Jatropha Genome Database
- JcCA0000015.50
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0000015.50 - phase: 0 /TE
(957 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse transc... 430 e-120
IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse transc... 279 6e-75
IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse transc... 275 6e-74
IMGA|Medtr8g024620.1 hypothetical protein chr08_pseudomolecule_I... 233 3e-61
IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse transc... 226 6e-59
IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H... 225 1e-58
IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H... 213 3e-55
IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse transc... 203 3e-52
IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse transc... 201 2e-51
IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse transcri... 192 8e-49
IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse transc... 190 3e-48
IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase... 187 3e-47
IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse transcri... 184 2e-46
IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase... 182 7e-46
IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse transc... 179 4e-45
IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse transc... 179 8e-45
IMGA|AC225611_8.1 contains similarity to reverse trancriptase, r... 178 1e-44
IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse transc... 172 8e-43
IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse transc... 159 7e-39
IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse transc... 150 4e-36
IMGA|Medtr8g037100.1 hypothetical protein chr08_pseudomolecule_I... 147 3e-35
IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse transc... 147 4e-35
IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse transc... 144 2e-34
IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse transc... 141 2e-33
IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse transc... 139 5e-33
IMGA|Medtr8g105650.1 reverse transcriptase, putative; 100033-105... 139 9e-33
IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse transc... 135 7e-32
IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse transc... 127 2e-29
IMGA|Medtr1g117580.1 hypothetical protein chr01_pseudomolecule_I... 127 3e-29
IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse transc... 127 4e-29
IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse transc... 126 6e-29
IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse transc... 121 2e-27
IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putat... 120 3e-27
IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse transc... 119 8e-27
IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750, ... 119 1e-26
IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H... 118 2e-26
IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750, ... 115 1e-25
IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse transc... 115 1e-25
IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H... 114 2e-25
IMGA|Medtr2g114260.1 hypothetical protein chr02_pseudomolecule_I... 111 2e-24
IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V... 107 3e-23
IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse transc... 106 5e-23
IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H... 99 1e-20
IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse transc... 97 3e-20
IMGA|Medtr7g084960.1 RNA-directed DNA polymerase (reverse transc... 96 6e-20
IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse transc... 96 1e-19
IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse transc... 92 9e-19
IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase... 92 1e-18
IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase... 92 1e-18
IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse transcri... 91 2e-18
IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse transc... 90 6e-18
IMGA|Medtr5g068610.1 Polynucleotidyl transferase, Ribonuclease H... 87 5e-17
IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse transcrip... 86 8e-17
IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse transc... 86 1e-16
IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse transc... 86 1e-16
IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse transc... 86 1e-16
IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V... 85 1e-16
IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3 220... 83 5e-16
IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse transc... 83 5e-16
IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse transc... 82 9e-16
IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse transc... 82 2e-15
IMGA|Medtr4g084240.1 Polynucleotidyl transferase, Ribonuclease H... 81 2e-15
IMGA|Medtr1g117590.1 Polynucleotidyl transferase, Ribonuclease H... 80 6e-15
IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial chr... 77 3e-14
IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V... 77 3e-14
IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase... 77 3e-14
IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease ... 77 3e-14
IMGA|Medtr6g024980.1 Putative ribonuclease H protein At1g65750, ... 77 6e-14
IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse transc... 76 8e-14
IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse transc... 76 9e-14
IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse transc... 76 9e-14
IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse transc... 75 1e-13
IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.... 73 6e-13
IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse transc... 73 6e-13
IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase... 73 6e-13
IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse transc... 73 7e-13
IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse transc... 73 8e-13
IMGA|Medtr7g068050.1 hypothetical protein chr07_pseudomolecule_I... 72 2e-12
IMGA|Medtr2g056130.1 hypothetical protein chr02_pseudomolecule_I... 72 2e-12
IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase... 72 2e-12
IMGA|Medtr7g127430.1 hypothetical protein chr07_pseudomolecule_I... 71 2e-12
IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fo... 71 2e-12
IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse transc... 71 2e-12
IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putat... 70 6e-12
IMGA|Medtr3g043440.1 Polynucleotidyl transferase, Ribonuclease H... 69 9e-12
IMGA|Medtr3g030670.1 Polynucleotidyl transferase, Ribonuclease H... 69 1e-11
IMGA|Medtr7g105970.1 Polynucleotidyl transferase, Ribonuclease H... 67 4e-11
IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse transc... 66 9e-11
IMGA|Medtr7g071100.1 Polynucleotidyl transferase, Ribonuclease H... 65 1e-10
IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H... 65 1e-10
IMGA|Medtr3g103220.1 RNA-directed DNA polymerase (reverse transc... 65 2e-10
IMGA|Medtr4g033120.1 Polynucleotidyl transferase, Ribonuclease H... 65 2e-10
IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related chr08_... 64 3e-10
IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 60 4e-09
IMGA|Medtr5g025230.1 RNA-directed DNA polymerase (reverse transc... 60 5e-09
IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse transc... 60 5e-09
IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse transc... 60 6e-09
IMGA|Medtr3g127630.1 Polynucleotidyl transferase, Ribonuclease H... 60 7e-09
IMGA|Medtr8g079170.1 Polynucleotidyl transferase, Ribonuclease H... 60 7e-09
IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H... 59 9e-09
IMGA|Medtr5g088720.1 Polynucleotidyl transferase, Ribonuclease H... 59 1e-08
IMGA|Medtr8g133770.1 hypothetical protein chr08_pseudomolecule_I... 59 1e-08
IMGA|Medtr1g025190.1 RNA-directed DNA polymerase, related chr01_... 59 1e-08
IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse transc... 59 1e-08
IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, relat... 58 2e-08
IMGA|Medtr5g084360.1 Polynucleotidyl transferase, Ribonuclease H... 58 2e-08
IMGA|Medtr5g065160.1 Polynucleotidyl transferase, Ribonuclease H... 58 2e-08
IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse transc... 57 3e-08
IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 57 3e-08
IMGA|Medtr8g070830.1 hypothetical protein chr08_pseudomolecule_I... 57 4e-08
IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse transcrip... 56 8e-08
IMGA|Medtr4g036130.1 Polynucleotidyl transferase, Ribonuclease H... 56 1e-07
IMGA|Medtr5g105670.1 Polynucleotidyl transferase, Ribonuclease H... 55 1e-07
IMGA|Medtr5g079690.1 Polynucleotidyl transferase, Ribonuclease H... 55 2e-07
IMGA|Medtr4g107070.1 Polynucleotidyl transferase, Ribonuclease H... 54 3e-07
IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt0904... 54 3e-07
IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt09043... 54 3e-07
IMGA|Medtr8g121740.1 hypothetical protein chr08_pseudomolecule_I... 54 4e-07
IMGA|Medtr3g106940.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 54 5e-07
IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H... 53 8e-07
IMGA|Medtr3g030410.1 Polynucleotidyl transferase, Ribonuclease H... 53 9e-07
IMGA|Medtr1g065590.1 Polynucleotidyl transferase, Ribonuclease H... 53 9e-07
IMGA|Medtr8g074720.1 Polynucleotidyl transferase, Ribonuclease H... 52 1e-06
IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse transc... 52 2e-06
IMGA|Medtr7g041090.1 Polynucleotidyl transferase, Ribonuclease H... 51 2e-06
IMGA|AC235675_13.1 RNA-directed DNA polymerase (reverse transcri... 51 3e-06
IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase chr04_... 51 3e-06
IMGA|Medtr6g009380.1 hypothetical protein chr06_pseudomolecule_I... 51 3e-06
IMGA|Medtr1g149770.1 contains similarity to reverse trancriptase... 51 3e-06
IMGA|Medtr3g013410.1 RNA-directed DNA polymerase (reverse transc... 51 3e-06
IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse transc... 50 6e-06
IMGA|Medtr4g073720.1 Polynucleotidyl transferase, Ribonuclease H... 50 6e-06
IMGA|Medtr5g084580.1 RNA-directed DNA polymerase (reverse transc... 50 7e-06
IMGA|Medtr5g100090.1 Polynucleotidyl transferase, Ribonuclease H... 50 7e-06
IMGA|Medtr3g157320.1 hypothetical protein chr03_pseudomolecule_I... 50 7e-06
IMGA|Medtr1g064980.1 RNA-directed DNA polymerase ; Ribonuclease ... 49 8e-06
IMGA|Medtr2g129530.1 RNA-directed DNA polymerase (reverse transc... 49 8e-06
IMGA|Medtr1g066070.1 hypothetical protein chr01_pseudomolecule_I... 49 1e-05
IMGA|Medtr5g083400.1 Polynucleotidyl transferase, Ribonuclease H... 49 1e-05
>IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse
transcriptase); Hemopexin; Polynucleotidyl transferase,
Ribonuclease H fold chr02_pseudomolecule_IMGAG_V3
27457173-27452820 H EGN_Mt090430 20090702
Length = 1147
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 257/737 (34%), Positives = 383/737 (51%), Gaps = 115/737 (15%)
Query: 226 LGFXPALGDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLF 285
+GF P + + V V Y V VN D VGPI P RGLRQG PLSPYLFILCAEG+S L
Sbjct: 417 MGFNPIWIKWMRMSVTMVSYHVLVNDDRVGPIYPGRGLRQGDPLSPYLFILCAEGMSTLI 476
Query: 286 SKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVN 345
+++ L G +V + AP +S+LLFAD S FF A+ + +K+IL TY AS Q +N
Sbjct: 477 KQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALKDILDTYANASDQLIN 536
Query: 346 RQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKL 405
QKS+I+FS N KN + + V + +YLGLPS+IGR ++ IF+++KD +
Sbjct: 537 MQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNR 596
Query: 406 VSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWG------G 459
+SG + K+LS+AGKEVLIK+VAQAIPS+CMS FL+ SI ++++++NS+WWG G
Sbjct: 597 ISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRG 656
Query: 460 KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRN 519
+RW+SWERL + KE G+GFRH+ F+LA+ GK+ W FL N +++ + N
Sbjct: 657 GIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNEN 716
Query: 520 FLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILP 579
FL A +G +PS+VWR I +++ + +G++WRI DG +
Sbjct: 717 FLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGDGSTTAT-------------------- 756
Query: 580 GFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIY 639
VS LI R+WN PLI FN V+ I IPL Q+D +IW + G+Y
Sbjct: 757 ------VSHLIDAQ-TRSWNEPLIRNNFNLRDVDEILKIPLLHCEQNDAIIWRFDKKGVY 809
Query: 640 SMKSGHRIVASLYVDIEDAWR-SSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMG 698
S+K+ +R+ + ++ D W+ LWS+ IPPKV+HF+WR RD L + L
Sbjct: 810 SVKNAYRVCVDVLIN-RDEWKVEGDRNKLWSLPIPPKVKHFMWRLGRDCLPNRQRL---- 864
Query: 699 LELDTGCDYYGTTETLVRALVECPRVSFCWQLFGIQLTIGNFSTFLQLLEHLHKVWENAF 758
C G++L++ +F
Sbjct: 865 -----NCK-------------------------GVRLSLKQLVSF--------------- 879
Query: 759 FENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAG 818
M WS+W N W E P Q++ RA+++L +W
Sbjct: 880 ----SMTSWSIWKRRNLKLWENKIESPDQILQRAQAVLNAW------------------- 916
Query: 819 SQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQA 878
G K N DAT+ ++ ++ AI+ + FV A T+ L+ SPA +EA
Sbjct: 917 -------AGLLKCNIDATISTTDQTISMGAILRDSEGRFVGAMTNVLKASMSPAESEAWG 969
Query: 879 LRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLA 938
L L W+ + + ++ E+DC + + ++ + SE+G+++ C+ LL N +
Sbjct: 970 LHQGLKWITT-LGHQRVIFESDCKMLVDDVHSNNVNHSEYGLIVKNCRSLLQIFNNHEVV 1028
Query: 939 WIRRQANDIAYVLAKSV 955
+ RRQAN A+ LAK+
Sbjct: 1029 FTRRQANGSAHALAKTA 1045
>IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912
E EGN_Mt090430 20090702
Length = 566
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 174/525 (33%), Positives = 271/525 (51%), Gaps = 50/525 (9%)
Query: 254 VGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFAD 313
VGPI+P RGLRQG PLSPYLFIL EGLS L K + G + G +V R AP +S+LLFAD
Sbjct: 4 VGPIVPGRGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFAD 63
Query: 314 GSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSNTSELNKNAVKGIFGVIA 373
F A+ +A + IL TYEAASGQ +N KS++FFS N S + + I GV
Sbjct: 64 NCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRH 123
Query: 374 PLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSF 433
+ G+YLGLPS+I R++ +FSF+KD + K ++ W + LSKAGKEV+IK+V Q+IPS+
Sbjct: 124 VMGTGKYLGLPSMIDRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSY 183
Query: 434 CMSSFLISVSILVELQRLMNSYWWGGK-----MRWLSWERLCVAKEEXGLGFRHLRSFNL 488
MS +L+ S++ ++++++N++WWGG+ ++W++WE + KE G+GFR+ ++FN+
Sbjct: 184 IMSIYLLPSSVIDDIEKMVNAFWWGGRSNNRGIKWMAWEHMACPKEFGGMGFRNFKAFNI 243
Query: 489 ALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSA---GVGRDPSFV---W-RG------ 535
A++ K+ W L SL P +FL A G G+ S + W RG
Sbjct: 244 AMVAKQGWSLLSTPESLVARVFKSRYFPRSSFLGAKLVGNGQQVSVMNDPWVRGVQGSCI 303
Query: 536 ---------ICAAKDAICSGFR-WRIEDGQSINVWTKPWLLRDN--EFWVHLPILPGFEH 583
I + D I R W ++ +S L D+ + + P+ +
Sbjct: 304 QSPQSQGVHILSVSDLIADEDRVWDVDKIES--------LFPDDMVQAILDTPLFAEVHN 355
Query: 584 IRVSDLILTHGA-----------RAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWH 632
R++ ++ +G+ W++ I LF +V+ I PL V +D + W
Sbjct: 356 DRITWMVECNGSCYILIGSMLKKSVWDVDKIESLFPDDMVQAILDTPLFAEVHNDRITWM 415
Query: 633 WTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKA 692
+G Y++ +G++I + + WK +W + K R+ LWR CR + +
Sbjct: 416 VECNGRYTINTGYKIAMMELLHTDRFHVEEEWKRIWKVNSHHKARNLLWRICRGCVPTRL 475
Query: 693 TLARMGLELDTGCDYYGT-TETLVRALVECPRVSFCWQLFGIQLT 736
L ++ + C T E A V C W G+ +
Sbjct: 476 RLQSRHVQCEVICPSCDTVVEDDWHAFVGCTVACESWYWAGLSIV 520
>IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse
transcriptase); Histone H2B; Histone-fold;
Polynucleotidyl transferase, Ribonuclease H fold
chr01_pseudomolecule_IMGAG_V3 17931605-17934389 E
EGN_Mt090430 20090702
Length = 802
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 218/747 (29%), Positives = 342/747 (45%), Gaps = 42/747 (5%)
Query: 226 LGFXPALGDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLF 285
+GF P L IM CV +V + V + G P+RGLRQG PLSPYLFILCAE LS L
Sbjct: 1 MGFPPNLVKTIMNCVTTVSFSVLIIGKPSNKFYPQRGLRQGDPLSPYLFILCAEVLSGLL 60
Query: 286 SKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVN 345
+K +G+ G +++ AP +S+L FAD SLFF + +A + + L Y+ SGQ VN
Sbjct: 61 TKGLADGKFHGIQIAPTAPPISHLFFADDSLFFCRSEPKEANFLMDTLQLYQDMSGQKVN 120
Query: 346 RQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYG----RYLGLPSLIGRERRHIFSFLKDX 401
KS + F+ + E +K F V P+N +YLGLP+ GR + F+++ D
Sbjct: 121 LDKSKMVFNPSLRE----DIKKDFQVQLPINISNKITKYLGLPTQFGRSKVQDFNYIMDK 176
Query: 402 VRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG-- 459
V K + GW ++ LS AG+ VLIKAV QAI F MS FL+ ++R + +WWG
Sbjct: 177 VIKKMKGWKERNLSFAGRSVLIKAVVQAIHVFVMSCFLLPQETCDNIERAVCKFWWGSNG 236
Query: 460 ---KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXP 516
K+ W+ +++ + + GLGFR+LR FN+ +L K+ WR N +L P
Sbjct: 237 DNKKIHWVKKDKVLRSTIDGGLGFRNLRDFNMVMLAKQIWRLHTNQQALISKVFKAKYYP 296
Query: 517 SRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLP 576
