Jatropha Genome Database
- JcCA0000182.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0000182.20 + phase: 2 /TE
(660 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr6g077060.1 RNA-directed DNA polymerase (Reverse transc... 492 e-139
IMGA|Medtr6g077310.1 Polynucleotidyl transferase, Ribonuclease H... 384 e-106
IMGA|Medtr3g059210.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 243 2e-64
IMGA|Medtr5g105390.1 Polynucleotidyl transferase, Ribonuclease H... 148 7e-36
IMGA|Medtr3g061730.1 Polynucleotidyl transferase, Ribonuclease H... 142 5e-34
IMGA|AC135504_5.1 pol-polyprotein, putative AC135504.61 87442-87... 125 7e-29
IMGA|Medtr3g169280.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 124 2e-28
IMGA|Medtr4g041210.1 RNA-directed DNA polymerase (Reverse transc... 89 9e-18
IMGA|Medtr6g077300.1 Ribonuclease H chr06_pseudomolecule_IMGAG_V... 82 7e-16
IMGA|Medtr4g047400.1 Ribonuclease H chr04_pseudomolecule_IMGAG_V... 80 4e-15
IMGA|Medtr4g047190.1 Ribonuclease H chr04_pseudomolecule_IMGAG_V... 80 4e-15
IMGA|Medtr3g068370.1 Polynucleotidyl transferase, Ribonuclease H... 67 3e-11
IMGA|Medtr6g028320.1 Polynucleotidyl transferase, Ribonuclease H... 66 4e-11
IMGA|Medtr3g061900.1 Polynucleotidyl transferase, Ribonuclease H... 64 2e-10
IMGA|Medtr6g059710.1 GAG-POL precursor, putative chr06_pseudomol... 62 9e-10
IMGA|Medtr3g026360.1 Polynucleotidyl transferase, Ribonuclease H... 59 7e-09
IMGA|Medtr2g120570.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V... 59 8e-09
IMGA|Medtr3g162430.1 RNA-directed DNA polymerase (Reverse transc... 59 8e-09
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 59 1e-08
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 58 1e-08
IMGA|Medtr3g061740.1 RNA-directed DNA polymerase (Reverse transc... 53 4e-07
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 51 2e-06
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 51 2e-06
IMGA|Medtr4g073750.1 Polynucleotidyl transferase, Ribonuclease H... 51 2e-06
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 50 3e-06
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 50 3e-06
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 50 4e-06
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 49 6e-06
IMGA|AC233082_1.1 Polynucleotidyl transferase, Ribonuclease H fo... 49 9e-06
>IMGA|Medtr6g077060.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr06_pseudomolecule_IMGAG_V3 15141903-15146629 E
EGN_Mt090430 20090702
Length = 1200
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/568 (43%), Positives = 349/568 (61%), Gaps = 21/568 (3%)
Query: 80 NRAWKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLA 139
N W L FDG+ N G G VI +P G R+LF TNNMAEYEACI G+E +
Sbjct: 559 NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAID 618
Query: 140 SGAKEVEVIGDSLLVIEHANERWKVEEERLKPYVEYLLKKAALFDKITFTHIGRIHNRIP 199
K +++ GDS LVI W+ +L PY +Y + F K+ HI R N++
Sbjct: 619 MRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMA 678
Query: 200 NALANLASA-----WQDLSKV-------PKKPFIITAANIPCYKEHFVNQVESEEEPWFT 247
+ALA L+S W D+ + P F I I E+ V+ +PW+
Sbjct: 679 DALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDV-IDQAGENVVDY-----KPWYY 732
Query: 248 DILWYMKDGTFSDDATKEDRSVLRKMALNYVLADGELYRRAWDGMLLRCVSKKEGEEIMK 307
DI ++ + A+K+D+ LR++A ++L LY+R +D +LLRCV + E E++M
Sbjct: 733 DIKQFLLSREYPSGASKQDKKTLRRLASRFLLNGDILYKRNYDMVLLRCVDEHEAEQLMH 792
Query: 308 KIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRP 367
+H+G GTH +G +++RK++R GY+WM ME DC Y R C CQ + +K H+P L
Sbjct: 793 DVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNV 852
Query: 368 TAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSRWIEAQSYKTLTAKHMARFIEQN 427
+ WPFS WGID+IG+I P ASNGH++ILVA+DYF++W+EA SY +T + +A+FI+ N
Sbjct: 853 ISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYANVTKQVVAKFIKNN 912
Query: 428 IFCRYGVPHHIVTDNGSHFQADVGQ-LLYRYKVEHHHSSPYRPQANGVVEAANKEIKRIL 486
