIDELK 546
Query: 1018 DQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKVLERFNMSNSKPVSTPLA 1077
L ++F++KDLG LG+E+L + G L +SQR ++ +L+ FN + P+S+PL
Sbjct: 547 RFLDNQFKIKDLGRLHYFLGLEVLY-KDDGIL-VSQRKFVLDLLKEFNCDHMAPLSSPLD 604
Query: 1078 AHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMSNPGKE 1137
+ KL +S+E K Y +G L + + TR DLA V ++S+YM +P +
Sbjct: 605 PNIKL------RSHEGKVLDDPTYYRKLIGKLNF-LTHTRLDLAYGVQLLSQYMQDPREP 657
Query: 1138 HWQAVKWIFRYLKGSVDTGL 1157
H A + RYLK G+
Sbjct: 658 HLHAAFHMLRYLKKDPTLGV 677
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 276 bits (707), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 299/665 (44%), Gaps = 97/665 (14%)
Query: 342 NLTGVRHVPDLKRNLISLGTL-ESLGC--KYAAEGGVLKVSKGALILMKANRSGSLYVLQ 398
+LT V + P+ K NLIS+ + +SL C + + V++ ++ ++S LY L
Sbjct: 402 HLTHVLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLS 461
Query: 399 GSTVISSVTVS----------------------------LFMSDSDVTKLWHMRLGHMSE 430
V + + + S + LWH RLGH+S
Sbjct: 462 MHFVNQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSN 521
Query: 431 KGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRV 490
+ ++ +S+ L C+ C + K+L F +H D+WGP +
Sbjct: 522 QRLSTMSR--LYPSIIVDNKAACDICHFARHKKLPFPHSSSHANSKFQLLHFDIWGPLAI 579
Query: 491 PLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLE 550
GH Y LTI+DD + +W LK K EV K + L+ENQ K +RTDNG E
Sbjct: 580 NYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSE 639
Query: 551 FCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAA 610
F DF A ++GI+ R+ TPQQNG ER + ++ R +L LP FW+ A
Sbjct: 640 FLLHDFYA---SKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAF 696
Query: 611 STACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQG---KLEPRARKC 667
A +L+NR P L + P ++ + D + K+FGC YA Q KLE RARK
Sbjct: 697 LHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKS 756
Query: 668 IFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPGKEXXXXXXXXXXXXXXTEEKV 727
+F+GY SG KG L+ +++ ISR V F+E +LP K +
Sbjct: 757 VFLGYKSGFKGSVLYDLHTREIFISRHVVFHE--CVLPYKSNSSPQSHDWEYFTSFSTPL 814
Query: 728 ELEFEIPTPSKENISS-SPITSEVP--------------------------DSTEPDHRE 760
+L PS + S S IT VP + T P + +
Sbjct: 815 DL------PSGTDTSPHSAITDIVPYTSPTPTSTSSIIDIPPPLPTRHSSRNKTPPSYLK 868
Query: 761 DYSIARDRPRREIKRPERYNEGNLVAY----------ALAVAEDTVEGGEPHTYSEAISC 810
D+ A + ++ N V+Y L++ T EP +Y+EA
Sbjct: 869 DFICAN---KSSASVNSLHSISNFVSYHNISNSHSHFILSLHAHT----EPKSYTEA--- 918
Query: 811 PNSSE-WQVAMQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARL 869
N E W+ AMQ E+ +L TWK++ LP + +GC+W+YK K G + RYKARL
Sbjct: 919 -NKFECWRQAMQVELTALENTGTWKIIDLPSNAKPIGCRWIYKVKHHADGTIE-RYKARL 976
Query: 870 VAKGYTQKHGVDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYM 929
VAKGY Q G+D+ + +SPV +HT+IR+ DV AFLHG+L+E +YM
Sbjct: 977 VAKGYNQVEGLDYFDTYSPVAKHTTIRLVLALASLNNWHLHQLDVNNAFLHGDLQEDVYM 1036
Query: 930 QQPEG 934
P G
Sbjct: 1037 DIPPG 1041
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 194/723 (26%), Positives = 306/723 (42%), Gaps = 192/723 (26%)
Query: 592 VRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPA 651
VR ML +P EFW A +TA Y++NR P + K+PEE+W+ SNLK+FG
Sbjct: 2 VRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIF 61
Query: 652 YAHI---NQGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDV------------- 695
Y H+ + KLE + I +GY YRL KK+ I+RDV
Sbjct: 62 YKHVPDSRRKKLEDKTEAMILVGY-HNTGAYRLLDLHSKKISITRDVKVLEEEYWDWNSN 120
Query: 696 ---TFNENVLILPGKEXXXXXXXXXXXXXXTEEKVELEFEIPTPSKENISSSPITSEVPD 752
+ +NV+I KE + E + S ++ E P
Sbjct: 121 ECSVYEKNVIIENKKESDELL-----------------------TNEEVISEEVSYEEPT 157
Query: 753 STEPDHREDYSIARDRPRREIKRPERYNEGNLVAYALAVAEDTVEGGEPHTYSEAISCPN 812
+ R + R + + E ++G LV +A+ V +
Sbjct: 158 TIARPQRNKQMLRRLQDCQVTGDDEIGSDGELVHFAMLVDTKPLY--------------- 202
Query: 813 SSEWQVAMQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAK 872
+++S KN TW+L+KL G++ + KWV+K K NP + ++KARL
Sbjct: 203 ----------KLKSSGKNQTWELIKLTDGKKAIDVKWVFKLK-LNPEGKIVKHKARL--- 248
Query: 873 GYTQKHGVDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQP 932
V FL +
Sbjct: 249 -----------------------------------------VARVFL-----------KK 256
Query: 933 EGFVVPGKEDY---VCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFS 989
EGF DY V L K+LYGLKQ+PR W KR + F VE G+ + ++ VY K
Sbjct: 257 EGF------DYTEVVFKLNKALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVK--- 307
Query: 990 NGSFVYLLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKL 1049
SE G + I+ +EILR + L
Sbjct: 308 -------------------------------GSE------GTSLLIICLEILR--TTKGL 328
Query: 1050 YLSQRNYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYS---SAV 1106
L+Q Y ++ ++FNM L + ++ + NE KE+ V + +
Sbjct: 329 ILNQTKYDTEIQKKFNM---------LDFNSSITLAYANNINEVKEEDKGVDPTILRRLI 379
Query: 1107 GSLMYAMVCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNP 1166
G L Y + +R D++ +V +VS++MSNP K H+ A K I RY+ G++ G++F +
Sbjct: 380 GLLRY-LCQSRLDISYSVGIVSKFMSNPLKTHFLAAKKIIRYIHGTLQYGILFPEAQETE 438
Query: 1167 NI-VIGYVDSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGV 1225
+ +I Y D+D+ D RR + ++F L + ISW + Q IVALS+ E EY+ +
Sbjct: 439 QLSMIDYSDADWCRDKRDRRRTTSFLFMLQGAPISWSSKKQPIVALSSCEVEYVVGSSAA 498
Query: 1226 KEAIWLRGLV--SDLGLTQDVVTVFCDSQSAIHLTKNQMYHERTKHIDVRQYFIRDVVAN 1283
+A WL+ ++ S + L Q + + D++ AI+L KN + H ++KHI+ + +++RD V