+ + L A VG PS+ WR A + G ++ +G SI++W WL F V L
Sbjct: 297 TTDVLQATVGYAPSYAWRSFHQAIWILNKGCCMKVGNGASIDIWKDQWLHNQIGFKV-LT 355
Query: 577 ILPGFEHI-RVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTD 635
PG +++ RV DLI+ + R WN LI +F + E + + L + + L +
Sbjct: 356 HNPGVDNVERVQDLIIDNPQR-WNKDLIEHIFLFFLKEPLFNKSLLPSTKARTL----SC 410
Query: 636 SGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLA 695
I ++++ A+L ++ +WS+ P+ R LWR L V+ L
Sbjct: 411 GCIMNLENTLLKRATLLSRFGRPNKTK----IWSLDTIPRHRVLLWRIINKALPVREELH 466
Query: 696 RMGLELDTGCDYYGT-TETLVRALV--ECPRVSFCWQLFGIQLTIGNFSTFLQLLEHLHK 752
+ G+ C ET+ + +C R GI + F+ L
Sbjct: 467 KRGINCSLLCPRCEEGIETIDHLFLNCDCSRRELFGSNLGINFQSNTTADFVNWLISFIY 526
Query: 753 VWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSG-- 810
+ N L+S+W + N+ + V+ RA + ++S++KA+ P
Sbjct: 527 TNDKPPIINLAALLYSIWHARNQKVFEDKTIPEDVVIHRACNSISSFRKARSGPPDHHHR 586
Query: 811 --------TGTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAAT 862
T P ++W P G K+N DA LS + I N + T
Sbjct: 587 YNQIHPALRSTRAPEHTKWVKPQQGVIKLNTDAN-LSVPDVWGIGVIARNDADEVEACGT 645
Query: 863 SSLQGCSSPAVAEAQAL-RTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEF-GV 920
G P AEA + + VL L SG+ ++ E D ++ + +D + G
Sbjct: 646 WHRPGFMCPLTAEAWGVYQAVLFALESGFQ--QVLFENDNEKLISILTRKDEDHRTYLGT 703
Query: 921 VISECKLLLVQLPNVTLAWIRRQANDI 947
+ L + + ++R+ N +
Sbjct: 704 LTQSIVSLSSRFSICGFSHVKREGNSV 730
>IMGA|Medtr8g024620.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E
EGN_Mt090430 20090702
Length = 587
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/619 (29%), Positives = 272/619 (43%), Gaps = 98/619 (15%)
Query: 368 IFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVA 427
+F +A N G L + G + S K W+ + LSKAG+EV+IK+V
Sbjct: 7 VFQKVAITNPGSSLAFHDIAGTIISRVLS-------KWTWIWSSQCLSKAGREVMIKSVL 59
Query: 428 QAIPSFCMSSFLISVSILVELQRLMNSYWWG--GKMR----WLSWERLCVAKEEXGLGFR 481
Q IPS+ MS FL+ +++ E+++++N +WWG G R WLSW++L V K G+GF+
Sbjct: 60 QVIPSYIMSVFLLPTTLVDEIEKMVNGFWWGHGGSRRKGIHWLSWDKLTVHKNYGGMGFK 119
Query: 482 HLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKD 541
L +FNL +LGK+ W+F TN L PS ++L A +G PSFVWR I +AK
Sbjct: 120 DLTAFNLVMLGKQGWKFQTQTNCLVSKLFKARYFPSSDYLGAKLGHKPSFVWRSIFSAKR 179
Query: 542 AICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLP 601
I G + +GQ+ V +H ++ LI H R WN
Sbjct: 180 VIREGGKCVSGEGQNSEV---------------------IQHAKIHSLI-DHNLRCWNQD 217
Query: 602 LIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRS 661
+IH F+ S + I PL V++D LIW +G YS++S +RI D R
Sbjct: 218 VIHCYFDNSTAQQILKTPLFRQVEEDQLIWKAEKNGHYSVRSAYRICMEEIGDNSYLHRP 277
Query: 662 SFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYY-GTTETLVRALVE 720
FW +W +K PKV++ +WR C L +A L + + C G E + L +
Sbjct: 278 GFWNGIWKLKASPKVKNLIWRICLGCLPTRAKLLDKRVNCTSMCSMCDGNYEDDLHVLFD 337
Query: 721 CPRVSFCWQ----LFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNEL 776
C R W+ I + + +T ++ L + + + FV +WS+W S N
Sbjct: 338 CQRARSIWRDSHLSNDIYVAMQTNNTAADIVSALLQNLPHTKIQLFVTLVWSLWKSRNIQ 397
Query: 777 KWNQVEEGPYQVVTRAKSMLTSWKKAQ-------RKSPGSGTGTGDP-AGS--------- 819
W + E +V RA +L WK A R G+ T T + +GS
Sbjct: 398 VWQNMPESSQSIVERAHQLLHGWKAANNCRNRFDRSVIGAETHTVNTMSGSSCTQVQQDQ 457
Query: 820 -QWFSPPVGTFKINFDATL---LSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAE 875
+ P G FK N DA+ L+ VG+G I + FV A T S P
Sbjct: 458 FRCQKPTRGRFKCNVDASFSVHLNVVGYGMC---IRDDRGNFVKARTM----WSRPVFVG 510
Query: 876 AQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISEC-KLLLVQLPN 934
+ T D SEFGV+I +C K N
Sbjct: 511 YRLFNT-----------------------------GNDDISEFGVIIDDCRKWCNSYFEN 541
Query: 935 VTLAWIRRQANDIAYVLAK 953
+ + RRQAN++A+ LA+
Sbjct: 542 SKVEFCRRQANEVAHNLAR 560
>IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
3397609-3394716 E EGN_Mt090430 20090702
Length = 703
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 217/447 (48%), Gaps = 41/447 (9%)
Query: 249 VNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSN 308
+NG P+RG+RQG PLSPYLFILCA+ LS L +K + +L G ++ AP LS+
Sbjct: 288 INGVPTPVFKPKRGIRQGDPLSPYLFILCADVLSGLITKYHDDNKLHGISIANNAPTLSH 347
Query: 309 LLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSNTSELNKNAVKGI 368
L FAD S+ F A+ ++A + I Y++ SGQ +N KS++ F+SN ++ + +
Sbjct: 348 LTFADDSMVFCRANKSEAQNLMEIFADYQSISGQKINLNKSEMVFNSNLNQTIQTEFQQY 407
Query: 369 FGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQ 428
+ N +YLGLP+ + + + IF+F+ + + LS + + VLI+AV Q
Sbjct: 408 MTIKITNNIDKYLGLPTQVLKNQ--IFNFIME-----------RNLSFSSRGVLIRAVIQ 454
Query: 429 AIPSFCMSSFLISVSILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEXGLGFRHL 483
AIPS+ F WGG ++ W S E L +K G GFR +
Sbjct: 455 AIPSYLSVDF-----------------GWGGSEEKRRIHWKSKEVLFKSKFNGGQGFRTM 497
Query: 484 RSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAI 543
FN AL K+ WR +H +L P + L A GR+PSFVW I A+ I
Sbjct: 498 HHFNEALFAKQAWRLIHQPQTLISKCLKAKYYPHTDLLRARRGRNPSFVWSSIHHAEWVI 557
Query: 544 CSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLI 603
G W+I +G +NVW W+ + N F ++ P IR +L R W+ ++
Sbjct: 558 QKGGCWKIGNGSQVNVWEDNWIPQHNGFKIYTP-GANSSSIRQVKELLVEDPRGWHQSIL 616
Query: 604 HGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVA-----SLYVDIEDA 658
F E I +PL V +D +W ++ G Y++KSG+ + SL +
Sbjct: 617 ENHFLSFESERIQQLPLVQEVLEDSYMWMYSQDGNYTVKSGYNFIKEWHYNSLPGPSNNN 676
Query: 659 WRSSFWKALWSMKIPPKVRHFLWRCCR 685
WKA W++ P+ + L C +
Sbjct: 677 NNQRIWKASWNLDTIPRHKDLLLECSQ 703
>IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 19822787-19820648 H
EGN_Mt090430 20090702
Length = 612
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 222/484 (45%), Gaps = 23/484 (4%)
Query: 488 LALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGF 547
L+ G+ WRF + +L P+ +F+ + +G +PS+VWR I +AK + G
Sbjct: 105 LSKAGREGWRFQTESTNLVCRLFKARYFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGA 164
Query: 548 RWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLF 607
RWRI G +I PWL + PI +++ D I + W PLIH LF
Sbjct: 165 RWRIGSGVNIPFLGAPWLKDGLSLSITNPIFEPLMQVKLCDFI-EQDVKMWKAPLIHSLF 223
Query: 608 NPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKAL 667
+ E+I + PL V +D +IW +G YS+KS +RI + D + W +
Sbjct: 224 DAQTAELILNTPLQPLVLEDKMIWKGEKNGTYSLKSAYRICVTEIADNSHMHVNGRWNLI 283
Query: 668 WSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSF 726
W +K+PPK++ FLWR CR +A L G+ C + E + L+ECP+V
Sbjct: 284 WKLKVPPKIKKFLWRVCRGCFPTRARLNSRGVSCPLDCVHCNHNYEDSIHILIECPKVVQ 343
Query: 727 CWQLFGIQLTIG-------NFSTFL-QLLEHLHKVWENAFFENFVMGLWSVWLSSNELKW 778
W+ + TI N S + LL++L + E +WS+W N W
Sbjct: 344 VWRNANLWDTIDRVIHQDYNISALIFTLLQNL----SSGKCELMATIMWSLWKCRNMKLW 399
Query: 779 NQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDP-------AGSQWFSPPVGTFKI 831
Q E QV+ RA +L W+ AQR S T P W P G +K
Sbjct: 400 QQQLETDSQVLQRATHVLEEWQTAQRIRSSSSNQTITPQVRSLRQEEDVWKKPAPGRYKC 459
Query: 832 NFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYS 891
N DA+ +S+ + + + + FV A T EA L T L W LS
Sbjct: 460 NIDASFSTSLNRVGLGMCLRDDDGAFVLARTKWFAHICDIDAGEAVGLHTTLDW-LSNQQ 518
Query: 892 NLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLV-QLPNVTLAWIRRQANDIAYV 950
+ DC +V + +S++D SEFG +I+ CK LLV + N + + RRQAN +A+
Sbjct: 519 FDNVDFVLDCKKVVDCVNSSLEDSSEFGCIITACKQLLVDRFQNSHVEFSRRQANRVAHE 578
Query: 951 LAKS 954
LA++
Sbjct: 579 LAQA 582
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%)
Query: 324 TQALEMKNILVTYEAASGQAVNRQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGL 383
+A MKNIL TYE ASGQA++ KS++FFS+ K + I GV A + G+YLGL
Sbjct: 15 NEAQVMKNILHTYELASGQAISLPKSEVFFSTVVPLPLKETITNILGVRAVMGTGKYLGL 74
Query: 384 PSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKE 420
PS++GR + F F+KD + ++ W+ K LSKAG+E
Sbjct: 75 PSMVGRSKEATFGFIKDRIWHKINSWSSKCLSKAGRE 111
>IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 9482517-9480709 E
EGN_Mt090430 20090702
Length = 602
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 167/583 (28%), Positives = 276/583 (47%), Gaps = 39/583 (6%)
Query: 400 DXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG 459
D +RK + GW +K LS G+ VLI+AVAQAIP + MS +L+ +S+ +++R + ++WWGG
Sbjct: 2 DRIRKKLKGWKEKNLSFEGRGVLIRAVAQAIPVYVMSCYLLPISLCEDIERAVCNFWWGG 61
Query: 460 -----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXX 514
K+ W+S + L K+E G+GF+ LR FNLA+L K+ WR +SL
Sbjct: 62 TEHTRKIHWVSKQILFKQKKEGGMGFKILRDFNLAMLAKQIWRLHIYPDSLLAKCLKAKY 121
Query: 515 XPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVH 574
P+ + L A G +PS+ WR + + + G WRI +G +++ + WL +N +
Sbjct: 122 YPNSDVLKATAGYNPSYAWRSLQKSIWILNKGCCWRIGNGDQVHIQSDNWLPYNNGY--- 178