I CRYGVP I+TDNG++ +V Q L +K+EHH+SSPYRPQ NG VEAANK IKRI+
Sbjct: 913 IICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIV 972
Query: 487 SKMCEKYRSWAEKLPFALWGHRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVFVEAG 546
KM Y+ W E LP+AL G+RTT + GA+PF LVYGMEAVLP+E+E SLRV +EA
Sbjct: 973 QKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAK 1032
Query: 547 LTEEEWVKKRYEDLALLDGRRLNARFQDQMRKRRIARFYNKRVHPRALKNGH*VLIKLLD 606
L+E EW + RY+ L L++ +R++A + Q + R+ ++K+VHPR K G VL + +
Sbjct: 1033 LSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVS 1092
Query: 607 HEAQNNPGGKFKPNWHGPFRIQKLLVKG 634
Q +P K+ PN+ GP+ ++K G
Sbjct: 1093 Q--QPDPRDKWTPNYEGPYVVKKAFSGG 1118
>IMGA|Medtr6g077310.1 Polynucleotidyl transferase, Ribonuclease H
fold chr06_pseudomolecule_IMGAG_V3 15275871-15277296 E
EGN_Mt090430 20090702
Length = 445
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/401 (45%), Positives = 262/401 (65%), Gaps = 20/401 (4%)
Query: 244 PWFTDILWYMKDGTFSDDATKEDRSVLRKMALNYVLADGELYRRAWDGMLLRCVSKKEGE 303
PW+ DI ++ + A+K+D+ LR++A ++L LY+R +D +LLRCV + E E
Sbjct: 43 PWYYDIKQFLLSREYPPGASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAE 102
Query: 304 EIMKKIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAV 363
++M +H+G GTH +G +++RK++R GY+WM ME DC Y R C CQ + +K H+P
Sbjct: 103 QLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMTMEHDCYQYARKCHKCQIYADKIHVPPH 162
Query: 364 ELRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSRWIEAQSYKTLTAKHMARF 423
L + WPFS WGID+IG+I P ASNGH++ILVA+DYF++W F
Sbjct: 163 ALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKW----------------F 206
Query: 424 IEQNIFCRYGVPHHIVTDNGSHFQADVGQ-LLYRYKVEHHHSSPYRPQANGVVEAANKEI 482
I+ NI CRYGVP I+TDNG++ +V Q L +K+EHH+SSPYRPQ NG VEAANK I
Sbjct: 207 IKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI 266
Query: 483 KRILSKMCEKYRSWAEKLPFALWGHRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVF 542
KRI+ KM Y+ W E LP+AL G+RTT + GA+PF LVYGMEAVLP+E+E SLRV
Sbjct: 267 KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVI 326
Query: 543 VEAGLTEEEWVKKRYEDLALLDGRRLNARFQDQMRKRRIARFYNKRVHPRALKNGH*VLI 602
+EA L+E EW + RY+ L L++ +R++A + Q + R+ ++K+VHPR K G VL
Sbjct: 327 MEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLK 386
Query: 603 KLLDHEAQNNPGGKFKPNWHGPFRIQKLLVKGAAELITMEG 643
+ + Q +P GK+ PN+ GP+ ++K G A ++T G
Sbjct: 387 RRVSQ--QPDPRGKWTPNYEGPYVVKKAF-SGGALILTHRG 424
>IMGA|Medtr3g059210.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
13291307-13288982 H EGN_Mt090430 20090702
Length = 695
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/579 (27%), Positives = 274/579 (47%), Gaps = 77/579 (13%)
Query: 83 WKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLASGA 142
W L DGS+N G+GA + +E P G + R F +NN AEYEA GM L
Sbjct: 191 WVLSVDGSSNLKGSGAGVTLEGPYGVLIEQSLRFDFKSSNNQAEYEALFAGMRLALKVVV 250
Query: 143 KEVEVIGDSLLVIEHANERWKVEEERLKPYVEYLLKKAALFDKITFTHIGRIHNRIPNAL 202
KE+E DS LV ++ ++ +L Y+E +++ N + L
Sbjct: 251 KELEAKSDSQLVFRQVTGNFQTKDPQLLMYLESVIE----------------QNGRADLL 294
Query: 203 ANLASAWQDLSKVPKKPFIITAANIPCYKEHFVNQVESEEEPWFTDILWYMKDGTFSDDA 262
A LAS + + + I P ++ + + + W I+ Y+KD +
Sbjct: 295 AKLASTKRQGNN---RSVIQETLKQPSIEQKEFLFLTEDFKSWMGHIIRYLKDDQLPME- 350
Query: 263 TKEDRSVLRKMALNYVLADGELYRRAWDGMLLRCVSKKEGEEIMKKIHEGVCGTHLSGMS 322
+E S ++K A+ +V+ +L+ R + L+C++ ++ E ++ ++ EGVCGTH+ G +
Sbjct: 351 -EEQASKVKKRAIKFVVIAYQLFIRGFSSPHLKCLAPQQAEYVIAEVDEGVCGTHIGGRA 409
Query: 323 LARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDII 382
LA KV+R GY+W M+ DC YV+ C +K P WPF WG+DI+
Sbjct: 410 LAAKVLRAGYYWPTMKEDCSKYVKKC-------DKLISP----------WPFFKWGVDIL 452
Query: 383 GKITPAASNGHQYILVAVDYFSRWIEAQSYKTLTAKHMARFIEQNIFCRYGVPHHIVTDN 442
G P A ++++VAVDYF++WIE + T+TA + +F + I C +G+P +VTD
Sbjct: 453 GPF-PLAQGQLKFLIVAVDYFTKWIEVELVATITADRIKKFYWKKIICNFGLPAVLVTDK 511
Query: 443 GSHF-QADVGQLLYRYKVEHHHSSPYRPQANGVVEAANKEIKRILSKMCEKYRS-WAEKL 500