Sbjct: 499 CQANWLQNVLEQSMIKLKQP-IKLLIDNKYAINLAKNHISHGKSKHIETKFHYLRDQVNK 557
Query: 1284 GKI 1286
KI
Sbjct: 558 CKI 560
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 169/303 (55%), Gaps = 14/303 (4%)
Query: 820 MQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHG 879
MQ EI +L + TWK+V LP + +GC+W++K K G + RYKARLVAKGY Q G
Sbjct: 1 MQSEITALEQTGTWKIVDLPPAVKPIGCRWIFKIKHNVDGSIE-RYKARLVAKGYNQIEG 59
Query: 880 VDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEGFVVPG 939
+D+ + +SPV + T++R DV AFLHGEL+E +YM P G V
Sbjct: 60 LDYFDTYSPVAKLTTVRFIIALASINHWHLHQFDVNNAFLHGELQEDVYMIIPPG-VPHS 118
Query: 940 KEDYVCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFVYLLLY 999
+D VC L KSLYGL+Q+ +WY++ + ++ GY ++ D ++ K ++ SF LL+Y
Sbjct: 119 HQDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQAASDASLF-IKHTHSSFTILLVY 177
Query: 1000 VDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEK 1059
VDD+++A S +K L F++KD+G K LG+E+ +S + L QR Y
Sbjct: 178 VDDVILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSKSG--ISLCQRKYCLD 235
Query: 1060 VLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVP-YSSAVGSLMYAMVCTRP 1118
+LE ++ SKP++TP KL +D P +P Y +G L+Y + TRP
Sbjct: 236 LLEDSGLTGSKPMNTPSDPSIKLHNDSAP-------SFPDIPAYRRLIGRLLY-LNTTRP 287
Query: 1119 DLA 1121
D+
Sbjct: 288 DIT 290
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 203/463 (43%), Gaps = 44/463 (9%)
Query: 418 TKLWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTL 477
+ LWH RLGH+S K + +S+ L C+ C KQK+L F I +
Sbjct: 489 SALWHFRLGHVSPKRLIHMSQ--LYPTLTVDVHATCDICHFAKQKKLPFSNSISVASIKF 546
Query: 478 DYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTG 537
+ +H D+WGP + H Y LTI+DD+S VW LK K EV K + L++ Q
Sbjct: 547 ELLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVLLKSKSEVSQHVKNFINLIQTQYN 606
Query: 538 KKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLS 597
K +R+DNG EF ++F ++GI+ HR+ TPQQNG ER + ++ R +L
Sbjct: 607 ITPKTVRSDNGPEFL---LHSFYASKGIVHHRSCVETPQQNGRVERKHQHILNVGRALLY 663
Query: 598 NVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYA---H 654
LP +W+ A A +++NR +L K P ++ K+FG Y+ H
Sbjct: 664 QSKLPVSYWSYALLHATFIINRVTSPTLHNKSPYQLLHDTIPAEHIFKVFGSLCYSTTLH 723
Query: 655 INQGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPGKEXXXXXX 714
++ KL RARK +F+GY G KGY L +++ ISR V F E++L P
Sbjct: 724 SHRTKLSARARKSVFLGYTVGFKGYVLLDIHTREIHISRHVQFYEHILPYPATSSSITTA 783
Query: 715 ---XXXXXXXXTEEKVELEFEIPT--PSKENISSSPITSE-----------------VPD 752
+ + +P+ P ++ P E + +
Sbjct: 784 WEYFSSDTCSSSNPNSDTPITLPSSPPPFIDVDIPPTDHEHPISSIPSPSPPIIRKSIRN 843
Query: 753 STEPDHREDY-------SIARDRPRREIKRPERYNEGNLVAYALAVAEDTVEGGEPHTYS 805
+ P H +DY S+ D Y+ NL + A A EP TY+
Sbjct: 844 THPPTHLQDYVCNTSTASVLSDNSFVHHPISHYYSYNNLSSSHCAFAMSLDSHTEPTTYA 903
Query: 806 EA--ISCPNSSEWQVAMQEEIESLHKNDTWKLVKLPKGQRVVG 846
EA C W AM+ E+ +L TW+LV LP + +G
Sbjct: 904 EASKFDC-----WNQAMKVELSALENTGTWRLVDLPPNVKPIG 941
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 204/456 (44%), Gaps = 47/456 (10%)
Query: 453 CEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWA 512
C+ C + K+L F +H D+WGP + GH Y LTI+DD + +W
Sbjct: 16 CDVCHFARHKKLPFSHSSSHASSKFQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWI 75
Query: 513 YFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVA 572
LK K EV K + +++ENQ K +RTDNG EF +F A ++GI+ +
Sbjct: 76 ILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEFLLHEFYA---SKGILHQSSCV 132
Query: 573 GTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEE 632
TPQQNG ER + ++ R +L LP FW+ A A +L+NR L P
Sbjct: 133 ETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYH 192
Query: 633 VWTGNPVDYSNLKIFGCPAYAHINQG---KLEPRARKCIFIGYASGVKGYRLWCPELKKV 689
+ +P D + K+FGC YA Q KLE RARK +F+GY G KGY L+ +++
Sbjct: 193 LLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREI 252
Query: 690 IISRDVTFNENVLILPGKEXXXXXXXXXXXXXXTEEKVELEFEIPTPSKENISSSPITSE 749
ISR V F+E V LP K E + PS +IS SP T E
Sbjct: 253 FISRHVVFHECV--LPYKSISSSQSLDW------EYFTSISSPPIIPSVSDISHSPSTIE 304
Query: 750 VP--------------------------DSTEPDHREDYSIARDRPRREIKRPERYNEGN 783
+ P + +DY I + + Y+ N
Sbjct: 305 SVPHTQPTTTTTPTNDPSPPPPIRCSSRNKISPSYLKDY-ICPHKSSTSVN--NLYSISN 361
Query: 784 LVAYALAVAEDTVEGGEPHTYSEAISCPNSSEWQVAMQE---EIESLHKNDTWKLVKLPK 840
V+Y + H ++E + +++++ Q E+ +L TWK++ P
Sbjct: 362 YVSYHNISNPHSHFILSLHAHNEPKTYTEANKFECWRQAMQVELTALENTGTWKIIDSPP 421
Query: 841 GQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQ 876
+ +GC+W+YK K G + RYKARLVAKGY Q
Sbjct: 422 NAKPIGCRWIYKIKHHADGTIE-RYKARLVAKGYNQ 456
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 190/403 (47%), Gaps = 55/403 (13%)
Query: 531 LMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLME 590
++ENQ K +RTDNG EF +F A ++GI+ R+ TPQQNG ER + ++
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFLLHEFYA---SKGILHQRSCVETPQQNGRVERKHQHILN 57
Query: 591 RVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCP 650
R +L LP FW+ A A +L+NR P L P + +P D + K+FGC
Sbjct: 58 IGRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCL 117
Query: 651 AYAHINQG---KLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPGK 707
YA Q KLE RARK +F+GY G KGY L+ +++ ISR V F+E V LP K
Sbjct: 118 CYASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHECV--LPYK 175
Query: 708 EXXXXXXXXXXXXXXTEEKVELEFEIPTPSKENISSSPIT-------------------S 748