Query: 575 LPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWT 634
PI + +LT WN L+ F P I +P+ + D+L+W +
Sbjct: 179 KPIYSNPNSPPMVKDLLTEFPFDWNYNLLQQNFLPMDSSQIAQLPIIHPNKPDVLMWMFD 238
Query: 635 DSGIYSMKSGHRIVASLYVDIED-----AWRSSFWKALWSMKIPPKVRHFLWRCCRDILL 689
SG Y++KSG+ + + + + ++ W+ LW++K P+ + LWR + L
Sbjct: 239 LSGSYTVKSGYNAIQNWKATASNDSSASSVNNTLWQKLWNLKTIPRHKSLLWRILNNSLP 298
Query: 690 VKATLARMGLELDTGCDYYG-TTETLVRALVECPRVSFCWQLFGIQLTIGNFSTFLQ--- 745
++ L R G++ C ET+ + C W FG QL+I S Q
Sbjct: 299 LRDNLLRRGIQCSILCPRCNIKEETMTHLFMRCSHSERVW--FGSQLSIQMPSISNQQFS 356
Query: 746 --LLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQ 803
+ E + N + + +S+W + N+ + ++ RA S L+++ KA
Sbjct: 357 DWIAETILNKDSNTVIQVAAI-TYSLWYARNQAVHEDILIPETHIIQRAASSLSAYLKAN 415
Query: 804 RKSPGSG--------TGTGDPAGS--QWFSPPVGTFKINFDATLLSSVGHGAVAAIISNC 853
K +G T G+ A S +W P K+N DA L G + II
Sbjct: 416 AKVSETGSSHSSVVSTNHGNHASSSEKWKRPDHSFVKVNTDAN-LQVQGRWGLGCIIRGE 474
Query: 854 NSGFVSAATSSLQGCSSPAVAEAQALRT--VLSWLLSGYSNLKIQIETDCLQVYCAMRNS 911
+ +AT S G AEA + VL+ + +G+ KI E+DC V +++
Sbjct: 475 DGNVKLSATWSRNGFYCAKTAEAYGIYAGMVLA-VFAGFR--KIIFESDCKNVIEKLKDP 531
Query: 912 V-QDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAYVLAK 953
V +D + G ++ E LL QL + +I RQ N +A+ LA+
Sbjct: 532 VLKDRTYLGAILCEICLLSGQLDDCRFHFIHRQGNHVAHTLAQ 574
>IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35324945-35323011 H EGN_Mt090430 20090702
Length = 613
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/604 (26%), Positives = 270/604 (44%), Gaps = 63/604 (10%)
Query: 376 NYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCM 435
N +YLG+P+ +G + F FL D V + GW +K LS G+ +LI+AVAQAI ++ M
Sbjct: 18 NIQKYLGMPTHLGMSKEQDFQFLMDRVWNKLKGWKEKSLSFEGRGILIRAVAQAISTYIM 77
Query: 436 SSFLISVSILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEXGLGFRHLRSFNLAL 490
S FL+ + ++++ + ++WWG K+ W E L +K E G+GF LR FNLA+
Sbjct: 78 SCFLLPKGLCDKIEKAVCAFWWGSTDNKRKIHWTKKENLFKSKLEGGMGFNILRDFNLAM 137
Query: 491 LGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWR 550
L K+ WRF NSL P N L A +G +PS+ WR I A I G WR
Sbjct: 138 LAKQDWRFHTEPNSLISRCYKAKYYPHCNVLQATIGNNPSYAWRSIFNALWIIKKGSCWR 197
Query: 551 IEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPS 610
I +GQ DLI+ + + WN L++ F
Sbjct: 198 IGNGQE-------------------------------DLIMVNSS-TWNSELLNNQFLGI 225
Query: 611 IVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIV-----ASLYVDIEDAWRSSFWK 665
E I IP+ D L+W + +G Y++KSG+ + S + + WK
Sbjct: 226 DTEAIEQIPIIDIFHRDTLMWMFEKTGSYTVKSGYTAIQIWKNGSQNSPSSSSENTKLWK 285
Query: 666 ALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRV 724
+W++ P+ + LWR + + +++ L + G+ C T ET + CP +
Sbjct: 286 KIWNLHTIPRHKTILWRILNNSIPLRSELGKRGVLCSPLCPRCETKIETTDHIFMHCPNI 345
Query: 725 SFCW-----QLFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWN 779
S W L + L I +F + L+ + + E+ + +++W + N+ +
Sbjct: 346 SKIWFRSNLNLKTLDLPIPSFRDW--LMHSILTLKEDTIIQ-IASITYNIWQARNQSIYE 402
Query: 780 QVEEGPYQVVTRAKSMLTSWKKAQ---------RKSPGSGTGTGDPAGSQWFSPPVGTFK 830
+ + ++ R+ ++ + +AQ S A QW PP+G FK
Sbjct: 403 HMYKPEADIIQRSDRCVSDFLQAQLSDTVDNLNHDISYSNAPHQSVARRQWQPPPLGIFK 462
Query: 831 INFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLS-G 889
N DA L G + AII N ++AAT L+G AEA + +L G
Sbjct: 463 GNSDAN-LQQTGWWGLGAIIINDLGLVMAAATWRLKGSEEVITAEAFTMLQMLRLARDCG 521
Query: 890 YSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAY 949
+ +++ + + + V+ ++ S G+++SE ++L + +I R N +A+
Sbjct: 522 FRHMEFDSDNEKI-VHLVQNEKKENISYLGLILSEIRVLKSCFDTCHIKYISRSCNLVAH 580
Query: 950 VLAK 953
+A+
Sbjct: 581 NIAQ 584
>IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
25061037-25062481 E EGN_Mt090430 20090702
Length = 407
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 198/399 (49%), Gaps = 14/399 (3%)
Query: 351 IFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWN 410
+ FS N S+ K ++ V +YLG+P+ GR + F F+ + + K GW
Sbjct: 1 MVFSPNISQEFKEEIQKHLHVKISDGIQKYLGMPTQFGRSKEQDFHFIMERIWKKHKGWK 60
Query: 411 QKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWG-----GKMRWLS 465
+K LS G+ VLIKAVAQAIP++ MS F++ + ++++ + S+WWG KM W+S
Sbjct: 61 KKCLSFEGRGVLIKAVAQAIPTYYMSCFMLPKGLCTKIEKAICSFWWGTTDKNKKMHWVS 120
Query: 466 WERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGV 525
++L +K GLGF+ LR FNLA+L K+ RF N NSL P + L A V
Sbjct: 121 KKKLFRSKHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFKANYYPHTDILQAKV 180
Query: 526 GRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIR 585
G PS+ W+ I A I G WRI DG SIN+W W+ V P R
Sbjct: 181 GNYPSYAWKSIQNAIWVISKGSCWRIGDGGSINIWEDNWVPTYKGLKVMTTKGPNHFVNR 240
Query: 586 VSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGH 645
V DLI + WN ++ F ++ I+ IPL D L+W +GIYS+KSG+
Sbjct: 241 VKDLI-NNQESLWNKVILEDQFISINIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGY 299
Query: 646 RIVASLYV-DIEDAWRSS----FWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLE 700
+ + I + SS WK +WS+ P+ + LWR D L V+++L + G++
Sbjct: 300 NTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRGIQ 359
Query: 701 LDTGCDY-YGTTETLVRALVECPRVSFCWQLFGIQLTIG 738
C + TET+ + CP W FG L I
Sbjct: 360 CYPLCPRCHSKTETITHLFMSCPLSKRVW--FGSNLCIN 396
>IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233685.2 242381-241350 H EGN_Mt090430
20090702
Length = 268
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 168/278 (60%), Gaps = 32/278 (11%)
Query: 226 LGFXPALGDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLF 285
+G L + +C+ SV Y V VNG+ V PIIP+RGLRQG PLSPYLFI+C EGLS
Sbjct: 4 MGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLSAQL 63
Query: 286 SKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVN 345
K++ + G ++ R A L++LLFAD F +A+ +++++K IL +YEA S QA+N
Sbjct: 64 KKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQAIN 123
Query: 346 RQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKL 405
+K +I FS NTSE +++ K ++Y RY ++R F +L+D V +
Sbjct: 124 FRKPEI-FSKNTSEADRSQSK--------MSY-RY---------KKRENFGYLRDGVWRK 164
Query: 406 VSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGKMR--- 462
+ W K LSKAG+EVLIK V QAIP++CMS+FL+ ++ E+Q ++NS+WWG R
Sbjct: 165 IQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSFWWGLNRRQGK 224
Query: 463 ---WLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWR 497
WLSW++L KE GF L + + G + WR
Sbjct: 225 GIDWLSWDKLTTRKE---YGFSTL----VLVRGDQRWR 255
>IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
3889810-3888042 H EGN_Mt090430 20090702
Length = 489
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 240/547 (43%), Gaps = 96/547 (17%)
Query: 422 LIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGK------MRWLSWERLCVAKEE 475
+IK+V QAI S+ MS F + +++ ++R+MNS+WWG + WLSWE+L + K
Sbjct: 1 MIKSVLQAIMSYVMSLFQLPTTLITTIERMMNSFWWGHDRSTHQSINWLSWEKLSMHKSH 60
Query: 476 XGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRG 535
G+GF+ L +FNLA+LGK+ W+FL +TNSL P F+ RG
Sbjct: 61 GGMGFKDLSAFNLAMLGKQGWKFLSDTNSLVT---------------------PRFIVRG 99
Query: 536 ICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGF--EHIRVSDLILTH 593
RW I G S+ + P L N + I GF +V LI H
Sbjct: 100 RA----------RWSISSGVSLPILDAPLL--SNGESIDGSITEGFYVRDFKVQSLISEH 147
Query: 594 GARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYV 653
G R N+PL+ +F+ IV+ I + PL V D LIW +G Y+++S +R+ +
Sbjct: 148 GKRR-NVPLVRQVFSNDIVDAILNTPLYDQVHQDRLIWKAERNGCYTVRSAYRLCVEKLM 206
Query: 654 DIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTTET 713
D+ R W +W +K+PPKV++ L R CR L +A L G+ T C +T
Sbjct: 207 DVSYLHRPGSWNNIWRLKVPPKVKNLLVRMCRGCLPTRARLQDKGVSCPTNCGSCDSTVN 266
Query: 714 LVRALVE--CPRVSFCWQLFGIQLTIGNFS-TFLQLLEHLHKVWENAFFENFVMGLWSVW 770
+ +++ P + C I +FS ++ HL + W+ A +
Sbjct: 267 SIFHMLQNLPPNIQQC-----IAAICWSFSEQVVERARHLIEDWQEANLPS--------- 312
Query: 771 LSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFK 830
+ P Q T+ ++ T + ++ +G PA QWF P
Sbjct: 313 -----------QTAPLQEATQQQAANTLQHSVRPQNSPTG-----PAVPQWFPP------ 350
Query: 831 INFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLS-G 889
G + + + + FV A AV +A L + +
Sbjct: 351 -----------SRGGIRMCLRDDSGTFVLAKVMPFDQVYPVAVGDALGLYHAIQRMQDMQ 399
Query: 890 YSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECK-LLLVQLPNVTLAWIRRQANDIA 948
+ N+ ++++ ++ A + + D +EFG +I EC+ L N + +IRRQ N A
Sbjct: 400 FDNIDFELDSKIMRD--AFHSRMIDITEFGNIIDECREQFLPSFTNSRVEFIRRQTNMAA 457
Query: 949 YVLAKSV 955
+ LA+ V
Sbjct: 458 HALAREV 464
>IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
4206337-4207793 E EGN_Mt090430 20090702
Length = 357