G+ + + + + ++ + + PQ+NG E+ANK I + L K E + W E+L
Sbjct: 512 GTQYASSSMANFCKEWGIKLNFTLVKHPQSNGQAESANKVILQGLKKRLEAAKGLWVEEL 571
Query: 501 PFALWGHRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVFVEAGLTEEEWVKKRYEDL 560
P +W + TT +PF +VYG +A++PI++ + S RV EE +L
Sbjct: 572 PMVMWSYHTTPHSSTQETPFRIVYGSDAMIPIQVMEPSARVLFA---QEEVNNSNLLNNL 628
Query: 561 ALLDGRRLNARFQDQMRKRRIARFYNKRVHPRALKNGH*VLIKLLDHEAQNNPGGKFKPN 620
+ R A+ +++ KRR + Y+ +
Sbjct: 629 DFQEEVRARAQVKEEACKRRAEQRYDTK-------------------------------- 656
Query: 621 WHGPFRIQKLLVKGAAELITMEGKPVNRIINQDQMKRFY 659
GP R++ + K A L ++GK V+R N ++ ++
Sbjct: 657 -EGPIRVKDEVGKRAYRLERLDGKKVSRTWNAANLRYYF 694
>IMGA|Medtr5g105390.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 42329455-42328322 E
EGN_Mt090430 20090702
Length = 244
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 131/256 (51%), Gaps = 22/256 (8%)
Query: 328 MRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDIIGKITP 387
MR GYFW M D +YV C CQ H + P EL WPF+ WGI
Sbjct: 1 MRAGYFWPTMLKDAQDYVNLCDKCQRHGDMHLAPPAELTSLISPWPFAWWGI-------- 52
Query: 388 AASNGHQYILVAVDYFSRWIEAQSYKTLTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQ 447
VA+DY ++WIEA+ +TAK++ RF ++NI R+GVP ++++NGS F
Sbjct: 53 ----------VAIDYSTKWIEAEPLAKITAKNVLRFFKRNILARFGVPALVISNNGSQFT 102
Query: 448 ADVGQ-LLYRYKVEHHHSSPYRPQANGVVEAANKEIKRILSKMCEKYRS-WAEKLPFALW 505
Q L ++ +S PQA+G+ EAAN+ I R + + + ++ AE+L LW
Sbjct: 103 DQKFQDYLRNIDIKQSFTSVEHPQAHGLAEAANRVILRGIRRRLDATKTKRAEELHTVLW 162
Query: 506 GHRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVFVEAGLTEEEWVKKRYEDLALLDG 565
+RTT SPF L YG +AV+PIEL + + R+ + V R E L +D
Sbjct: 163 SYRTTPHSTTSESPFRLTYGTKAVIPIELTELTWRIEADTDFPTNT-VNLR-EKLEFVDE 220
Query: 566 RRLNARFQDQMRKRRI 581
R +A ++ K++I
Sbjct: 221 VRNDAILRETALKQKI 236
>IMGA|Medtr3g061730.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 14035625-14034550 H
EGN_Mt090430 20090702
Length = 270
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 235 VNQVESEEEPWFTDILWYMKDGTFSDDATKEDRSVLRKMALNYVLADGELYRRAWDGMLL 294
VN + EE W +L Y+ G+F+ + E+ V+RK A +V +LY+R LL
Sbjct: 10 VNLIIEREESWMATLLKYL-TGSFTP-VSAEEEQVVRKRASKFVNVSRKLYKRGRTNPLL 67
Query: 295 RCVSKKEGEEIMKKIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYH 354
RC+ + E ++ ++HEGVCG+H+ G +LA K++R GY+W M D ++VR C CQ
Sbjct: 68 RCLGEDETHLVLLEVHEGVCGSHIRGRALAAKLLRSGYYWPTMLHDSSDFVRKCDKCQKF 127
Query: 355 DNKSHLPAVELRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSRWIEAQSYKT 414
K H A +L WPF W +DI+G P A ++++V VDYF++WIEA++
Sbjct: 128 SYKKHALAQKLTSVYSPWPFHIWAVDIVGPF-PLAPGQLEFLIVGVDYFTKWIEAEAVAK 186
Query: 415 LTAKHMA 421
+TA+ A
Sbjct: 187 ITAERSA 193
>IMGA|AC135504_5.1 pol-polyprotein, putative AC135504.61 87442-87913
H EGN_Mt090430 20090702
Length = 142
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
Query: 281 DGELYRRAWDGMLLRCVSKKEGEEIMKKIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGD 340
+G LY+R + L++C+ E +E++ +H+G+CG HL SLARKV+R GY+W M D
Sbjct: 2 EGTLYKRGFITPLIKCLGPNETQEVLADVHDGICGQHLDVKSLARKVLRAGYYWPTMLKD 61
Query: 341 CVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAV 400
+YV C CQ H + P VEL WPF+ WGID++G P A+ +Y++VA+
Sbjct: 62 AEDYVNLCDKCQRHGDMHLAPPVELTSLVSPWPFAWWGIDLLGPF-PKATGQLKYLVVAI 120
Query: 401 DYFSRWIEAQSYKTLTAKH 419
+Y ++WIE + + AK+
Sbjct: 121 NYSTKWIEVEPLAKIKAKN 139
>IMGA|Medtr3g169280.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
44103723-44102826 H EGN_Mt090430 20090702
Length = 258
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 78/320 (24%)
Query: 83 WKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLASGA 142
W ++ S+N G+GA I++E + +A + G+ G
Sbjct: 12 WTVFVYESSNSKGSGAGIIVE----------------------DNKAFLAGLRTAQDMGE 49
Query: 143 KEVEVIGDSLLVIEHANERWKVEEERLKPYVEYLLKKAALFDKITFTHIGRIHNRIPNAL 202
K+V++ DS LV + V+EE L+ YV+++L+K + + TH+ R N + L
Sbjct: 50 KKVKIFTDSQLVASQVTGEFHVKEEHLQKYVQFVLEKMKEIEAVEVTHVPREQNTRADIL 109