E + + PS +IS SP T S
Sbjct: 176 SISSSQSLDW------EYFTSISSLLIIPSVSDISHSPSTTKYVPHTQPTTTTTPTNDPS 229
Query: 749 EVP-------DSTEPDHREDYSIARDRPRREIKRPERYNEGNLVAYALAVAEDT------ 795
P + P + +DY I + + Y+ N V+Y +
Sbjct: 230 RPPPIRCSSRNKISPSYLKDY-ICPHKSSTSVN--NLYSISNYVSYHNISNPHSHFILSL 286
Query: 796 VEGGEPHTYSEAISCPNSSE-WQVAMQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKK 854
EP TY+EA N E W+ AMQ E+ +L TWK++ P + +GC+W+YK K
Sbjct: 287 HAHNEPKTYTEA----NKFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYKIK 342
Query: 855 EGNPGVEDARYKARLVAKGYTQKHGVDFNEVFSPVVRHTSIRV 897
N RYKARLVAKGY Q G+D+ + +SPV +HT+IR+
Sbjct: 343 H-NADDTIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRL 384
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 188/374 (50%), Gaps = 54/374 (14%)
Query: 954 LKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGSFVYLLLYVDDMLIAARDKSLI 1013
++ + R+WY++ S +V HGY ++ D+ ++ K S F LL+YVDD+++A
Sbjct: 382 IRLASRKWYEKLASLLVNHGYKQASADHSLF-IKHSTTQFTALLVYVDDIILAGNSLDEF 440
Query: 1014 KELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKVLERFNMSNSKPVS 1073
+K+ L + F++KDLG K LG+E+ + + L QR Y +L + +SKPV+
Sbjct: 441 TFIKNILHNSFKIKDLGQLKYFLGLEVAHSKLG--ISLCQRKYGLDLLSDTGLLDSKPVA 498
Query: 1074 TPLAAHFKLSSDFCPQSNEEKEQLSHVP-YSSAVGSLMYAMVCTRPDLAQAVSVVSRYMS 1132
TP KL D P + +P Y VG L+Y + TRPD+ +S+++S
Sbjct: 499 TPSDPSIKLYHDDSPLYTD-------IPAYRRLVGRLLY-LNATRPDITFITQQLSQFLS 550
Query: 1133 NPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVIGYVDSDYAGDLDKRRSLSGYVF 1192
P + H+ A + RYLK GL F R+ + + GY D+D+AG D RRS+SG F
Sbjct: 551 KPTQTHYNAALRVLRYLKTCPGKGLHFPRSSLP--YIQGYSDADWAGCRDTRRSISGQCF 608
Query: 1193 TLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRGLVSDLGLTQDVVTVFCDSQ 1252
L +S ISW+ Q V+ S++EAEY A+
Sbjct: 609 FLGDSLISWRTKKQLTVSRSSSEAEYRALGAA---------------------------- 640
Query: 1253 SAIHLTKNQMYHERTKHIDVRQYFIRDVVANGKIIVNKIATTHNPADMLMK---PDP--N 1307
T N ++HERTKH+++ + +R+ +A G + + I++ + AD K P P +
Sbjct: 641 -----TSNPVFHERTKHLEIDCHIVREKLAAGIMKLLPISSKNQLADCFTKSILPQPFNS 695
Query: 1308 LKFKHCLDLISVHQ 1321
L FK L L+ +H+
Sbjct: 696 LLFK--LGLVDIHK 707
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 200/424 (47%), Gaps = 40/424 (9%)
Query: 420 LWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDY 479
LWH RLGH+S + + + ++ + C+ C + K+L F + +++ +
Sbjct: 464 LWHFRLGHLSNDRLLRMQQHFPCIKVDSNSV--CDICHYSRHKKLPFKLSMNKASHCYEL 521
Query: 480 IHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKK 539
IH D+WGP GH Y +T +DD+S W K K EV + + + + +ENQ K
Sbjct: 522 IHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCK 581
Query: 540 VKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNV 599
VK +RTDNG EF DF + ++GI + TPQQNG ER + ++ R +L
Sbjct: 582 VKTVRTDNGPEFLMPDFYS---SKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQS 638
Query: 600 ALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYA---HIN 656
LPK FW+ + A Y++NR P L K P + G+ D +N K+FGC +YA H +
Sbjct: 639 KLPKVFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNH 698
Query: 657 QGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVLILPG-KEXXXXXXX 715
+ K + RA+KC+F+GY G+KG L+ K + SR+VT++E++L K+
Sbjct: 699 RTKFDSRAQKCVFLGYKQGIKGAILYDLNHKTIFASRNVTYHEHILPYSNSKQYFQWQYH 758
Query: 716 XXXXXXXTEEKVELEFEIPTPSKENISSSPI-----TSEVPDSTE--------------- 755
E+ FE+P ++ + P + + D T+
Sbjct: 759 SNHPIIPVTEQTSSNFELPLENQSETNKEPAMHIDNNTHIQDPTQIEHEPQQLNTRKSTR 818
Query: 756 ----PDHREDY-----SIARDRPRREIKRPER--YNEGNLVAYALAVAEDTVEGGEPHTY 804
P+H DY S + ++ +I P + ++ N+ A A + EP +Y
Sbjct: 819 VSQKPNHLSDYVCNSSSDSTNQASSDILYPIKNYHSLNNISASHQKFALAITDASEPVSY 878
Query: 805 SEAI 808
EA+
Sbjct: 879 KEAM 882
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 188/380 (49%), Gaps = 33/380 (8%)
Query: 345 GVRHVPDLKRNLISLG----------TLESLGCKYAAEGGVLKVSKGALILMKANRSGSL 394
V +V + K NL+S+ T ++ C + + G LI G
Sbjct: 446 NVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELI------EGLY 499
Query: 395 YVLQGSTVISSVT----VSLFMSDSDVT-----KLWHMRLGHMSEKGMTILSKRGLLCGQ 445
++ GS V S ++L S S T LWH RLGH+S + + +
Sbjct: 500 FLNLGSQVFSQFNHQPVIALSQSSSSTTFLPQEALWHFRLGHLSNDRLLRMQQHFPCIKV 559
Query: 446 NTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDD 505
++ + C+ C + K+L F + +++ + IH D+WGP GH Y +T +DD
Sbjct: 560 DSNSV--CDICHYSRHKKLPFKLSMNKASHCYELIHFDIWGPISTHSIHGHKYFITALDD 617
Query: 506 FSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGI 565
+S W K K EV + + + + +ENQ KVK +RTDNG EF DF + ++GI
Sbjct: 618 YSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMPDFYS---SKGI 674
Query: 566 MRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSL 625
+ TPQQNG ER + ++ R +L LPK FW+ + A Y++NR P L
Sbjct: 675 EHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPLL 734
Query: 626 DFKIPEEVWTGNPVDYSNLKIFGCPAYA---HINQGKLEPRARKCIFIGYASGVKGYRLW 682
K P + G+ D +N K+FGC +YA H ++ K + RA+KC+F+GY G+KG L+
Sbjct: 735 QNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILY 794
Query: 683 CPELKKVIISRDVTFNENVL 702
K + SR+VT++E++L
Sbjct: 795 DLNHKTIFASRNVTYHEHIL 814
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 172/347 (49%), Gaps = 17/347 (4%)
Query: 340 DXNLTGVRHVPDLKRNLISLGTL-ESLGCKYAAEGGVLKVSKGALI--LMKANRSGSLYV 396
D ++ V ++P NLIS+ L CK E + + + + + A LY
Sbjct: 447 DLSIDNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKEKHGLYY 506