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 154/281 (54%), Gaps = 5/281 (1%)
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
G ++R AP +S+L FAD ++ F A+ ++A +K I Y+ GQ +N KS++ FS
Sbjct: 32 GISIARNAPAISHLFFADDNMIFCRANKSEAKHLKEIFDEYKRVLGQKINLNKSEMVFSP 91
Query: 356 NTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLS 415
N + K + + + +YLGLP+ +GR + H F+F+ + VR + GW ++ LS
Sbjct: 92 NIIQSVKKEFQDFMPIQITDSITKYLGLPTQVGRSKTHTFNFIMERVRAKLKGWKERNLS 151
Query: 416 KAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG-----KMRWLSWERLC 470
+G+ VLI+AV QA+P++ MS FLI I ++++ + +WWGG ++ W + + L
Sbjct: 152 FSGRGVLIRAVIQALPTYVMSMFLIPEGICDKIEQAICRFWWGGNEDRRRIHWKNKDFLF 211
Query: 471 VAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPS 530
K G GFR +RSFN ALL K+ WR + S P+ + L A +G PS
Sbjct: 212 KPKFSGGQGFRTMRSFNEALLAKQVWRLIKYPTSFLATCLKAKHFPNTDVLKAKLGNQPS 271
Query: 531 FVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEF 571
FVW I K I G RW I DG+ I+VW WL N F
Sbjct: 272 FVWSSIYHTKWIIKKGGRWLIGDGKKIDVWDDNWLPHQNGF 312
>IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233572.2 97249-98280 H EGN_Mt090430
20090702
Length = 258
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 156/266 (58%), Gaps = 42/266 (15%)
Query: 238 LCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGC 297
+C+ SV Y V VNG+ V PIIP+RGLRQG PLSPYLFI+C EGLS K++ + G
Sbjct: 16 MCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLSAQLKKAEARVDIHGV 75
Query: 298 RVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSNT 357
++ R A L++LLFAD F +A+ +++++K IL +YEA S QA+N +K +I FS NT
Sbjct: 76 KLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQAINFRKPEI-FSKNT 134
Query: 358 SELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKA 417
SE +++ + F +L+D V + + W K LSKA
Sbjct: 135 SEADRS----------------------------QENFGYLRDGVWRKIQQWFGKHLSKA 166
Query: 418 GKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGKMR------WLSWERLCV 471
G+EVLIK V QAIP++CMS+FL+ ++ E+Q ++NS+WWG R WLSW++L
Sbjct: 167 GREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSFWWGLNRRQGKGIDWLSWDKLTT 226
Query: 472 AKEEXGLGFRHLRSFNLALLGKRYWR 497
KE GF L + + G + WR
Sbjct: 227 RKE---YGFSTL----VLVRGDQRWR 245
>IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
7642559-7645649 E EGN_Mt090430 20090702
Length = 541
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 175/344 (50%), Gaps = 11/344 (3%)
Query: 383 LPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISV 442
+P+ GR + F F+ D + K + GW +K LS G+ LI+A+AQAIP++ MS FL+
Sbjct: 1 MPTQFGRSKEQDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAIAQAIPTYVMSCFLLPK 60
Query: 443 SILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWR 497
+ ++++ + ++WWGG K+ W E L + + G+GF+ LR FN+A+L K+ WR
Sbjct: 61 GLCEKIEKAVCAFWWGGSDSKRKIHWTKKENLFKPRHKGGMGFKILRDFNMAMLAKQVWR 120
Query: 498 FLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSI 557
F N SL P ++ L +G + S+ WR I + I G W+I +GQ +
Sbjct: 121 FQTNQKSLISRVFKAKYFPYQDILQTNLGYNLSYAWRSIFHSIWVIQKGSCWKIGNGQKV 180
Query: 558 NVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITS 617
+W W+ + P + + + V DLI T +WN +++ F + I
Sbjct: 181 RIWEDNWIPTHQNLRIFTPNMGNPDVVLVKDLINT-DEPSWNNSILNTHFLSIDKDQIEC 239
Query: 618 IPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDI-----EDAWRSSFWKALWSMKI 672
IPL DD +IWH+ G Y+++SG++ + + + ++ WK LW++
Sbjct: 240 IPLINLANDDEIIWHFNQDGNYTVRSGYQAIQNWKITTISEPSNSNIETNLWKKLWTIHT 299
Query: 673 PPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTTETLVR 716
P+ + LWR + L +++ L + G+ + C Y + ++R
Sbjct: 300 IPRHKMILWRVLNNTLPLRSELGKRGILCNPLCPRYLLEDEIIR 343
>IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
29296065-29298854 H EGN_Mt090430 20090702
Length = 693
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 153/269 (56%), Gaps = 28/269 (10%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
IM+CV SV Y V VN + VGPI P GLRQG PLSPYLFILCAEGLS L +++ G +
Sbjct: 170 IMMCVESVDYSVIVNNESVGPIFPGEGLRQGDPLSPYLFILCAEGLSALIHQAERRGDIH 229
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
G + +P +S+LLFA+ FF A + MKNIL TYE A +
Sbjct: 230 GISICTNSPIISHLLFANDCFLFFMAEEREVGVMKNILETYEKA-----------LLVKQ 278
Query: 356 NTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLS 415
K + G+F + + L LPSL+ + D + ++ W+ K LS
Sbjct: 279 LAFRNMKFIIVGVFPTLL-----KTLSLPSLVSA-----LLWELDRIWHKINCWSSKCLS 328
Query: 416 KAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWG------GKMRWLSWERL 469
KA +EVL+K+V Q+IPS+ MS +L+ ++ +++++N++WWG + WLSW+RL
Sbjct: 329 KAEREVLMKSVLQSIPSYIMSVYLLPNKLVDAIEKIINAFWWGHGGTTRKGLHWLSWKRL 388
Query: 470 CVAKEEXGLGFRHLRSFNLALLGKRYWRF 498
V K G+GF+ L SF++A+LG R WR
Sbjct: 389 SVHKNYGGMGFKDLTSFHVAMLGVR-WRI 416
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 70/185 (37%), Gaps = 38/185 (20%)
Query: 546 GFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHG 605
G RWRI G SI ++ WL P+ H++V D+I
Sbjct: 411 GVRWRIGYGASIPLFGASWLKDGCSLSTQSPLYASLAHVKVQDII--------------- 455
Query: 606 LFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWK 665
PS T + + G YS++S +RI + D W
Sbjct: 456 --EPS-----------TKAEKN---------GSYSVRSAYRIYVTKIADNSHLHVPGKWS 493
Query: 666 ALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRV 724
++W +K PPK+R+F+W CR +A L+ G+ GT E + L+E P
Sbjct: 494 SIWKLKFPPKIRNFVWPVCRGCFPTRARLSSRGIHCPNDFVLCGTNYEDSIHVLLEYPGA 553
Query: 725 SFCWQ 729
W+
Sbjct: 554 MQVWR 558
>IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr01_pseudomolecule_IMGAG_V3 1684225-1680716 E
EGN_Mt090430 20090702
Length = 659
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 157/316 (49%), Gaps = 1/316 (0%)
Query: 237 MLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKG 296
M C+ S + NG+++ P+RGLRQG PLSPYLF+LC E LS + +
Sbjct: 1 MSCITSSSLSLKWNGEKLDSFKPKRGLRQGDPLSPYLFVLCMEKLSLMIQNQVTNNTWRP 60
Query: 297 CRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSN 356
++SR P S+LLFAD L F EA +Q ++N+L + ASG +N QK SSN
Sbjct: 61 IKISRHGPSFSHLLFADDCLLFTEAKSSQVKVVRNVLQKFCFASGLKINIQKLKFMSSSN 120
Query: 357 TSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSK 416
S ++ + + + G+YLG P L GR + F+F+ D + ++GW LLS+
Sbjct: 121 VSRHKQHKFESLLQFNHTSHLGKYLGFPMLSGRIKNSDFNFILDKINGRLAGWKMNLLSR 180
Query: 417 AGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGKM-RWLSWERLCVAKEE 475
G+ L K+V A+P + M + + I + + S+ WG W++W+ L + K
Sbjct: 181 PGRITLAKSVVTAMPIYTMQNLWLPSGICENIDATVRSFIWGKNYCHWVNWKNLTMPKSC 240
Query: 476 XGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRG 535
GLG R R+ N++LLGK W LH L + + + S +WR
Sbjct: 241 GGLGIRTARNSNISLLGKHIWDILHQPEKLWVQMLRHKYLSNTHIMHTPFKLGDSCIWRA 300
Query: 536 ICAAKDAICSGFRWRI 551
I A + + GF R+
Sbjct: 301 IVKAVEILGPGFVCRV 316
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 115/293 (39%), Gaps = 12/293 (4%)
Query: 664 WKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGT-TETLVRALVECP 722
W +W +++ +RHF W L + A L DT C G E+ + L +CP
Sbjct: 340 WSWIWRLQVSENLRHFCWLVMHASLPINAFRGSRHLTSDTSCQRCGAFVESDIHTLRDCP 399
Query: 723 RVSFCWQLFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVE 782
W+ + QL H V E F++ + +W + NE + V
Sbjct: 400 MAKKIWRHLSPTYPNDFYMQDCQLWFKRHAVRETG--TRFIVACYEIWRNRNEEIFQNVR 457
Query: 783 EGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATLLSSVG 842
+ ++ V + S+ + + G +W PP KIN D + + G
Sbjct: 458 KATWESVNN----IISYHSSMVHALGPTNKCHVIRQVRWNPPPEDFIKINVDGSSFGNPG 513
Query: 843 HGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQAL--RTVLSWLLSGYSNLKIQIETD 900
+ ++ N N G + S G ++ AE A+ L+W L GY ++ ++ ++
Sbjct: 514 NAGFGGLLRN-NRGNWTHGFSGSCGRATNLFAELSAIWKGLQLAWDL-GYRSIIMESDSQ 571
Query: 901 CLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAYVLAK 953
+ + + +D+ ++S + L V+ + R+ N+ A LAK
Sbjct: 572 -VALDLILDTKQKDFHPHASLLSFIRKLSSLPWVVSFSHTLREGNECADWLAK 623
>IMGA|AC225611_8.1 contains similarity to reverse trancriptase,
related, putative AC225611.10 67770-68780 H EGN_Mt090430
20090702
Length = 336
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 166/324 (51%), Gaps = 11/324 (3%)
Query: 383 LPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISV 442
+P+ GR + F+FL D + K + GW +K LS G+ VLI+ VAQAIP++ MS FL+
Sbjct: 1 MPTHFGRSKEQDFNFLMDRIWKKLKGWKEKSLSFEGRGVLIRVVAQAIPTYIMSCFLLPK 60
Query: 443 SILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWR 497
SI ++R + S+WWG K+ W+ + L K + G+GFR+LR FNLA+L K+ WR
Sbjct: 61 SICDRIERAICSFWWGSNETKRKIHWIKKDHLFKFKHDGGMGFRNLRDFNLAMLAKQVWR 120
Query: 498 FLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSI 557
SL P+ + L G +PS+ WR I + I G RI +G +