Query: 203 ANLASAWQDLSKVPKKPFIITAANIPCYKEHFVNQVESEEEPWFTDILWYMKDGTFSDDA 262
+ LAS TA + +N+ +E+ A
Sbjct: 110 SKLASTR-------------TANGNKTMIQEVLNETSIQEK------------------A 138
Query: 263 TKEDRSVLRKMALNYVLADGELYRRAWDGMLLRCVSKKEGEEIMKKIHEGVCGTHLSGMS 322
E +S+L LN E +E++ +H+G+CG HL +
Sbjct: 139 KDEMKSLLVHFRLN------------------------ETQEVLADVHDGICGQHLGAKA 174
Query: 323 LARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDII 382
LA++++R GY+W M D +Y+ C CQ H + P +L WPF+ WGIDI+
Sbjct: 175 LAKQILRAGYYWPTMLKDTQDYMNLCDKCQRHGDMHLAPPADLTLVVSPWPFAWWGIDIL 234
Query: 383 GKITPAASNGHQYILVAVDY 402
G P A+ +Y++VA+DY
Sbjct: 235 GPF-PKAAGELKYLIVAIDY 253
>IMGA|Medtr4g041210.1 RNA-directed DNA polymerase (Reverse
transcriptase); Peptidase aspartic, active site;
Retrotransposon gag protein; Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
9673679-9667953 H EGN_Mt090430 20090702
Length = 1435
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 12/313 (3%)
Query: 276 NYVLADGELYRRAWDGMLLRCVSKKEGEEIMKKIHEGVCGTHLSGMSLARKVMRQGYFWM 335
NY + +G L+ W L+ + I+++ H G H SG++ + + +FW
Sbjct: 1035 NYSIRNGLLH---WKDRLVIPEVPELIHSILQEFHSSPLGGH-SGITRTKARISAQFFWP 1090
Query: 336 QMEGDCVNYVRHCKACQYHDNKSHLPAVELRP-TAPSWPFSAWGIDIIGKITPAASNGHQ 394
+ D ++ C CQ + LPA L+P + PS + +D + + P S+G+
Sbjct: 1091 NLHKDVTLFISTCLVCQQAKVATTLPAGLLQPLSIPSQIWEDVAMDFVTGLPP--SHGYT 1148
Query: 395 YILVAVDYFSRWIEAQSYKT-LTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQADVGQL 453
+ V +D S++ K+ ++ +A+ ++ +G P IV+D F + Q
Sbjct: 1149 VLFVVIDRLSKYCHLTPLKSDYSSLSVAQAFLHSVVKLHGFPRSIVSDRDKVFLSKFWQH 1208
Query: 454 LYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSKM-CEKYRSWAEKLPFALWGHRTTF 511
L++ + SS Y PQ++G EA NK I+ L + +SW LP+A + + T+
Sbjct: 1209 LFKLSGTTLNMSSAYHPQSDGQSEALNKCIELYLRCFTADNPKSWFTLLPWAEFWYNTSH 1268
Query: 512 KLVNGASPFELVYGMEAVLPIELEKKSLRVFVEAGLTEEEWVKKRYEDLALLDGRRLNAR 571
G +PF VYG + ++ E +S L E + L + + +
Sbjct: 1269 HSSIGMTPFRAVYGRDPPQVVKYEIQSADPPALQDLLSERDIVLTQLKAHLAKAQNIMKK 1328
Query: 572 FQDQMRKRRIARF 584
+ DQ KRR+ F
Sbjct: 1329 YADQ--KRRLLEF 1339
>IMGA|Medtr6g077300.1 Ribonuclease H chr06_pseudomolecule_IMGAG_V3
15275252-15275869 F EGN_Mt090430 20090702
Length = 179
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 50/93 (53%)
Query: 80 NRAWKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLA 139
N W L FDG+ N G G VI +P G R+LF TNNMAEYEACI G+E +
Sbjct: 86 NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAID 145
Query: 140 SGAKEVEVIGDSLLVIEHANERWKVEEERLKPY 172
K +++ GDS LVI W+ +L PY
Sbjct: 146 MRIKHLDIYGDSALVINQIKGEWETHHAKLIPY 178
>IMGA|Medtr4g047400.1 Ribonuclease H chr04_pseudomolecule_IMGAG_V3
11037309-11036614 H EGN_Mt090430 20090702
Length = 231
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 83 WKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLASGA 142
W +Y DGS+N G+GA ++++ N V + L F +TNN AEYEA ++G+ A
Sbjct: 44 WIIYVDGSSNSKGSGAGVIVDNSNKIVIELSLGLSFTMTNNTAEYEAYLVGLRVAKDMEA 103
Query: 143 KEVEVIGDSLLVIEHANERWKVEEERLKPYVEYLLKKAALFDKITFTHIGRIHNRIPNAL 202
K V++ DS L + ++V+EE + YV + K FD + H+ R N N L
Sbjct: 104 KRVKICTDSQLAASQVSGEFQVQEEHRQEYVLVVQAKIKEFDSVEVEHVLREINTRENIL 163
Query: 203 ANLASA 208
+ LAS
Sbjct: 164 SKLAST 169
>IMGA|Medtr4g047190.1 Ribonuclease H chr04_pseudomolecule_IMGAG_V3
10902288-10901593 H EGN_Mt090430 20090702
Length = 231
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 83 WKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLASGA 142
W +Y DGS+N G+GA ++++ N V + L F +TNN AEYEA ++G+ A
Sbjct: 44 WIIYVDGSSNSKGSGAGVIVDNSNKIVIELSLGLSFTMTNNTAEYEAYLVGLRVAKDMEA 103
Query: 143 KEVEVIGDSLLVIEHANERWKVEEERLKPYVEYLLKKAALFDKITFTHIGRIHNRIPNAL 202
K V++ DS L + ++V+EE + YV + K FD + H+ R N N L
Sbjct: 104 KRVKICTDSQLAASQVSGEFQVQEEHRQEYVLVVQAKIKEFDSVEVEHVLREINTRENIL 163
Query: 203 ANLASA 208
+ LAS
Sbjct: 164 SKLAST 169
>IMGA|Medtr3g068370.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 15932594-15933743 H
EGN_Mt090430 20090702
Length = 165