Query: 397 LQ----GSTVISSVTVSLFMSDSDVTK--LWHMRLGHMSEKGMTILSKRGLLCGQNTGRL 450
L+ +S+++ + + V LWH+RLGH+S M ++K +
Sbjct: 507 LETDERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMICMNK--MYSYVPVSPH 564
Query: 451 EFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKV 510
C+ C + +QK L F I K D +H D+WGP GH Y LTI+DD + V
Sbjct: 565 TACDVCQMCRQKILPFPISSRNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTILDDCTRHV 624
Query: 511 WAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRT 570
W LK+K E K + ++E Q +K+K +R+DNG EF F + +GI+ R+
Sbjct: 625 WIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFM---LREFYDKKGIIHQRS 681
Query: 571 VAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIP 630
TPQQNG ER + ++ R ++ LPK FW+ A A YL+NR P L+ K
Sbjct: 682 CVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILNNKSS 741
Query: 631 EEVWTGNPVDYSNLKIFGCPAYAH---INQGKLEPRARKCIFIGYAS 674
EV D S+LK+FGC +YA +N+ K +P+ARKC F+G+ S
Sbjct: 742 YEVLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGFKS 788
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 168/326 (51%), Gaps = 26/326 (7%)
Query: 996 LLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRN 1055
+L+YVDD++IA D I K L F MKDLG K LG+E+ R A L++ QR
Sbjct: 3 VLIYVDDLVIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLEL--ARGANGLFMCQRK 60
Query: 1056 YIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAMVC 1115
Y +L+ M + KP + P+ + KL D P ++ Y + L+Y +
Sbjct: 61 YTLDILDECKMLDCKPSTFPMEQNQKLVLDKGPTCSDPSR------YRRLISRLIY-LTI 113
Query: 1116 TRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVIGYVDS 1175
P++ +V +++ + RYLK S G++ + N ++ Y DS
Sbjct: 114 MHPEITYSVHILTMR--------------VLRYLKSSPGQGIILPKE--NDLQLVAYCDS 157
Query: 1176 DYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRGLV 1235
D+A RRS SGY+ L ++ ISWK QS V+ S++EAEY A+ + V E IWLR L+
Sbjct: 158 DWASCPLTRRSTSGYLMKLGSAPISWKTKKQSTVSKSSSEAEYRAMGQAVSEVIWLRSLL 217
Query: 1236 SDLGLTQDVVTV-FCDSQSAIHLTKNQMYHERTKHIDVRQYFIRDVVANGKIIVNKIATT 1294
S L + D TV CD+Q+A+HL N +YHERTKHI+V +FIR + G I + + T
Sbjct: 218 SSLQVHYDSPTVLLCDNQAAMHLAANPVYHERTKHIEVDCHFIRTHLQEGTISTSYVPTK 277
Query: 1295 HNPADMLMKPDPNLKFKHCLDLISVH 1320
AD+ K +F+ + VH
Sbjct: 278 KQQADIFTKALGAKQFQELTFKLGVH 303
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 109/191 (57%), Gaps = 36/191 (18%)
Query: 515 LKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGT 574
+KH+ + FK+ L+ENQ GKKVKRL+ DNGLEFC +FN FC+ EGI RH V T
Sbjct: 1 MKHRSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNT 60
Query: 575 PQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVW 634
PQQN VA+RMN TL+ER RCMLSN L + FW E
Sbjct: 61 PQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGETG------------------------ 96
Query: 635 TGNPVDYSNLKIFGCPAYAHINQGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRD 694
FGC Y +N+GKLE RA+K +F+GY GVK YR+W P +VI+SR+
Sbjct: 97 ------------FGCTVYYRVNEGKLESRAKKRVFVGYGDGVKEYRIWSPSENRVILSRN 144
Query: 695 VTFNENVLILP 705
V F+E V+ P
Sbjct: 145 VVFDEIVMFNP 155
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 167/365 (45%), Gaps = 39/365 (10%)
Query: 342 NLTGVRHVPDLKRNLISLGTL-ESLGC--KYAAEGGVLKVSKGALILMKANRSGSLYVLQ 398
+LT V + P+ K NLIS+ + +SL C + + V++ ++ ++S LY L
Sbjct: 402 HLTHVLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLS 461
Query: 399 GSTVISSVTVS----------------------------LFMSDSDVTKLWHMRLGHMSE 430
V + + + S + LWH RLGH+S
Sbjct: 462 MHFVNQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSN 521
Query: 431 KGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRV 490
+ ++ +S+ L C+ C + K+L F +H D+WGP +
Sbjct: 522 QRLSTMSR--LYPSIIVDNKAACDICHFARHKKLPFPHSSSHANSKFQLLHFDIWGPLAI 579
Query: 491 PLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLE 550
GH Y LTI+DD + +W LK K EV K + L+ENQ K +RTDNG E
Sbjct: 580 NYVHGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSE 639
Query: 551 FCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAA 610
F DF A ++GI+ R+ TPQQNG ER + ++ R +L LP FW+ A
Sbjct: 640 FLLHDFYA---SKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAF 696
Query: 611 STACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQG---KLEPRARKC 667
A +L+NR P L + P ++ + D + K+FGC YA Q KLE RARK
Sbjct: 697 LHAVFLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKS 756
Query: 668 IFIGY 672
+F+GY
Sbjct: 757 VFLGY 761
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 153 bits (386), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 147/269 (54%), Gaps = 14/269 (5%)
Query: 987 KFSNGSFVYLLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSA 1046
K ++ SF LL+YVDD+++A S + +K L S F++KDLG K +LG+E+ +
Sbjct: 4 KHTDSSFTILLVYVDDIILAGNSLSEFQHIKSILHSSFKIKDLGQLKYVLGLEVAHSKQG 63
Query: 1047 GKLYLSQRNYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVP-YSSA 1105
+ L QR Y +L NSKPVST A KL +D P + +P Y
Sbjct: 64 --ISLCQRKYCLDLLSDSGTINSKPVSTSSDASLKLHNDSSPPYED-------IPSYRRL 114
Query: 1106 VGSLMYAMVCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVN 1165
+G L+Y + TRPD+ +S+++S P + H A + +YLK GL F RN +
Sbjct: 115 IGRLLY-LNSTRPDITFITQQLSQFLSKPTQTHHNAALRVLKYLKCCPGKGLFFPRN--S 171
Query: 1166 PNIVIGYVDSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGV 1225
+ G+ D D+AG +D RRS+SG F + NS ISW+ Q+ V+ S++EAEY A+
Sbjct: 172 SLHLQGFSDVDWAGCVDSRRSISGQCFFIGNSLISWRTKKQTTVSRSSSEAEYRALASAT 231
Query: 1226 KEAIWLRGLVSDLGL-TQDVVTVFCDSQS 1253
