Jatropha Genome Database

JcCA0000041.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0000041.30 + phase: 0 
         (493 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g071040.1 Acetyl-coenzyme A carboxylase carboxyl tran...   119   4e-27
IMGA|Medtr3g110030.1 Acetyl-coenzyme A carboxylase carboxyl tran...    77   3e-14
IMGA|Medtr8g071030.1 Acetyl-coenzyme A carboxylase carboxyl tran...    71   1e-12
IMGA|Medtr5g009320.1 Acetyl-coenzyme A carboxylase carboxyl tran...    70   3e-12
IMGA|Medtr3g114160.1 Acetyl-coenzyme A carboxylase carboxyl tran...    57   2e-08

>IMGA|Medtr8g071040.1 Acetyl-coenzyme A carboxylase carboxyl
           transferase subunit beta, putative
           chr08_pseudomolecule_IMGAG_V3 13967460-13967796 E
           EGN_Mt090430 20090702
          Length = 94

 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 60/72 (83%)

Query: 216 ITQKYKHLWVQCENCYGLNYKKFLKSRMNICEQCGYHLKMSSSDRIELSIDLGTWNPMDE 275
           I + + HLWV C++CYG NYK+F KS+MNICE CG HLKMSSSDRIEL ID GTWNPMDE
Sbjct: 22  IRKDFSHLWVACDSCYGNNYKRFFKSKMNICEYCGCHLKMSSSDRIELLIDPGTWNPMDE 81

Query: 276 DMVSLDPIEFHS 287
           DM  +DPIEF+S
Sbjct: 82  DMFPVDPIEFNS 93


>IMGA|Medtr3g110030.1 Acetyl-coenzyme A carboxylase carboxyl
           transferase subunit beta, putative
           chr03_pseudomolecule_IMGAG_V3 27667702-27667363 H
           EGN_Mt090430 20090702
          Length = 55

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/45 (80%), Positives = 39/45 (86%)

Query: 243 MNICEQCGYHLKMSSSDRIELSIDLGTWNPMDEDMVSLDPIEFHS 287
           MNICE  G HLKMSSSDRI+L ID GTWNPMDEDM S+DPIEF+S
Sbjct: 1   MNICEYYGCHLKMSSSDRIKLLIDPGTWNPMDEDMFSVDPIEFNS 45


>IMGA|Medtr8g071030.1 Acetyl-coenzyme A carboxylase carboxyl
           transferase subunit beta, related
           chr08_pseudomolecule_IMGAG_V3 13965925-13967458 E
           EGN_Mt090430 20090702
          Length = 283

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 70/174 (40%), Gaps = 64/174 (36%)

Query: 1   MEKRWFNSILSNVELGYRCRLSKSMDSFSPLENTSISEDP---------ILNDTDKNTHC 51
           MEK WFNS++ N  L YRC LSKS+DSF P+EN S++EDP         IL D D   H 
Sbjct: 1   MEKWWFNSMMFNRGLEYRCGLSKSIDSFGPIENNSVNEDPSILTDMDNIILIDMDNTIHV 60

Query: 52  WXXXXXXXXXXVDHLVGIRNFSVDETFLVRDSNRDSYSIYFDIENQVFEIETDHSFLNEL 111
                      +   + I N   D+TFLV DSN  SY IY                    
Sbjct: 61  DVRVVKTIVRILVIDMNIPNLLSDKTFLVSDSN--SYFIY-------------------- 98

Query: 112 EXXXXXXXXXXXXXXXXXXGDFHYDHYMSDTKYSWNNYINSCIDNYLRSQICID 165
                                             WNN INSCI+ Y+ S+I ID
Sbjct: 99  ---------------------------------DWNNIINSCIEGYMLSEIGID 119


>IMGA|Medtr5g009320.1 Acetyl-coenzyme A carboxylase carboxyl
           transferase subunit beta, putative
           chr05_pseudomolecule_IMGAG_V3 2001419-2001845 E
           EGN_Mt090430 20090702
          Length = 69

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 7/56 (12%)

Query: 204 DLTIRESSNDLDITQKYKHLWVQCENCYGLNYKKFLKSRMNICEQCGYHLKMSSSD 259
           D T  ESSNDLD T+KYKHLWV+CENCYGLNYK       NI  +  YHLKMS S+
Sbjct: 21  DFTKTESSNDLDETKKYKHLWVECENCYGLNYK-------NIEIKNEYHLKMSGSN 69


>IMGA|Medtr3g114160.1 Acetyl-coenzyme A carboxylase carboxyl
          transferase subunit beta, putative
          chr03_pseudomolecule_IMGAG_V3 28829533-28829745 E
          EGN_Mt090430 20090702
          Length = 70

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 35/48 (72%), Gaps = 1/48 (2%)

Query: 1  MEKRWFNSILSNVELGYRCRLSKSMDSFSPLENTSISEDP-ILNDTDK 47
          MEK WFNS++ N  L YRC LSKS+D+F P+EN S++ED  IL D D 
Sbjct: 1  MEKWWFNSMMFNRGLEYRCGLSKSIDTFGPIENNSVNEDTSILTDMDN 48