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 398 VAVDYFSRWIEAQSYKTLTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQA-DVGQLLYR 456
+AV+Y S+W EA + T + + +Q IF R+GVP +++D GSHF + +L +
Sbjct: 77 IAVNYVSKWNEATASPTNDTRVAIKIFKQKIFPRFGVPRLVISDGGSHFISRQFENILKK 136
Query: 457 YKVEHHHSSPYRPQANGVVEAANKE 481
V+H ++PY PQ +G VE +N+E
Sbjct: 137 RGVKHIVATPYHPQTSGQVEVSNRE 161
>IMGA|Medtr6g028320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr06_pseudomolecule_IMGAG_V3 6407540-6406225 E
EGN_Mt090430 20090702
Length = 379
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 157/403 (38%), Gaps = 43/403 (10%)
Query: 273 MALNYVLADGELYRRAWDGMLLRCVSKKEGEEIMKKIHEGVCGTHLSGMSLARKVMRQGY 332
M Y DG LY + + +++ IM + H H SG+ + +
Sbjct: 1 MQQMYTFKDGLLY---FKDRIYVPDTQQWRTTIMTEFHSTPTAGH-SGLKPTLSRLSASF 56
Query: 333 FWMQMEGDCVNYVRHCKACQYHDNKSHLPAVE--LRPTA-PSWPFSAWGIDIIGKITPAA 389
W D ++R+C CQ NK L + L+P P + +D I + A
Sbjct: 57 LWPGTYTDVKQFIRNCHTCQ--QNKYMLTKKQGLLQPLPIPDKVWDELTMDFITHL--PA 112
Query: 390 SNGHQYILVAVDYFSRWIEAQSYKT-LTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQA 448
S H + V D S+++ + T A+ +A I +G+P I +D F +
Sbjct: 113 SFRHTVVWVICDRLSKYVHFIALPTKFAAQDLANRFSTEICRLHGIPKTITSDRDPLFLS 172
Query: 449 DVGQLLYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSKMCEKY-RSWAEKLPFALWG 506
+ L+R + +S+ Y P+ +G E N+ ++ L + + W + L A +
Sbjct: 173 QFWKELFRTQGTIMQYSTTYHPETDGQTEVVNRSLETYLRCFASDHPKHWFKFLHLAEFW 232
Query: 507 HRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVF-VEAGLTEEEWVKKRYEDLALLDG 565
+ ++F SPFE +YG ++ ++ + A L + +L
Sbjct: 233 YNSSFHTAIQMSPFEALYGRTPPTILDYVANQTQIPQLNANLQNRQ---------TILTT 283
Query: 566 RRLNARFQDQM------RKRRIARFYNKRVHPRALKNGH*VLIKLLDHEAQN---NPGGK 616
+ N R Q+ +KRR FY G VL++L + Q G K
Sbjct: 284 LKQNLRRTRQLMEVQANKKRRDCVFY----------PGDLVLLRLQPYRQQTVQRRVGPK 333
Query: 617 FKPNWHGPFRIQKLLVKGAAELITMEGKPVNRIINQDQMKRFY 659
+ GPF + + + A EL ++ +++ Q++ ++
Sbjct: 334 LSKRFFGPFIVIRRIGSVAYELDLPPSSKIHLVVHISQLRAYH 376
>IMGA|Medtr3g061900.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 14169077-14168364 H
EGN_Mt090430 20090702
Length = 237
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 337 MEGDCVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSAW---GIDIIGKITPAASNGH 393
M D NYV+ C+ CQ + +H L+P P AW +D + + P SNG
Sbjct: 1 MIKDVKNYVKTCEICQANKASNHKSYGLLQPLP--IPQQAWEDISMDFVTHLPP--SNGK 56
Query: 394 QYILVAVDYFSRWIEAQSYKT-LTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQADVGQ 452
I V VD FS+ T TA +A I+ +G+P IV+D F + +
Sbjct: 57 TTIWVIVDRFSKSAHFIPLPTHYTAMSLAPLFLTEIYRLHGMPKTIVSDRDRIFVSKFWK 116
Query: 453 LLYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSKMCEKYRS---WAEKLPFALWGHR 508
++R SS Y P+++G E N+ ++ L C Y + W L A + +
Sbjct: 117 EIFRLSGTTLAFSSAYHPESDGQTEVVNRILQTYLR--CFAYDAPNRWLNYLHLAEFWYN 174
Query: 509 TTFKLVNGASPFELVYG 525
++++ SPF+ VYG
Sbjct: 175 SSYQSSIRMSPFQAVYG 191
>IMGA|Medtr6g059710.1 GAG-POL precursor, putative
chr06_pseudomolecule_IMGAG_V3 10920548-10921569 E
EGN_Mt090430 20090702
Length = 99
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 293 LLRCVSKKEGEEIMKKIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQ 352
LL+C+ E + +HEG+ G HL G SLARK R GYFW+ M+ D + YV C CQ
Sbjct: 29 LLKCLVPSEVGYALADVHEGIAGQHLRGHSLARKEHRAGYFWLTMKYDAMEYVIKCDKCQ 88
>IMGA|Medtr3g026360.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 7063133-7061964 H
EGN_Mt090430 20090702
Length = 356
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 114/302 (37%), Gaps = 52/302 (17%)
Query: 332 YFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRPTA-PSWPFSAWGIDIIGKITPAAS 390
+FW M D +V C CQ ++ P L+P PS + +D I + P S
Sbjct: 14 FFWQGMRTDVQKFVSECSICQTTKYETKKPTGLLQPLPLPSAIWEDLSLDFITGLPP--S 71
Query: 391 NGHQYILVAVDYFSRWIEAQSYKTLTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQADV 450
+G ILV FS+ G + N S F+
Sbjct: 72 HGFSVILVVAGRFSK---------------------------GAHFGALPTNYSAFK--- 101