E W+ L+ DL + + + +FCD+Q+
Sbjct: 232 CELQWILYLLKDLNIQSSKLPVLFCDNQN 260
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 142 bits (359), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 162/369 (43%), Gaps = 49/369 (13%)
Query: 343 LTGVRHVPDLKRNLISLGTL-ESLGC--KYAAEGGVLKVSKGALILMKANRSGSLYVLQG 399
LT V + + NL+S+ + ESL C ++ +++ S ++ AN+ LY
Sbjct: 414 LTNVLYSSSFRLNLMSVHKVCESLSCTFQFLPNQCIIQDSTSLKMIGLANQQDGLY---- 469
Query: 400 STVISSVTVSLFMSDSDVTKLWHMRLGHMSEKGMTILSKR-GLLCGQNTGRLEFCEHCIL 458
+LGH+S + M ++S + N + C+ C
Sbjct: 470 ------------------------KLGHLSHQRMNMMSSLYSNIVSDNKNSV--CDICHF 503
Query: 459 GKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHK 518
KQK L F I + +H D+WGP + GH Y LTI+DD S +W LK K
Sbjct: 504 AKQKHLPFSISTSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFLWIISLKTK 563
Query: 519 DEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQN 578
V K + +++ Q K +R+DNG EF +F E+ GI+ ++ TPQQN
Sbjct: 564 SGVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFL---ILSFYESLGILHQKSCVETPQQN 620
Query: 579 GVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNP 638
G ER + ++ R +L LP +W+ A A +L+NR P L+ + P
Sbjct: 621 GRVERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSPYYALHHKF 680
Query: 639 VDYSNLKIFGCPAYAHINQGKLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFN 698
D K NQ RARK +F+GY SG KG+ L +++ +SR V F+
Sbjct: 681 PDIDTFK----------NQAST--RARKTVFLGYKSGYKGFILLDIHSREIFVSRHVVFH 728
Query: 699 ENVLILPGK 707
E L P
Sbjct: 729 EYFLPYPSN 737
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 202/500 (40%), Gaps = 141/500 (28%)
Query: 786 AYALAVAEDTVEGGEPHTYSEAISCPNSSEWQVAMQEEIESLHKNDTWKLVKLPKGQRVV 845
++ LA++ D EP ++ +A S P WQ+AM E+ +L T
Sbjct: 142 SFTLAISSDI----EPSSFKQAQSDP---RWQLAMSPELSALEATGT------------- 181
Query: 846 GCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHGVDFNEVFSPVVRHTSIRVXXXXXXXX 905
W++ N +++ RL
Sbjct: 182 ---WIFVDPPPNISPIGSKWIFRL------------------------------------ 202
Query: 906 XXXXXXXDVKTAFLHGELEEQIYMQQPEGFVVPGKEDYVCHLKKSLYGLKQSPRQWYKRF 965
D FLHG+L+E +YM P+G V P + VC L KSLYGLKQ+ R+W+++
Sbjct: 203 ------NDANNTFLHGDLQEDVYMHPPQG-VSPPRPGQVCKLLKSLYGLKQASRRWFEKL 255
Query: 966 DSFMVEHGYCRSQYDNCVYHKKFSNGSFVYLLLYVDDMLIAARDKSLIKELKDQLSSEFE 1025
S ++ G+ ++ D+ + + S SF LL+YV
Sbjct: 256 ISLLLTIGFVQASADHS-FLIRASPTSFTALLIYV------------------------- 289
Query: 1026 MKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKVLERFNMSNSKPVSTPLAAHFKLSSD 1085
S+ + L QR Y +L ++ K VSTPL L D
Sbjct: 290 -----------------AHSSKGISLCQRKYCLDLLSDAGLTTCKSVSTPLDYACLLHID 332
Query: 1086 FCPQSNEEKEQLSHVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWI 1145
P ++ + Y +G L+Y + TRPD++ A +S++M+ P H + +
Sbjct: 333 DGPPFDDV------LAYRCLIGCLLY-LTTTRPDISFATQQLSQFMAKPSVNHHRTALCV 385
Query: 1146 FRYLKGSVDTGLVFDRNKVNPNIVIGYVDSDYAGDLDKRRSLSGYVFTLYNSAISWKASL 1205
RYL+ GL F R + ++G+ D+D+ G +D RRSL +++ ++
Sbjct: 386 LRYLQVCPGRGLFFPRT--SEMQLLGFSDADWGGCVDSRRSL------------AFQEAI 431
Query: 1206 QSIVALSTTEAEYIAITEGVKEAIWLRGLVSDLGLTQDVVTVFCDSQSAIHLTKNQMYHE 1265
+ + +I+ +R + ++CD+QSA+H+ N +++E
Sbjct: 432 HRFLFFLRSGISCFSISHPRTPMAHIR-----------LSILYCDNQSALHIAANPVFYE 480
Query: 1266 RTKHIDVRQYFIRDVVANGK 1285
RTKH+D+ + +R+ V G
Sbjct: 481 RTKHLDIDCHIVREKVQRGS 500
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)
Query: 418 TKLWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTL 477
T LWH RLGH+S + ++ + L + C+ C KQ++L +
Sbjct: 442 TALWHFRLGHLSNQRLSQM--HHLYPDIHVDNKFICDICHFAKQRKLPYNSSTSIASSNF 499
Query: 478 DYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTG 537
+ ++ D+WGP G Y LTI+DD S +W K+K EV S + + L++N+
Sbjct: 500 ELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQNKHK 559
Query: 538 KKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLS 597
K +R+DNG F +AF ++GI+ R+ TPQ N
Sbjct: 560 VTPKIIRSDNGHVFL---LSAFYASQGIIHQRSCVETPQHN------------------- 597
Query: 598 NVALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQ 657
+L+NR P L+ K P +V D ++ K+FGC YA Q
Sbjct: 598 ----------------VFLINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYASTLQ 641
Query: 658 G---KLEPRARKCIFIGYASGVKGYRLWCPELKKVIISRDVTFNENVL 702
KL+ RARK +F+GY SG KG L+ K++ +SR+VTF+E++L
Sbjct: 642 SHRTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMSRNVTFHESIL 689
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 26/253 (10%)
Query: 420 LWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDY 479
+WH RLGH+S + ++++ H + I +K L
Sbjct: 540 IWHFRLGHLSNQRLSMM------------------HSLYSSITIDNKAYSIASSKFEL-- 579
Query: 480 IHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKK 539
+H D+WGP V GH Y LTI+DDFS +W LK+K EV + K + +L+
Sbjct: 580 LHFDIWGPLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQIT 639
Query: 540 VKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNV 599
K +R+DNG EF +F A ++GI+ ++ TPQQNG ER + ++ R +L
Sbjct: 640 PKYIRSDNGPEFLIPEFYA---SKGIIHQKSCVETPQQNGRVERKHQHILNVARALLFQS 696
Query: 600 ALPKEFWAEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHI---N 656
LP FW+ A A +L+N+ P K P ++ + D ++ K+FGC +A
Sbjct: 697 KLPNFFWSYAVIHAVFLINKVPTPLFKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQ 756
Query: 657 QGKLEPRARKCIF 669
+ KL+ RARK IF
Sbjct: 757 RSKLQSRARKSIF 769
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 69/93 (74%)