Sbjct: 121 LHTQPQSLIARCYKARYYPNSDVLQVSQGYNPSYAWRSISQSIWIINKGSCKRIGNGYNT 180
Query: 558 NVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITS 617
+W W+ + F V P L V DLI +G WN ++ F P ++I
Sbjct: 181 KIWEDNWIPYHSNFKVLSPKLDTTNINLVKDLIQDNGT-EWNTDILQANFIPYEQDLIKQ 239
Query: 618 IPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSS-----FWKALWSMKI 672
IPL + D L+W G+Y++KSG++ + S + +D +S WK LW+++
Sbjct: 240 IPLINHNNSDELMWMKDTDGLYTVKSGYQAIQSWKQNDQDRPTTSNTSPKIWKKLWALQT 299
Query: 673 PPKVRHFLWRCCRDILLVKATLAR 696
P+ + +WR + L + + + +
Sbjct: 300 IPRHKMLMWRIINNALPINSKMDK 323
>IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
12119249-12120974 H EGN_Mt090430 20090702
Length = 477
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 196/445 (44%), Gaps = 47/445 (10%)
Query: 259 PERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFF 318
P LRQG PLSPYLF++C E LS + ++ + R K +SR P LS+L FAD L F
Sbjct: 17 PIGRLRQGDPLSPYLFVMCMENLSHMILEAVDDSRWKPVTLSRNGPPLSHLFFADDVLLF 76
Query: 319 FEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYG 378
+A+ +Q M+++ + SG VN KS FFS+ + N + + G+ +
Sbjct: 77 SKATVSQVRVMEDVFTKFAGTSGLKVNTSKSRAFFSNVVTHSKINTMVSVTGIHNTSSLD 136
Query: 379 RYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSF 438
+YLG P GR +R + FL D V+ ++ W KLL+KAG+ L K+V AIP++ M
Sbjct: 137 KYLGFPIFHGRMKRVDYDFLIDKVQSCLASWKNKLLNKAGRLTLAKSVLNAIPTYYMQIS 196
Query: 439 LISVSILVELQRLMNSYWWGGK----MRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKR 494
SI +L ++ + W G + +SW+++ K GLG R R+ N ALLGK
Sbjct: 197 WTPQSICNQLDKMTRKFIWKGTDGKGVHLVSWDKITRPKSLGGLGVRVARNANTALLGKL 256
Query: 495 YWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDG 554
W N N + N L ++ S W + A+ + G +R+ +G
Sbjct: 257 VWDIHTNANKSWVQILSNKYLGNYNVLDVP-KKNGSTTWNSMLKARSVLRDGLVFRVGNG 315
Query: 555 QS---INVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSI 611
+ + WT WV + + + + DLI+
Sbjct: 316 TTSFWYSSWTTLGTFASMVLWVDIHYIS----LCIRDLII-------------------- 351
Query: 612 VEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMK 671
DD + W GIY+++SG+ + + + + S W +W MK
Sbjct: 352 --------------DDHITWANHLDGIYTVRSGYFWLLTTHSEDHHDEDVS-WNWIWKMK 396
Query: 672 IPPKVRHFLWRCCRDILLVKATLAR 696
P K++ W L KA L R
Sbjct: 397 APEKIKFLFWTASHVSLPTKALLHR 421
>IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
23554745-23554236 H EGN_Mt090430 20090702
Length = 169
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 107/153 (69%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
+ +C+ SV Y V VNG+ VGPI P+RGLRQG PLSPYLFILCAEGLS L +++ G +
Sbjct: 1 MTMCIESVNYQVLVNGESVGPINPKRGLRQGDPLSPYLFILCAEGLSALLRRAETRGDIH 60
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
G +V R AP L++LLFA F +S + ++K +L YE+ +GQA++ +KS+IFF
Sbjct: 61 GVKVCRGAPLLTHLLFAYDCFLFCRSSIMKCTKIKEVLHVYESVTGQAIHFEKSEIFFGK 120
Query: 356 NTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIG 388
NTS+ ++ A+K + V A + G+YLG+PS++G
Sbjct: 121 NTSQADRKAIKNLLQVSANMGNGKYLGMPSMVG 153
>IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse
transcriptase); Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
15868030-15871357 E EGN_Mt090430 20090702
Length = 845
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 111/195 (56%), Gaps = 12/195 (6%)
Query: 226 LGFXPALGDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLF 285
+GF IM+CV +V Y V VN + G PLSPYLFILC EGLS L
Sbjct: 283 MGFDSKWVQQIMMCVETVDYSVIVNNE------------LGDPLSPYLFILCDEGLSALI 330
Query: 286 SKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVN 345
K++ G L G + AP +S+LLFAD FF+ +A MKNIL TYE ASGQ ++
Sbjct: 331 RKAERSGDLHGVSICTNAPTISHLLFADDCFLFFKVDDNEAQVMKNILHTYELASGQTIS 390
Query: 346 RQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKL 405
K ++FFS+ K + I GV A + G+YLGLPS++GR + F F+KD +
Sbjct: 391 LPKYEVFFSTVVPLPLKETITNILGVRAVMGTGKYLGLPSMVGRSKEATFGFIKDRIWHK 450
Query: 406 VSGWNQKLLSKAGKE 420
++ W+ K LSK G+E
Sbjct: 451 INSWSSKCLSKVGRE 465
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 766 LWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDP-------AG 818
+WS+W N W Q E QV+ RA +L W+ AQR S T P
Sbjct: 616 MWSLWKCRNMKLWQQQLETNLQVLQRATHVLEEWQTAQRIRSSSSNQTITPQVRSLRQEE 675
Query: 819 SQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQA 878
W P G +K N DA+ +S+ + + + + FV A T V EA
Sbjct: 676 DVWKKPAPGRYKCNIDASFSTSLNKVGLGMCLRDDDGAFVLARTEWFAPICDIDVGEAVG 735
Query: 879 LRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLV-QLPNVTL 937
L T L W LS + DC +V + +S++D SEFG +I+ CK LLV + N +
Sbjct: 736 LHTALDW-LSNQQFDNVDFVLDCKKVVDCVNSSLEDSSEFGCIITTCKQLLVDRFQNSHV 794
Query: 938 AWIRRQANDIAYVLAKSV 955
+ RRQAN +A+ LA++V
Sbjct: 795 EFSRRQANRVAHELAQAV 812
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 488 LALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGF 547
L+ +G+ WRF +++L P+ +F+ + +G +PS+VWR I +AK + G
Sbjct: 459 LSKVGREGWRFQTESSNLVCRLFKARYFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGA 518
Query: 548 RWRIEDGQSINVWTKPWLLRDNEFWVHL-PILPGFEHIRVSDLILTHGARAWNLPLIHGL 606
RWRI G +I PW L+D F PI +++ D I + W PLIH L
Sbjct: 519 RWRIGSGVNIPFLGAPW-LKDGLFLSTTNPIFEPLMQVKLCDFI-EQDVKMWKAPLIHSL 576
Query: 607 FNPSIVEIITSIPLATNVQDDILIWHWTDSG 637
F+ E+I + PL V +D +IW SG
Sbjct: 577 FDAQTAELILNTPLQPLVLEDKMIWKGEKSG 607
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 2 LKDANGEWISDNNXLKGMVSDYFXNLFEXGDVDLSPVVGLFSPLVSDNDNSMLLGDLSVD 61
L + G I+D + + +YF LF + +PVV + +VS +DN ML +
Sbjct: 104 LDNDEGVRIADEQGMSQVAKEYFETLFLESNSTRAPVVNIIEKVVSGDDNIMLTAPFQAE 163
Query: 62 EVKLAVNQMHADKSPGMDGLNPRFY 86
E K A+ MH DK PG DG NP F+
Sbjct: 164 EFKDAMFSMHPDKCPGPDGFNPGFF 188
>IMGA|Medtr8g037100.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 7957038-7958530 H
EGN_Mt090430 20090702
Length = 410
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 1/218 (0%)
Query: 488 LALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGF 547
+A+LGK+ WR L ++L P NFL A +G +PSFVWR I +K + +G
Sbjct: 1 MAMLGKQGWRILTKPDTLIARIYKARYFPRCNFLEAELGHNPSFVWRSIYKSKFILRAGS 60
Query: 548 RWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLF 607
RW+I DG SI+VW W+ + + + ++RVSD +L + ++W++P +H +F
Sbjct: 61 RWKIGDGMSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPN-QKSWDVPFLHSIF 119
Query: 608 NPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKAL 667
+ IVE I + PL ++V++D LIW ++ YS++S +R+ + +D W +
Sbjct: 120 SEQIVEHIVATPLYSSVREDQLIWKKENNEEYSVRSAYRLCLNELLDTSHFKVEGAWDLV 179
Query: 668 WSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGC 705
W +K+PP+V++ +WR CR+ L + L G+ T C
Sbjct: 180 WKLKVPPRVKNLIWRICRNFLPTRKRLRDKGVNCTTVC 217
>IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
12035165-12036141 H EGN_Mt090430 20090702
Length = 250
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 1/214 (0%)
Query: 473 KEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFV 532
KE G+GFRH FNLA+LGK+ W+ L N +++ P+ FL A +G + S++
Sbjct: 3 KEYGGMGFRHFFGFNLAMLGKQGWKLLTNQDTIVARIYKAKYYPNTYFLGARLGHNQSYI 62
Query: 533 WRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILT 592
WR I A + + G RWRI +G++I VWT PWL D V + G E+++V+DL+ +
Sbjct: 63 WRSIFALQVLVRGGQRWRIGNGKNIAVWTDPWLREDKNSVVSSTRVQGTENLKVADLMDS 122
Query: 593 HGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLY 652
+G WN LI LFN I + L +D IW + G Y++KS +R
Sbjct: 123 NGV-TWNWGLIAALFNEQDKAAIAKLALTNREGEDKRIWKFNSQGFYTVKSAYRYAMETL 181
Query: 653 VDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRD 686
+D E+ W + M+IP +++ FLWR RD
Sbjct: 182 IDNEEYRVPREWLKMLKMQIPQRIKVFLWRVLRD 215
>IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
5513052-5515983 E EGN_Mt090430 20090702
Length = 591
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 177/412 (42%), Gaps = 83/412 (20%)
Query: 400 DXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG 459
D + K ++ W + LSKAGKEV+IK+V Q+IPS+ MS +L+ S++ ++++++N++WWGG
Sbjct: 251 DRIWKRINAWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLMPSSVIDDIEKMINAFWWGG 310
Query: 460 K-----MRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXX 514
+ ++W++WER+ KE G+GF + ++FN+A++ K+ W FL SL
Sbjct: 311 RSNNRGIKWMAWERMACPKEFGGMGFMNFKAFNIAMVAKQGWSFLSKLESLVARVFEARY 370
Query: 515 XPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVH 574
P +FL A +G + SF WR I ++ + G RW + +GQ ++V PW
Sbjct: 371 FPRSSFLGAKLGNNLSFAWRSIWNSRQILLHGCRWTVGNGQQVSVMNDPW---------- 420
Query: 575 LPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWT 634
+ G+ +V++I PL VQ+D + W
Sbjct: 421 ----------------------------VRGV-QDDMVQVILDTPLFAEVQNDRITWMME 451
Query: 635 DSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRC-CRDI--LLVK 691