Query: 451 GQLLYRYKVEHHHSSPYRPQANGVVEAANKEIKR-ILSKMCEKYRSWAEKLPFALWGHRT 509
+L + S+ Y PQ +G E N+ +++ I S + K W LP A W + T
Sbjct: 102 -ELFKLCGTKLRMSTAYHPQTDGQTEVLNRVLEQYIRSFVHNKPNQWYSFLPLAEWSYNT 160
Query: 510 TFKLVNGASPFELVYGME-AVLPIELEKKSLRVFVEAGLTEEEWVKKRYEDLALLDGRRL 568
+ G SPF + Y E +P L S V+ L+ R + L +L + L
Sbjct: 161 SIHSATGFSPFYVTYDKEPPSIPNYLIGSSRIEAVDTLLSS------RQDILTILTKKLL 214
Query: 569 NARFQDQMRKRRIARFYNKRVHPRALKNGH*VLIKLLDHEAQNNPG---GKFKPNWHGPF 625
A + R+ + +K+ G V +KL + Q+ G K ++GP+
Sbjct: 215 KA-------QERMKHYADKKRRDITFNIGDFVYVKLRPYRQQSITGTTYSKLSKRYYGPY 267
Query: 626 RI 627
+I
Sbjct: 268 QI 269
>IMGA|Medtr2g120570.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V3
28388705-28395880 E EGN_Mt090430 20090702
Length = 412
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 87 FDGSA--NRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLASGAKE 144
FDG++ N AGA ++ + +G + + + TNN+AEY A I+GM L G
Sbjct: 245 FDGASKGNPGKAGAGAILRSKDGNLIYRVREGVGIATNNVAEYRAMILGMRHALKKGFTS 304
Query: 145 VEVIGDSLLVIEHANERWKVEEERLKPYVEYLLKKAALFDKITFTHIGRIHNRIPNALAN 204
+ + GDS LV + WKV+ E L + + F +H+ R N +A AN
Sbjct: 305 ICIQGDSKLVCMQIDGLWKVKNENLSTLYKVAKELKDKFVSFKISHVLRDLNSEADAQAN 364
Query: 205 LASAWQD 211
LA D
Sbjct: 365 LAVNLAD 371
>IMGA|Medtr3g162430.1 RNA-directed DNA polymerase (Reverse
transcriptase); Retrotransposon gag protein;
Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 42425246-42419198 E
EGN_Mt090430 20090702
Length = 1584
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 147/365 (40%), Gaps = 25/365 (6%)
Query: 304 EIMKKIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAV 363
++M + + SG+ + + W + D ++VR C+ CQ + +
Sbjct: 1024 DVMLTEYHSTPSSGYSGVQPTLARISASFSWPGIYADVKSFVRTCQVCQQNKYITTKKQG 1083
Query: 364 ELRP-TAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSRWIE--AQSYKTLTAKHM 420
L P P +D + + S GH I V D +++ A S K TA +
Sbjct: 1084 LLHPLDIPEKVREDLSMDFVTHL--PNSFGHTTIWVVCDRLTKFAHFIALSAK-FTAPDL 1140
Query: 421 ARFIEQNIFCRYGVPHHIVTDNGSHFQADVGQLLYRYK-VEHHHSSPYRPQANGVVEAAN 479
A I+ +G+P IV+D + F + + L++ + S+ Y P+ +G E N
Sbjct: 1141 ASRFSVEIYRLHGIPKSIVSDRDTLFVSAFWKELFKIQGTTLRFSTAYHPETDGQTEVVN 1200
Query: 480 KEIKRILSKMCEKY-RSWAEKLPFALWGHRTTFKLVNGASPFELVYGMEAVLPIE-LEKK 537
+ ++ L ++ + W + L A + ++F +PFE +YG + + +
Sbjct: 1201 RSLETYLRCFTSEHPKQWYKYLHLAELWYNSSFHSAIRMTPFEALYGRPPPRMTDYISGR 1260
Query: 538 SLRVFVEAGLTEEEWVKKRYEDLALLDGRRLNARFQDQMRKRRIARFYNKRVHPRALKNG 597
S + V+ LT + + N + + K+R+A NK A + G
Sbjct: 1261 SSLLSVDQILTHRQAIIT-------------NLKHNLHISKQRMAFQANKHRIDCAFQEG 1307
Query: 598 H*VLIKLLDHE---AQNNPGGKFKPNWHGPFRIQKLLVKGAAELITMEGKPVNRIINQDQ 654
VL+KL + Q+ K + GPF + + + A EL ++ + + Q
Sbjct: 1308 DLVLLKLQPYRQTTVQHRVSQKLAKRFFGPFTVHRRIGSMAYELRLPPDSKIHPVFHVSQ 1367
Query: 655 MKRFY 659
++ ++
Sbjct: 1368 LRAYH 1372
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 317 HLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSA 376
HLS L R M+Q + ++++ + V C C Y +K LP +L S +
Sbjct: 471 HLSNDRLLR--MQQHFPCIKVDSNSV-----CDICHYSRHKK-LP-FKLSMNKASHCYEL 521
Query: 377 WGIDIIGKITPAASNGHQYILVAVDYFSR--WIEAQSYKTLTAKHMARF---IEQNIFCR 431
DI G I+ + +GH+Y + A+D +SR WI K+ +K + F IE C+
Sbjct: 522 IHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCK 581
Query: 432 YGVPHHIVTDNGSHFQADVGQLLYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSKMC 490
+ TDNG F + Y K +EH S PQ NG VE ++ I + +
Sbjct: 582 VKT---VRTDNGPEF---LMPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALL 635
Query: 491 EKYRSWAEKLPFALWGH----------RTTFKLVNGASPFELVYGMEAVL 530
+ KLP W + R L+ SP+ L YG + L
Sbjct: 636 -----FQSKLPKVFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDL 680
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 317 HLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVELRPTAPSWPFSA 376
HLS L R M+Q + ++++ + V C C Y +K LP +L S +
Sbjct: 541 HLSNDRLLR--MQQHFPCIKVDSNSV-----CDICHYSRHKK-LP-FKLSMNKASHCYEL 591