Query: 571 VAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSPHTSLDFKIP 630
V TPQ NGVAERMN TL+E+ R MLSNV L + FWAEA +T CYLVNR PHTS++ K
Sbjct: 2 VRNTPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTL 61
Query: 631 EEVWTGNPVDYSNLKIFGCPAYAHINQGKLEPR 663
E+W G VDYSNL++FGC Y H+N+ KLE R
Sbjct: 62 YELWPGKSVDYSNLRVFGCTVYYHVNEWKLERR 94
>IMGA|Medtr8g128700.1 Integrase, catalytic region
chr08_pseudomolecule_IMGAG_V3 30179122-30179823 H
EGN_Mt090430 20090702
Length = 193
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 377 KVSKGALILMKANRSGSLYVLQGSTVISSVTVSLFMSDS-DVTKLWHMRLGHMSEKGMTI 435
++ G +++ + + G+LY LQG+T+ V+ F D D+TKLWHMRLGHMSE+GM I
Sbjct: 59 QLDGGNIVMAASVKRGTLYFLQGTTLTDYGVVASFEIDQEDMTKLWHMRLGHMSERGMQI 118
Query: 436 LSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGG 495
L+K LL G EH GK+ R F IHRTK TLDYIH D W PSRV GG
Sbjct: 119 LAKDNLLYGHKIKDPGLSEHYAFGKRHRNKFLKVIHRTKGTLDYIHDDCWEPSRVESLGG 178
Query: 496 HHYTLTIIDDFS 507
H Y L++IDD+S
Sbjct: 179 HKYFLSLIDDYS 190
>IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
27872933-27871392 E EGN_Mt090430 20090702
Length = 256
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 121/237 (51%), Gaps = 33/237 (13%)
Query: 996 LLLYVDDMLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRN 1055
+++YV DM++ + L+++L L+S F +KDLGA K LG+E+ + +S G L ++Q
Sbjct: 1 MIVYVGDMIVTGNNTPLLQQLVSHLNSAFSLKDLGALKYFLGIEV-KPQSNGSLLITQSK 59
Query: 1056 YIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAMVC 1115
Y+ +L + +M +K + +P+ + KLS D P+S
Sbjct: 60 YVRDLLAKTDMQEAKSLPSPMISDLKLSKD------------GSTPFSD----------- 96
Query: 1116 TRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVIGYVDS 1175
P L +++ +Y + G + + R+LKG++ GL+ P ++ Y D+
Sbjct: 97 --PTLCRSIVRALQYANLIG-----PLSNVLRHLKGTLSWGLLVRPIPTYPLSILAYCDA 149
Query: 1176 DYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLR 1232
D+ D D RS+ VF L + ISW A Q+++A S+TEAEY ++ E +W++
Sbjct: 150 DWGSDPDD-RSVDACVF-LGPNLISWWAKKQAVIARSSTEAEYSSLALAKSELLWIK 204
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Query: 453 CEHCILGKQKRLTFGIGIH-RTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDDFSCKVW 511
C C++GK R F + R K L+ +HSD++GP +VP G+ Y +T +D++S +W
Sbjct: 15 CNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSKMLW 74
Query: 512 AYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTV 571
Y +K K + FKK+K+L E Q+G K+K L T G E+ DF ++C N+GI+ T
Sbjct: 75 LYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIHEVTT 134
Query: 572 AGTP 575
TP
Sbjct: 135 PYTP 138
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 89/189 (47%), Gaps = 7/189 (3%)
Query: 442 LCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLT 501
L Q G +F C K F + + + I + +WGP V GH Y LT
Sbjct: 483 LAKQQDGLYKFYPSC---KSSNFEFS-ALSPSSCNVVSISNYIWGPLSVASVHGHRYFLT 538
Query: 502 IIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCE 561
I+DD + +W LK K EV S K + +++N K +RTDNG EF F A
Sbjct: 539 ILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFIRTDNGPEFMLPSFYA--- 595
Query: 562 NEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALPKEFWAEAASTACYLVNRSP 621
+ GI+ ++ TPQQNG ER + ++ R +L LP FW+ A A +L+NR P
Sbjct: 596 SHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAIHHAVFLINRVP 655
Query: 622 HTSLDFKIP 630
L + P
Sbjct: 656 TPLLHNQSP 664
>IMGA|Medtr6g069750.1 Reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12976555-12977103 H
EGN_Mt090430 20090702
Length = 149
Score = 87.0 bits (214), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 29/143 (20%)
Query: 820 MQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHG 879
MQ EI +L TWKLV LP + +GC+W+YK K G RYKARLV KGY Q G
Sbjct: 1 MQAEITALENTGTWKLVDLPPNVKPIGCRWIYKIKHYADG-SIQRYKARLVVKGYNQVEG 59
Query: 880 VDFNEVFSP----------------------------VVRHTSIRVXXXXXXXXXXXXXX 911
D+ + +SP V + T++R
Sbjct: 60 WDYFDTYSPVAKLTTARLVVKGYNQVEGWDYFDTYSLVAKMTTVRTVIALASINQWHIHK 119
Query: 912 XDVKTAFLHGELEEQIYMQQPEG 934
D +AFLHG+L+E +YM P+G
Sbjct: 120 LDANSAFLHGDLQEDVYMLIPQG 142
>IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33354025-33354392 H EGN_Mt090430 20090702
Length = 108
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 947 LKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKFSNGS-FVYLLLYVDDMLI 1005
L+KSLYGLKQ+ R WY + ++E+G+ S D+ ++ +S S F+ +L+YVDD++I
Sbjct: 5 LRKSLYGLKQASRNWYSKLSQALIEYGFQESHADHSLF--TYSRESIFMAVLIYVDDLVI 62
Query: 1006 AARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILR 1042
A D I K L F MKDLG K LG+E+ R
Sbjct: 63 AGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELAR 99
>IMGA|Medtr8g012170.1 polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 1857213-1857446 H
EGN_Mt090430 20090702
Length = 77
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 929 MQQPEGFVVPGKEDYVCHLKKSLYGLKQSPRQWYKRFDSFMVEHGYCRSQYDNCVYHKKF 988
M QP GFV P + VC L+KSLYGLKQ+P+ W++ F++ + + ++ D ++
Sbjct: 1 MSQPYGFVHPQHPNQVCKLRKSLYGLKQAPQAWFQALQKFLLGYNFQNAKSDTSLFIYVK 60
Query: 989 SNGSFVYLLLYVDDM 1003
+N +F Y L+YVDD+
Sbjct: 61 AN-TFAYFLVYVDDI 74
>IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
36507044-36505941 H EGN_Mt090430 20090702
Length = 367
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 1207 SIVALSTTEAEYIAITEGVKEAIWLRGLVSDLGLT-QDVVTVFCDSQSAIHLTKNQMYHE 1265
+ V+ S++EAEY A+ V E WL L+ D L ++CDSQSA H+ N +HE
Sbjct: 247 TTVSKSSSEAEYRAMATTVCEIQWLTYLLQDFNLQFHTPALLYCDSQSARHIAANTSFHE 306