Query: 377 WGIDIIGKITPAASNGHQYILVAVDYFSR--WIEAQSYKTLTAKHMARF---IEQNIFCR 431
DI G I+ + +GH+Y + A+D +SR WI K+ +K + F IE C+
Sbjct: 592 IHFDIWGPISTHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCK 651
Query: 432 YGVPHHIVTDNGSHFQADVGQLLYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSKMC 490
+ TDNG F + Y K +EH S PQ NG VE ++ I + +
Sbjct: 652 VKT---VRTDNGPEF---LMPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALL 705
Query: 491 EKYRSWAEKLPFALWGH----------RTTFKLVNGASPFELVYGMEAVL 530
+ KLP W + R L+ SP+ L YG + L
Sbjct: 706 -----FQSKLPKIFWSYSVLHAIYIINRIPTPLLQNKSPYFLRYGHDPDL 750
>IMGA|Medtr3g061740.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr03_pseudomolecule_IMGAG_V3 14037305-14035821 H
EGN_Mt090430 20090702
Length = 479
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%)
Query: 83 WKLYFDGSANRNGAGASIVIEAPNGEVTIMCKRLLFPITNNMAEYEACIMGMEALLASGA 142
W L DGS+N +GA +++E PN + R F +NN EYEA I GM GA
Sbjct: 406 WLLSVDGSSNLKDSGAGVILEGPNDLLIEQSLRFEFKASNNQVEYEALIAGMVLAQEMGA 465
Query: 143 KEVEVIGDSLLV 154
+ + DS LV
Sbjct: 466 ENLRAKSDSQLV 477
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 31/194 (15%)
Query: 348 CKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSR-- 405
C C + K LP A S F DI G ++ + + H+Y L +D +SR
Sbjct: 522 CDICHFAKQKK-LPFSNSISVA-SIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRYV 579
Query: 406 WIEAQSYKTLTAKHMARFIEQNIFCRYGV-PHHIVTDNGSHFQADVGQLLYRY----KVE 460
WI K+ ++H+ FI I +Y + P + +DNG F LL+ + +
Sbjct: 580 WIVLLKSKSEVSQHVKNFINL-IQTQYNITPKTVRSDNGPEF------LLHSFYASKGIV 632
Query: 461 HHHSSPYRPQANGVVEAANKEIKRILSKMCEKYRSWAEKLPFALWGH----------RTT 510
HH S PQ NG VE ++ I + + + KLP + W + R T
Sbjct: 633 HHRSCVETPQQNGRVERKHQHILNVGRALL-----YQSKLPVSYWSYALLHATFIINRVT 687
Query: 511 FKLVNGASPFELVY 524
++ SP++L++
Sbjct: 688 SPTLHNKSPYQLLH 701
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 25/229 (10%)
Query: 348 CKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSR-- 405
C C + K HLP + + + F +DI G ++ ++ +GH+Y L VD SR
Sbjct: 498 CDICHFAKQK-HLP-FSISTSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRFL 555
Query: 406 WIEAQSYKTLTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQADVGQLLYRYKVEHHHSS 465
WI + K+ + H+ FI+ + P I +DNG F + + H S
Sbjct: 556 WIISLKTKSGVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFL--ILSFYESLGILHQKSC 613
Query: 466 PYRPQANGVVEAANKEIKRILSKMCEKYRSWAEKLPFALWGH----------RTTFKLVN 515
PQ NG VE + I + + + KLP + W + R L+
Sbjct: 614 VETPQQNGRVERKHHHILNVGRALL-----YQSKLPASYWSYALLHAVFLINRKPTPLLE 668
Query: 516 GASPFELVYGMEAVLPIELEKKSLRVFVEAGLTEEEWVKKRYEDLALLD 564
G SP+ Y + P +++ + A T K Y+ LLD
Sbjct: 669 GQSPY---YALHHKFP-DIDTFKNQASTRARKTVFLGYKSGYKGFILLD 713
>IMGA|Medtr4g073750.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 14702670-14703735 H
EGN_Mt090430 20090702
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 45/332 (13%)
Query: 305 IMKKIHEGVCGTHLSGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSHLPAVE 364
++K H G H +++ Y W M D V C+ CQ + ++
Sbjct: 35 LLKDYHSSAVGGHSRFFRTYKRIYAIIY-WEGMRKDIQQIVATCETCQLNKYQT------ 87
Query: 365 LRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSRWIEAQSYKTLTAKHMARFI 424
L PT G + P + +++D+ +A K +K +A
Sbjct: 88 LSPT--------------GLLQPLPIPTQVWTDISMDFIEGLPKAHGKK---SKDVAESF 130
Query: 425 EQNIFCRYGVPHHIVTDNGSHFQADVGQLLYRYK-VEHHHSSPYRPQANGVVEAANKEIK 483
+ + +G P IV+D F + L+R + SS Y PQ +G E AN+ ++
Sbjct: 131 IKEVIKLHGFPSTIVSDRDKIFLSHFWSELFRTAGTKLKFSSAYHPQTDGQTEVANRCLE 190
Query: 484 RILSKMC-EKYRSWAEKLPFALWGHRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVF 542
L + K + W + L +A + T + +PF+ +YG + P+ L+ ++
Sbjct: 191 TYLRCLTGTKPKQWRKWLGWADFWFNTNYNSSLKQTPFKTLYGRDP--PLLLKGTTIPSL 248
Query: 543 VEA--GLTEEEWVKKRYEDLALLDGRRLNARFQDQMRKRRIARFYNKRVHPRALKNGH*V 600
VE LT+E D L D ++ + +QM+ + +K NG V
Sbjct: 249 VEEVNVLTDE-------RDQILHDLKQNLVKALEQMKA-----YADKSRRSVNFTNGDWV 296
Query: 601 LIKLLDHEAQN---NPGGKFKPNWHGPFRIQK 629
+KL + ++ K ++GP++I K