Query: 1266 RTKHIDVRQYFIRDVVANGKIIVNKIATTHNPADMLMKPDPNLKFKH 1312
RTKHI++ + +R+ + + ++++ AD+L KP L F +
Sbjct: 307 RTKHIELDCHIVREKLQQKLFHLLPVSSSQQLADVLTKPLDPLPFSN 353
>IMGA|Medtr8g044880.1 polyprotein-like, putative
chr08_pseudomolecule_IMGAG_V3 10147539-10149356 H
EGN_Mt090430 20090702
Length = 196
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 23/167 (13%)
Query: 1145 IFRYLKGSVDTGLVFDRNKVNPNIVIGYVDSDYA-GDLDKRRSLSGYVFTLYNSAISWKA 1203
+ YLKG GL F R + + GY ++D+A G D RRS+S F W
Sbjct: 3 VLSYLKGCPGKGLFFPRQ--SSLQIQGYTNADWAVGCKDTRRSISEQCF------FCW-- 52
Query: 1204 SLQSIVALSTTEAEYIAITEGVKEAIWLRGLVSDLGLT-QDVVTVFCDSQSAIHLTKNQM 1262
S++EAEY A+ E L L+ DL + ++CD+QSAI++ N +
Sbjct: 53 --------SSSEAEYRALASATCELQRLTYLLRDLKVNCIKPPVLYCDNQSAIYIAANPV 104
Query: 1263 YHERTKHIDVRQYFIRDVVANGKIIVNKIATTHNPADMLMK---PDP 1306
+HE TKH+++ + +R+ + G + I++ AD K P P
Sbjct: 105 FHECTKHLEIDCHIVREKLQAGLFKLLPISSKDQVADFFTKSLLPQP 151
>IMGA|Medtr3g044280.1 hypothetical retrotransposon, related
chr03_pseudomolecule_IMGAG_V3 12337068-12337358 H
EGN_Mt090430 20090702
Length = 96
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 415 SDVTKLWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTK 474
++ +LWH RL HM EK M L K +L + L+ C+HCI+ K+ +++F +
Sbjct: 5 TEKVELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHSPKRP 64
Query: 475 VTLDYIHSDLWGPSRVPLKGGHHYTLTIIDD 505
LD +H L+GP + GG Y L+ IDD
Sbjct: 65 TILDLVHCHLFGPMKTGTIGGSTYFLSFIDD 95
>IMGA|Medtr5g082230.1 hypothetical retrotransposon, related
chr05_pseudomolecule_IMGAG_V3 30910887-30910597 H
EGN_Mt090430 20090702
Length = 96
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 415 SDVTKLWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQKRLTFGIGIHRTK 474
++ +LWH RL HM EK M L K +L + L+ C+HCI+ K+ +++F +
Sbjct: 5 TEKVELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHSPKRP 64
Query: 475 VTLDYIHSDLWGPSRVPLKGGHHYTLTIIDD 505
LD +H L+GP + GG Y L+ IDD
Sbjct: 65 TILDLVHCHLFGPMKTGTIGGSTYFLSFIDD 95
>IMGA|Medtr3g097190.1 copia-type polyprotein, putative
chr03_pseudomolecule_IMGAG_V3 23165389-23165052 H
EGN_Mt090430 20090702
Length = 85
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/77 (46%), Positives = 46/77 (59%)
Query: 1162 NKVNPNIVIGYVDSDYAGDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAI 1221
NK + + GY DSD GD RRS SG +F ++AISW Q I ALS+ EAEYIA
Sbjct: 6 NKKGESKLEGYSDSDRCGDRMDRRSTSGCLFKFNDAAISWCTKRQPITALSSCEAEYIAG 65
Query: 1222 TEGVKEAIWLRGLVSDL 1238
T +AIWL ++ +L
Sbjct: 66 TFAACQAIWLDNVIKEL 82
>IMGA|Medtr4g104320.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 22711151-22711574 H
EGN_Mt090430 20090702
Length = 99
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 42/140 (30%)
Query: 820 MQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHG 879
M EE+ S+ KN T +LV L ++ +G KWVYK K + G ++V K
Sbjct: 1 MLEELSSIKKNKTLELVGLSTDEKAIGVKWVYKLKTNHEG--------KIVKK------- 45
Query: 880 VDFNEVFSPVVRHTSIRVXXXXXXXXXXXXXXXDVKTAFLHGELEEQIYMQQPEGFVVPG 939
P+ D+K FL+G LEE ++++QP G +
Sbjct: 46 -------VPLFHF--------------------DMKLYFLNGSLEETMFVKQPSGLEIKC 78
Query: 940 KEDYVCHLKKSLYGLKQSPR 959
KE+ V L K LYGLKQ+PR
Sbjct: 79 KEENVYKLHKDLYGLKQAPR 98
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 494 GGHHYTLTIIDDFSCKVWAYFLKHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCG 553
GG Y + IDD+S W Y +K++ E+ + + +++ Q K +K R DN +E+
Sbjct: 2 GGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRD 61
Query: 554 GDFNAFCENEGIMRHRTVAGTPQQNGVAERMNMTLMERVRCMLSNVALP 602
+F +G + T QQ G AER + +++ V ML + + P
Sbjct: 62 SKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISASCP 110
>IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
24473881-24473486 H EGN_Mt090430 20090702
Length = 131
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 1038 MEILRDRSAGKLYLSQRNYIEKVLERFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQL 1097
MEIL + L L Q +Y ++L++FNM + T A + + EE E +
Sbjct: 1 MEILINSKG--LILHQTDYASEILKKFNMLDCNSTITHADA------NIIYEVKEEDEGV 52
Query: 1098 SHVPYSSAVGSLMYAMVCTRPDLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGL 1157
+ +GSL Y + +RP ++ V +VSR+MSNP K ++ + K I RY+ ++ G+
Sbjct: 53 DPTMFRRLIGSLRY-LCQSRPGISYLVGIVSRFMSNPLKTNFLSAKKILRYINSTLQYGI 111
Query: 1158 VFDRNKVNPNIVI-GYVDSD 1176
+F + + + GY D+D
Sbjct: 112 LFLVVQATEQLDMEGYSDAD 131
>IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG_V3
9341518-9340611 H EGN_Mt090430 20090702
Length = 155
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 1179 GDLDKRRSLSGYVFTLYNSAISWKASLQSIVALSTTEAEYIAITEGVKEAIWLRGLVSDL 1238
GD D ++S + Y+F + + ISW + Q IVALS++EA+Y+A + +A+W+ L+ +L
Sbjct: 66 GDQDDKKSTTCYLFMIGAAPISWSSKKQGIVALSSSEAKYVATSYAACQALWIEMLLEEL 125
Query: 1239 GLTQ-DVVTVFCDSQSAIHLTKNQMYH 1264
+ D + + D++ AI L + H
Sbjct: 126 NAFEVDRIKLLVDNKLAIDLADRPISH 152
>IMGA|Medtr3g044010.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 12181817-12181315 H
EGN_Mt090430 20090702
Length = 133
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 32/124 (25%)
Query: 343 LTGVRHVPDLKRNLISLGTLESLGCKYAAEGGVLKVSKGALILMKANRSGSLYVLQGSTV 402
L VR VP + +N ISL L+ G + +E V
Sbjct: 27 LNEVRPVPHMTKNQISLSLLDKKGFSFKSE----------------------------VV 58
Query: 403 ISSVTVSLFMSDSDVTKLWHMRLGHMSEKGMTILSKRGLLCGQNTGRLEFCEHCILGKQK 462
++S + D+T+LWHMRLGHMSE GM IL+K LLC QN L LG
Sbjct: 59 VASSEID----HKDMTRLWHMRLGHMSESGMQILAKDNLLCEQNLRILGSVNTVFLGNYI 114
Query: 463 RLTF 466
++F
Sbjct: 115 AISF 118
>IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 2876704-2878630 E
EGN_Mt090430 20090702
Length = 64
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 913 DVKTAFLHGELEEQIYMQQPEGFVVPGKEDYVCHLKKSLYGLKQSPRQWY-KRFDSFMV 970
DV AFLHG+L+E +YM+ P GF VC L+KS Y LK +P+ W+ KR + ++
Sbjct: 2 DVHNAFLHGDLQEDVYMKLPRGFHTSSSR-LVCKLRKSQYVLKHAPQCWFAKRLVALLI 59
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 516 KHKDEVFSTFKKWKILMENQTGKKVKRLRTDNGLEFCGGDFNAFCENEGIMRHRTVAGTP 575
K K EV + + + + +ENQ KVK +RTDNG EF DF + ++GI + TP
Sbjct: 4 KTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMPDFYS---SKGIEHQTSCVETP 60
Query: 576 QQNGVAERMNMTLMERVRCML 596
QQNG ER + ++ R ML
Sbjct: 61 QQNGRVERKHQHILNVARAML 81
>IMGA|Medtr4g045170.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 10725937-10725201 H
EGN_Mt090430 20090702
Length = 197
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 1006 AARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKVLERFN 1065
AA + I E + + +FEM DLG LG+E R + L + QR Y K+L++F+
Sbjct: 16 AAVKLAHISEFRKDMMRQFEMTDLGHISYFLGIEF--HRRSRDLLMHQRRYAIKILKKFD 73
Query: 1066 MSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAMVCTRPDLAQAVS 1125
+ TP F+LS N ++ + Y +GS ++ V + D ++
Sbjct: 74 IEYRNHAVTPAKTIFQLS------KNNDESDVDPTQYGRLIGSQVFIAVTLKIDNISTIN 127
Query: 1126 VVSRYMSNPGKEHWQAVKWIFRYLKGSVDTG 1156
+ +++ +H ++ F YL+ V G
Sbjct: 128 LAKNPIAHGRSKH---IEMRFHYLREQVSKG 155
>IMGA|Medtr1g102700.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 21129202-21129726 H
EGN_Mt090430 20090702
Length = 135
Score = 53.5 bits (127), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 1066 MSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAMVCTRPDLAQAVS 1125
M N P T + L ++ + KE + + +G L Y + TRPDLA ++
Sbjct: 1 MGNCNPTLTQVVTSLSLINE------QRKENVDFTQFRMLIGCLRY-LCNTRPDLALSIG 53
Query: 1126 VVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRN 1162
++S++M N G H AVK + Y+KG V+ ++F N
Sbjct: 54 LLSQFMQNLGVSHMIAVKRMLIYIKGKVEHAILFSNN 90
>IMGA|Medtr3g097800.1 GRAS transcription factor
chr03_pseudomolecule_IMGAG_V3 23523718-23520307 E
EGN_Mt090430 20090702
Length = 545
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 455 HCILGKQKRLTFGIGIHRTKVTLDYIHSDLWGPSRVPLKGGHHYTLTIIDDFS 507
+CILGK KRL F I HR+ +L+Y H DLWG +++P Y +I D S
Sbjct: 493 YCILGKAKRLKFNIVAHRSIRSLEYAHGDLWGANKIPTHNVAQYFPPLIHDLS 545
>IMGA|Medtr5g099250.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
39665230-39664877 H EGN_Mt090430 20090702
Length = 117
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 1003 MLIAARDKSLIKELKDQLSSEFEMKDLGAAKKILGMEILRDRSAGKLYLSQRNYIEKVLE 1062
M+I+ D I+ELK L FEMKDL LG+E L S L+LSQ Y ++
Sbjct: 1 MIISGDDSIGIEELKQFLCHHFEMKDLEPLSYFLGLEAL--SSNDDLFLSQAKYASDLVS 58
Query: 1063 RFNMSNSKPVSTPLAAHFKLSSDFCPQSNEEKEQLSHVPYSSAVGSLMYAMVCTRPDLAQ 1122
+ +++ K T L + + F PQ + + Y VGSL+Y + TRP+++
Sbjct: 59 QAGLTDCKIEYTRLEPNIQ----FTPQDGTLLDDATL--YWHFVGSLIY-LTNTRPNISY 111
Query: 1123 AVSVVS 1128
V +VS
Sbjct: 112 FVHLVS 117
>IMGA|Medtr3g089910.1 copia LTR rider, putative
chr03_pseudomolecule_IMGAG_V3 21313887-21314173 H
EGN_Mt090430 20090702
Length = 76
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 24/89 (26%)
Query: 342 NLTGVRHVPDLKRNLISLGTLESLGCKYAAEGGVLKVSKGALILMKANRSGSLYVLQGST 401
L VRHVP + +N ISL L+ + EGGV +Y +GS+
Sbjct: 12 TLKEVRHVPHMTKNQISLSLLDKKRFSFKGEGGV------------------IYACKGSS 53
Query: 402 VISSVTVSLFMSDSDVTKLWHMRLGHMSE 430
VI V ++ KLWHMRLGHMSE
Sbjct: 54 VILKVV------KREMKKLWHMRLGHMSE 76
>IMGA|Medtr4g104330.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 22711685-22712637 H
EGN_Mt090430 20090702
Length = 196
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1119 DLAQAVSVVSRYMSNPGKEHWQAVKWIFRYLKGSVDTGLVFDRNKVNPNIVI-GYVDSDY 1177
D+ A+ + SR+MS P K H+ K I RY+KG + G++F +++ + + G++D D+
Sbjct: 56 DICFAIGLASRFMSKPMKTHFLVAKCILRYIKGKIQYGILFPISQMTEKLELEGFLDDDW 115
Query: 1178 AGD 1180
GD
Sbjct: 116 YGD 118
>IMGA|Medtr1g076760.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 15437706-15436255 H
EGN_Mt090430 20090702
Length = 186
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 607 AEAASTACYLVNRSPHTSLDFKIPEEVWTGNPVDYSNLKIFGCPAYAHINQGKLEPRARK 666
EA ST +++N SP SL +++ +++W + Y +L +FGC Y +++
Sbjct: 110 GEALSTIVHVLNLSPSVSLQYEVRDKIWLRKNISYDHLCVFGCKTYV---------KSQH 160
Query: 667 CIFIGYASGVKGYRLWCPELKKVI 690
C+F+ Y YR + ++KK+I
Sbjct: 161 CMFLCYDLDGADYRFYDCDMKKLI 184
>IMGA|Medtr5g086740.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33353678-33353912 H EGN_Mt090430 20090702
Length = 57
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 843 RVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHGVDF 882
++VGC+WVYK K G E +YKARLVAKGYTQ G DF
Sbjct: 12 KIVGCRWVYKIKYKASG-EIEKYKARLVAKGYTQVEGEDF 50
>IMGA|Medtr8g101650.1 Putative retroelement pol polyprotein,
chr08_pseudomolecule_IMGAG_V3 22106944-22106630 H
EGN_Mt090430 20090702
Length = 104
Score = 49.7 bits (117), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 820 MQEEIESLHKNDTWKLVKLPKGQRVVGCKWVYKKKEGNPGVEDARYKARLVAKGYTQKHG 879
M ++ ++ + W L L K + V+GCKW Y+ K G + R+K L+ K YT++ G
Sbjct: 1 MTNKLRAITTKNAWSLTALSKDKVVIGCKWEYRIKHKVNGTIE-RFKTFLMVKDYTRQEG 59
Query: 880 VDFNEVFSPVVRHTSI 895
V+ + FS V + T +
Sbjct: 60 VNSLDTFSLVAKITIV 75