Sbjct: 297 YLKLQPYRLKSLAKKRNEKLNHRFYGPYQIIK 328
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 374 FSAWGIDIIGKITPAASNGHQYILVAVDYFSR--WIEAQSYKTLTAKHMARFI--EQNIF 429
F +DI G + +Y + VD FS+ W + S K+ + FI +N F
Sbjct: 20 FELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSCKSNAFHVLKAFILMVENQF 79
Query: 430 CRYGVPHHIVTDNGSHFQADVGQLLYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSK 488
I +DNG F ++ L ++ K + H S PY PQ NGVVE +K I
Sbjct: 80 S--TTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQNGVVERKHKFILETARA 137
Query: 489 MCEKYRSWAEKLPFALWG--HRTTF 511
+ + KLP W HRT F
Sbjct: 138 LL-----FQSKLPVKYWSEFHRTKF 157
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 21/189 (11%)
Query: 348 CKACQYHDNKSHLPAVELRPTAPSWPFSAWGIDIIGKITPAASNGHQYILVAVDYFSR-- 405
C C + K HLP A S F DI G I+ ++ +GH+Y L +D SR
Sbjct: 525 CDICHFSKQK-HLPFSSSLSHA-STNFELLHFDIWGPISISSVHGHRYFLTILDDHSRFL 582
Query: 406 WIEAQSYKTLTAKHMARFIEQNIFCRYGVPHHIVTDNGSHFQADVGQLLYRYKVEHHHSS 465
WI K+ + H+ FI + P ++ +DNG F + + + H S
Sbjct: 583 WIILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEFL--LNDFYSSHGIIHQKSC 640
Query: 466 PYRPQANGVVEAANKEIKRILSKMCEKYRSWAEKLPFALWGH----------RTTFKLVN 515
PQ NG VE ++ I + + + KLP + W + R +++
Sbjct: 641 VETPQQNGRVERKHQHILNVGRALL-----YQSKLPPSFWSYAILHAVFLINRVPTHVLH 695
Query: 516 GASPFELVY 524
SP+ +++
Sbjct: 696 NQSPYHVLF 704
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 374 FSAWGIDIIGKITPAASNGHQYILVAVDYFSR--WIEAQSYKTLTAKHMARFIEQNIFCR 431
F DI G ++ + +GH+Y L VD FSR W+ K+ + H+ F+ I
Sbjct: 577 FELLHFDIWGPLSVTSVHGHKYFLTIVDDFSRFLWVILLKNKSEVSNHVKNFVVL-IHTH 635
Query: 432 YGV-PHHIVTDNGSHFQADVGQLLYRYKVEHHHSSPYRPQANGVVEAANKEIKRILSKMC 490
Y + P +I +DNG F + + + H S PQ NG VE ++ I + +
Sbjct: 636 YQITPKYIRSDNGPEFL--IPEFYASKGIIHQKSCVETPQQNGRVERKHQHILNVARALL 693
Query: 491 EKYRSWAEKLPFALWGH----------RTTFKLVNGASPFELVY 524
+ KLP W + + L SP++L+Y
Sbjct: 694 -----FQSKLPNFFWSYAVIHAVFLINKVPTPLFKQKSPYQLLY 732
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 374 FSAWGIDIIGKITPAASNGHQYILVAVDYFSR--WIEAQSYKTLTAKHMARFIE--QNIF 429
F DI G + + +GH+Y L VD +R WI K H+ FI +N F
Sbjct: 40 FQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWIILLKTKAEVPMHIKNFIVMIENQF 99
Query: 430 CRYGVPHHIVTDNGSHFQADVGQLLYRYKVEHHHSSPYRPQANGVVEAANKEIKRILSKM 489
+ P I TDNGS F + + + H S PQ NG VE ++ I I +
Sbjct: 100 --HVTPKIIRTDNGSEFL--LHEFYASKGILHQSSCVETPQQNGRVERKHQHILNIGRAL 155
Query: 490 CEKYRSWAEKLPFALWGH----------RTTFKLVNGASPFELVY 524
+ KLP + W + R T +++ SP+ L+Y
Sbjct: 156 L-----YQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYHLLY 195
>IMGA|AC233082_1.1 Polynucleotidyl transferase, Ribonuclease H fold
AC233082.3 16225-8671 H EGN_Mt090430 20090702
Length = 695
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 141/349 (40%), Gaps = 43/349 (12%)
Query: 319 SGMSLARKVMRQGYFWMQMEGDCVNYVRHCKACQYHDNKSH--LPAVELRPTAPSWPFSA 376
+G ++AR + ++W + +V++C CQ N++ L ++ P PS +
Sbjct: 197 TGPTVAR--LAASFYWPGLYTAVKEFVKNCATCQQSKNQTQKKLGLLQALP-IPSQVWEE 253
Query: 377 WGIDIIGKITPAASNGHQYILVAVDYFSRWIEAQSYKT-LTAKHMARFIEQNIFCRYGVP 435
+D I + S GH I V D ++++ + + TA+ +A I +G+P
Sbjct: 254 LTMDFITHL--PNSFGHTVIWVICDRLTKYVHFIALPSKFTAEDLANRFSVEICRLHGIP 311
Query: 436 HHIVTDNGSHFQADVGQLLYRYK-VEHHHSSPYRPQANGVVEAANKEIKRILSKMCEKYR 494
I++D F + + L++ + + S+ Y P+ +G E N+ ++ L R
Sbjct: 312 KTIISDRDPLFLSKFWKELFKTQGTQLRFSTAYHPETDGQTEVVNRTLESYL-------R 364
Query: 495 SWAEKLPFALWGHRTTFKLVNGASPFELVYGMEAVLPIELEKKSLRVFVEAGLTE-EEWV 553
+ H +T +PF+ +YG K V + +T EE +
Sbjct: 365 CF----------HNSTVHSATQLTPFQALYGRPP------PKIPDYVTGSSSITSLEESL 408
Query: 554 KKRYEDLALLDGRRLNARFQDQMRKRRIARFYNKRVHPRALKNGH*VLIKLLDH---EAQ 610
+ R+ L L +R Q +++ NK+ G VL++L + Q
Sbjct: 409 QARHLVLQQLKKNLTKSRKQMEVQA-------NKKRRDHTFNVGDLVLLRLQPYRQSTVQ 461
Query: 611 NNPGGKFKPNWHGPFRIQKLLVKGAAELITMEGKPVNRIINQDQMKRFY 659
K + GPF + + + A +L ++ +++ ++ +Y
Sbjct: 462 RRSSQKLAKRFFGPFHVLERIGSVAYKLDLPPDSKIHPVVHISLLRPYY 510