+ Y +K+ +++ + LWR C+D L +K
Sbjct: 452 RNRRYIVKTDYKLA---------------------------MMELLWRIYCQDCYKLAIK 484
Query: 692 ATLARMGLELDTGCDYYGTTETLVRALVECPRVSFCWQLFGI----QLTIGNFSTFLQLL 747
R+ + CD E A V C W G+ Q +G S+ +
Sbjct: 485 GAWQRIWKVICPWCD--TIVEDDWNAFVGCTVARESWYWAGLSTVRQPRVGTVSSLADFI 542
Query: 748 EHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSW 799
+ + + LW +W + N+ WN + ++ L +W
Sbjct: 543 FDICRSESRDIVGRVALLLWQIWAACNDTIWNYAHHTSLSI---GRTTLDAW 591
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 266 GCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQ 325
G PLSPYLFIL EGLS L K+ + G + G +V R AP +S+LLFAD F A+
Sbjct: 193 GDPLSPYLFILVDEGLSTLIHKAVNRGDIHGIQVCRGAPVVSHLLFADDYFLFCRAN--- 249
Query: 326 ALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
+ I A G+A+++ ++ S
Sbjct: 250 ---VDRIWKRINAWRGRALSKAGKEVMIKS 276
>IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6753317-6752601 H EGN_Mt090430 20090702
Length = 238
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 16/237 (6%)
Query: 386 LIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSIL 445
+IGR ++ +F F+KD V + ++ W + LSKAGKEV+IK+ Q+IP++ MS FLI S+
Sbjct: 1 MIGRSKKDMFKFIKDQVWRKINSWGGRSLSKAGKEVMIKSALQSIPTYFMSIFLIPSSLG 60
Query: 446 VELQRLMNSYWWGG------KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFL 499
E++++MNS+WWG +RWLSW +L V K G+GF++L FN+ALLGK+ WR +
Sbjct: 61 DEIEKMMNSFWWGNGGNRNKGIRWLSWYKLYVHKRSGGMGFKNLYMFNMALLGKQVWRLM 120
Query: 500 HNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINV 559
L + A G + S+VW+ I A + G RW+I I V
Sbjct: 121 CQPELLIARLFKARYYQRNDIFEAKKGNNSSYVWKSIHEAIPMVKQGTRWKIGKKDKIRV 180
Query: 560 WTKPWLLRDNEFWVHLPILPGFEHIRVSDL----ILTHGARAWNLPLIHGLFNPSIV 612
+ WL+ P ++ ++ L +L G ++W+L ++ P V
Sbjct: 181 FQDRWLMNGG------LAQPAAQYNQLLQLNVKELLQPGQKSWDLDVLQHYLTPHSV 231
>IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
34193929-34195112 H EGN_Mt090430 20090702
Length = 373
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 100/166 (60%), Gaps = 22/166 (13%)
Query: 236 IMLCVASVKYWVGVNGDEVGP-IIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRL 294
IM+C+ +V Y V VN VGP IIP RGL+QG PLSPYLFILC EGLS L +++ G L
Sbjct: 221 IMMCIETVDYSVLVNQKLVGPPIIPGRGLQQGDPLSPYLFILCVEGLSALIRQAEARGEL 280
Query: 295 KGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFS 354
G +VS + T+A MK IL YE ASGQA++ KS+I++S
Sbjct: 281 HGAKVS---------------------TETEAHTMKTILAIYEVASGQAISLPKSEIYYS 319
Query: 355 SNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKD 400
NT +N + I GV A L +YLGLPS+IGR ++ F+F+KD
Sbjct: 320 RNTGADVQNNITSILGVQAVLGTSKYLGLPSMIGRSKKSTFNFIKD 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 23 YFXNLFEXGDVDLSPVVGLFSPLVSDNDNSMLLGDLSVDEVKLAVNQMHADKSPGMDGLN 82
YF LF PV+ + + ++S+ DN L ++E K A+ M A+K PG DG N
Sbjct: 8 YFDELFRAKQSTRDPVINVINKVISEEDNHQLTTPFLIEEFKEAMFSMQAEKCPGPDGFN 67
Query: 83 PRFYXRF 89
P FY F
Sbjct: 68 PGFYQHF 74
>IMGA|Medtr8g105650.1 reverse transcriptase, putative;
100033-105622, related chr08_pseudomolecule_IMGAG_V3
23385469-23384651 H EGN_Mt090430 20090702
Length = 244
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 34/273 (12%)
Query: 383 LPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISV 442
+P+ GR + H F F+ D + K + GW +K LS G+ LI+AVAQAIP++ MS FL+
Sbjct: 1 MPTHFGRSKEHDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAVAQAIPTYVMSCFLLPK 60
Query: 443 SILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWR 497
+ ++++++ ++WWGG K+ W E L + + G+GF+ LR FN+A+L K+
Sbjct: 61 GLCEKIEKVVCAFWWGGTDSKKKIHWTKRENLFKPRHKGGMGFKILRDFNMAMLAKQ--- 117
Query: 498 FLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSI 557
A +G PS+ WR I + I G W+I +GQ +
Sbjct: 118 -------------------------ANLGYSPSYAWRSIFHSIWVIQKGSCWKIGNGQKV 152
Query: 558 NVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITS 617
+W W+ + F + P L + + V DL +WN +++ F + I
Sbjct: 153 RIWEDNWIPTHHNFRIFTPNLGNPDVVLVKDLT-NMDEPSWNNSILNTHFLSIDKDQIEC 211
Query: 618 IPLATNVQDDILIWHWTDSGIYSMKSGHRIVAS 650
IPL DD ++WH+ G Y++ SG++ + +
Sbjct: 212 IPLINLANDDEIMWHFNQDGKYTVHSGYQAIQN 244
>IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
11971058-11973594 E EGN_Mt090430 20090702
Length = 628
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 126/227 (55%), Gaps = 3/227 (1%)
Query: 234 DLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGR 293
++IM V +V+ V NG+ P++GLRQG P+SPYLF++C + LS L S++ +G
Sbjct: 395 NVIMHSVTTVRTNVRWNGNRADFFTPKKGLRQGDPISPYLFVICMDKLSHLISEAIDKGD 454
Query: 294 LKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFF 353
+ R P +S+L+FAD L F +A+ +Q + +L + GQ+++ QK+ IFF
Sbjct: 455 WLDLKTGRTGPMISHLMFADDLLLFGQATDSQMRGVMEVLNKFCHLLGQSISIQKTTIFF 514
Query: 354 SSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKL 413
SSN + + + I G G+YLG+P RR F +L + VR ++ W
Sbjct: 515 SSNVYRVTRRLLVDISGFRETTELGKYLGVPLTGKAPRRKDFQYLVNEVRNKLTAWKSNQ 574
Query: 414 LSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGK 460
S AG+ L K+V +AIP M + ++ + + E+Q++ ++ WG K
Sbjct: 575 FSFAGRVTLAKSVIEAIP---MMNSVVPKAYVQEIQKVQRAFIWGDK 618
>IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26300425-26300964 H EGN_Mt090430 20090702
Length = 179
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 103/174 (59%), Gaps = 5/174 (2%)
Query: 422 LIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGK-----MRWLSWERLCVAKEEX 476
+IK V Q+IPS+ MS +L+ S++ ++++++N++WWGG+ ++W++WER+ KE
Sbjct: 1 MIKYVLQSIPSYIMSIYLLPNSVIDDIEKMINAFWWGGRSNNRGIKWMAWERVACPKEFG 60
Query: 477 GLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGI 536
G+ FR+ ++FN+A++ K+ W FL +SL P +FL A +G +PSF WR I
Sbjct: 61 GMRFRNFKAFNIAMVAKQGWSFLSKPDSLVARIFKSRYFPRSSFLGAKLGNNPSFAWRSI 120
Query: 537 CAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLI 590
+ + G RW I DGQ ++V PW+ + W+ P + VSDLI
Sbjct: 121 WNSCQLLLYGCRWTIGDGQQVSVMNDPWVRGVHGSWIQSPQGQDVHSLPVSDLI 174
>IMGA|Medtr1g117580.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 25273871-25275952 H
EGN_Mt090430 20090702
Length = 663
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Query: 478 LGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGIC 537
+ F+ L +FNLA+LGK+ WR L N ++L NFL A +G PSFVWR IC
Sbjct: 479 MSFKSLGTFNLAMLGKQGWRILTNPDTLIAKIYKARYFSRCNFLEATIGHKPSFVWRSIC 538
Query: 538 AAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARA 597
+K + +G RW+I +G SI VW W+ + + + ++RVSD IL + ++
Sbjct: 539 NSKFILKAGSRWKIGNGTSIPVWNNYWMKDNVTLYPLEDVASTLANLRVSDCILPN-HKS 597
Query: 598 WNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVD 654
WNLP +H +FN +VE I + PL +V +D LIW ++G YS++S + + + +D
Sbjct: 598 WNLPFLHSVFNHQVVEHIINTPLFPSVHEDRLIWKKENNGEYSVRSAYHLCMNELLD 654
>IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873812-31875697 H EGN_Mt090430 20090702
Length = 485
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 198/493 (40%), Gaps = 96/493 (19%)
Query: 358 SELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKA 417
S + + + I GV L G+YLGL S+IGR + F+++KD + + ++ W + LSKA
Sbjct: 2 SHVAQEDLARILGVRLVLGTGKYLGLTSMIGRSKTTTFAYIKDRIWQKINSWRGRALSKA 61
Query: 418 GKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGKMRWLSWERLCVAKEEXG 477
GKEV+IK V Q+IPS+ MS +++ +++ +++ ++NS+
Sbjct: 62 GKEVMIKFVLQSIPSYIMSIYVLPRTVINDIEMMLNSF---------------------- 99
Query: 478 LGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGIC 537
+ G W FL N SL P +FL A G +PS+ WR I
Sbjct: 100 --------WWGGGGGNGGWNFLTNPPSLISQIFKARYFPITSFLDAKFGFNPSYAWRIIW 151
Query: 538 AAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARA 597
++ + G RW I DG I V PWL S L+ T +
Sbjct: 152 MSRQILSRGCRWSIGDGSHIRVMGDPWLCSG------------------SQLLKT---KE 190
Query: 598 WNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIED 657
W +I PS VQ+D ++W +G+YS++SG+ IV + +
Sbjct: 191 WAHVVIQTSLFPS-------------VQEDKVVWQEESNGLYSVRSGYHIV------VRE 231
Query: 658 AWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTTETLVRA 717
S+ ++ ++ RH C +I L CDY ET A
Sbjct: 232 VVPSTHYRGCIPTRVNLNQRHV---SCTNICL--------------WCDY--EEETYWHA 272
Query: 718 LVECPRVSFCWQLFGIQLT----IGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSS 773
VEC W G+ + + F + +L+ ++ + LW +W +
Sbjct: 273 FVECEVARESWFSTGLSVVLLPRVNLFQSLSELIFYICCTESADAGGCIAVMLWQLWAAH 332
Query: 774 NELKWNQVEEGPYQVVTRAKSMLTSWKKAQR-KSPGSGTGTGDPAGSQWFSPPVGTFKIN 832
N + WN + P ++ A S K AQ S G T P +W K N
Sbjct: 333 NNVVWNSSRDTPLKIGRLALSNWQQRKLAQEVSSSGRHVNTPLPVQVRWEKLTHRWMKCN 392
Query: 833 FDATLLSSVGHGA 845
++ ++ GH
Sbjct: 393 VESVFVA--GHST 403
>IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26368918-26367637 H EGN_Mt090430 20090702
Length = 409
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 153/405 (37%), Gaps = 42/405 (10%)
Query: 545 SGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIH 604
SG RW+I + +I ++ PWL +++RV LI WN +++
Sbjct: 5 SGARWKIGNNINIPMFEAPWLRNGGVISGVGQSSDVLQNVRVHSLI-DQNTNGWNYNMVN 63
Query: 605 GLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFW 664
F+ V+ I P+ V++D LIW +G YS+K R +
Sbjct: 64 YYFDYDTVQEIIRTPIFHQVEEDALIWKAEKNGHYSVK-----------------RQAVG 106
Query: 665 KALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPR 723
A K+P KV +FLWR CRD L +A L G+ C E L +CP+
Sbjct: 107 IAFGDSKVPLKVNNFLWRVCRDCLPTQARLLDKGVNCTYLCGLCEECYEDTTHVLFDCPK 166
Query: 724 VSFCW----QLFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWN 779
W + + + N +T +++ L K FE F M LWS+W S N W
Sbjct: 167 ARNVWLNCSMVDKVSSVMLNHNTAAEIILALLKELTKEKFEQFAMNLWSLWKSRNLRIWQ 226
Query: 780 QVEEGPYQVVTRAKSMLTSWKKAQ-RKSPGSGTG-----TGD------------PAGSQW 821
+ E + RA+ ML W++A RK S G D + +W
Sbjct: 227 NISETCQAISARAQQMLVEWREANMRKQKCSAAGHMVVQQADVNMHYVGASSLLSSHIKW 286
Query: 822 FSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRT 881
P G K N DA + H I + F A P + EA L
Sbjct: 287 TKPQQGKLKCNIDAAFSEDLNHVGFGLCIRDAAGNFRKAKMMWSNPICRPEIGEALGLLY 346
Query: 882 VLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECK 926
+ W+ + E D V + SEFG ++ +CK
Sbjct: 347 AIQWVYE-LQLTNVDFEMDAKLVVDYFNKGSNNVSEFGAILEDCK 390
>IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
12585358-12584747 H EGN_Mt090430 20090702
Length = 203
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
IM+CV + Y V VN + VGPI RGLRQG PLSPYLFILCAEG L K + +
Sbjct: 56 IMMCVETDDYSVIVNNESVGPIFLGRGLRQGDPLSPYLFILCAEGHLALIHKGEWREDMH 115
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
+ AP +S+LLFAD FF + +A MK+IL YEA S QA+N KS+++++
Sbjct: 116 DISICTNAPVISHLLFADDCFLFFWLNEIEAHMMKHILEIYEAVSSQAINLPKSEVYYNH 175
Query: 356 NTSELNKNAVKGIFGVIAPLNYGRYLG 382
N S K+ + V A + G+YL
Sbjct: 176 NVSAPLKDFITTTLDVRAVMGTGKYLN 202
>IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 4275704-4277642 H
EGN_Mt090430 20090702
Length = 171
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 92/152 (60%)
Query: 285 FSKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAV 344
+K+ +G + G + R P +S+LLFAD F A + + +IL YE ASGQ V
Sbjct: 1 MTKAVVKGDIPGIKNFRRGPAVSHLLFADDCFIFCRAKVNEVQHLISILREYEEASGQQV 60
Query: 345 NRQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRK 404
N KS++FF +N S+ K + I GV L G YLGLPS++GR ++ F ++KD + +
Sbjct: 61 NLAKSEVFFGNNMSQAAKQDLANILGVKHALGTGTYLGLPSMVGRSKKATFGYIKDKIWR 120
Query: 405 LVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMS 436
++ W + LSK+GKE +IK+V Q IPS+ MS
Sbjct: 121 KINSWRGRSLSKSGKETMIKSVLQLIPSYIMS 152
>IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
26299553-26300277 H EGN_Mt090430 20090702
Length = 207
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 78/123 (63%)
Query: 249 VNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSN 308
+N D VGPI+P RGLRQ PLSPYLFIL AEGLS L K+ + G + G +V AP +S+
Sbjct: 85 MNFDRVGPIVPGRGLRQADPLSPYLFILVAEGLSTLIHKAVNRGGIHGVQVCCGAPLVSH 144
Query: 309 LLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSNTSELNKNAVKGI 368
LLFAD F A+ +A + IL TYE ASGQ +N KS++FFS N S + + I
Sbjct: 145 LLFADDCFLFCRANVVEAQRLLTILKTYEVASGQEINLSKSEVFFSRNMSGAAQEDLSRI 204
Query: 369 FGV 371
GV
Sbjct: 205 IGV 207
>IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 40910518-40909919 H
EGN_Mt090430 20090702
Length = 199
Score = 119 bits (297), Expect = 1e-26, Method: Composition-based stats.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 5/171 (2%)
Query: 400 DXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG 459
D + K + GW +K LS G+ VLI+AV Q IP++ MS FL+ + +++R++ S+WWG
Sbjct: 2 DRIWKKLKGWKEKSLSFEGRGVLIRAVTQVIPTYYMSCFLLPKGLCEKIERVVCSFWWGS 61
Query: 460 -----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXX 514
K+ W + E L K + G+ F+ LR FN+A+L K+ WRF N N+L
Sbjct: 62 TNTKKKIHWKNKEILFKFKHDGGMVFKSLRDFNIAMLAKQVWRFHTNLNTLIAKCFKSKY 121
Query: 515 XPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWL 565
P + L A +G +P++ WR I A I G WR+ G +I +W W+
Sbjct: 122 YPHTDILEADLGNNPNYAWRSIQNAIWPILKGSCWRVGKGDNIRIWDDNWI 172
>IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 31444078-31442691 H
EGN_Mt090430 20090702
Length = 404
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 172/413 (41%), Gaps = 44/413 (10%)
Query: 546 GFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHG 605
G RW I G I++ +PW+ P ++ V LI + WN PL+
Sbjct: 6 GTRWIIGSGYDISMINEPWIGMGLRVPPAAPDDLSYQGYSVGHLI-HQDVKTWNEPLVIC 64
Query: 606 LFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWK 665
+F + I + PL V +D L+W +G YS++S +R+ D+ + FW
Sbjct: 65 IFEAGTAQQILNTPLFLQVNEDKLVWKPEKNGQYSVRSAYRVCVEEIADMSHLHTNGFWG 124
Query: 666 ALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTTETLVRALVECPRVS 725
+W +K+PPKV++ LWR CR+ L + +G+ TG + E L+ + P +
Sbjct: 125 GIWKLKVPPKVKNMLWRVCRECLPTRV----LGIWRSTG--LWQVIEPLLHRFDDAPDII 178
Query: 726 FCWQLFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGP 785
F G + + ++ +HL + W NA + V ++G
Sbjct: 179 FYLLEHGSAQVTESNGSIIERAKHLLEDWRNANKKQQVQA---------------SQQGN 223
Query: 786 YQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGA 845
VV ML + +P G+ + ++W P G K N A+ SS
Sbjct: 224 TTVV-----MLPN-------TPQVTVGSNEE--TRWKKPMRGRLKCNVVASFSSSTNKVG 269
Query: 846 VAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQ---IETDCL 902
V I + + FV A T S + EA L + W+ L++Q E D
Sbjct: 270 VGMCIRDEDGCFVRAKTMWHTPLCSVDIGEALGLHHTIRWV----HELQLQNVNFEVDSK 325
Query: 903 QVYCAMRNSVQDWSEFGVVI-SECKLLLVQLPNVTLAWIRRQANDIAYVLAKS 954
+V D ++F V++ S + LPN + + RRQAN +A+ LAK+
Sbjct: 326 RVADYFNRGNGDITKFEVIMDSNRHYCSLYLPNSHVEFYRRQANGVAHELAKA 378
>IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 17721962-17723166 E
EGN_Mt090430 20090702
Length = 188
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 23/160 (14%)
Query: 351 IFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWN 410
I FS N +++ ++ + I G+ + +YLG+P+ +G+ +R
Sbjct: 42 IIFSKNVADIEQSNIIQILGMKKVEGFSKYLGVPTHMGKSKR------------------ 83
Query: 411 QKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG-----KMRWLS 465
QK LS AG+ LIKAV+QAIP++ MS FL+ + +L R++ +WWG + W+
Sbjct: 84 QKHLSFAGRSTLIKAVSQAIPTYIMSGFLLPKNFCQQLDRVICDFWWGSNTDSKRTHWIK 143
Query: 466 WERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSL 505
WE+LC AK+ GLGFR+LR+FN+ALL K+ WR SL
Sbjct: 144 WEKLCKAKKNGGLGFRNLRAFNIALLAKQIWRIQTQNQSL 183
>IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
12265782-12266442 H EGN_Mt090430 20090702
Length = 195
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 435 MSSFLISVSILVELQRLMNSYWWGGK------MRWLSWERLCVAKEEXGLGFRHLRSFNL 488
MS F + S+ E++++MNS+WWG + +SW++L + K++ G+ F+ L +FN+
Sbjct: 1 MSLFTLPSSLCDEIEKMMNSFWWGHSGSHRKGIHRMSWDKLSMHKKDGGMSFKSLGTFNM 60
Query: 489 ALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFR 548
A+LGK+ WR L ++L P NFL A +G +PSFVWR IC +K + +G R
Sbjct: 61 AMLGKQGWRILTKPDTLIARIYKARYFPRCNFLEAELGHNPSFVWRSICKSKFILRAGSR 120
Query: 549 WRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWN 599
W+I DG SI+VW W+ + + + ++RVSD +L + ++W+
Sbjct: 121 WKIGDGTSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPN-QKSWD 170
>IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 20655028-20657384 H
EGN_Mt090430 20090702
Length = 376
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 53/343 (15%)
Query: 641 MKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLE 700
+KS +R+ +D R W ++W +K+PPKVR+ +WR CR L + L G++
Sbjct: 30 VKSAYRLCVEELIDASHLRRPGNWSSIWKLKVPPKVRNLIWRICRLCLSTRIRLHDKGVQ 89
Query: 701 LDTGC-DYYGTTETLVRALVECPRVSFCWQLFGI-----------QLTIGNFSTFLQLLE 748
T C + E + C W+L G+ IG L +L
Sbjct: 90 CPTQCVSCESSHEDMAHLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDMLT 149
Query: 749 HLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPG 808
+V F +WS+W N W V E VV RA+ M+T W+ A K+P
Sbjct: 150 TKQRV-------VFAATVWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPA 202
Query: 809 SGTGTGDPAGSQ-----------------WFSPPVGTFKINFDATLLSSVGHGAVAAIIS 851
+Q W P G +K N DA S+ + I
Sbjct: 203 ESRAATTAPPTQLLSNSAEVNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIH 262
Query: 852 NCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNS 911
+ FV A +S P + + LS S I E D A R+S
Sbjct: 263 DEEGAFVLAKMTSF-----PCLHQ-----------LSDMSLDNIDFELDSKITCDAFRSS 306
Query: 912 VQDWSEFGVVISECKLLLVQ-LPNVTLAWIRRQANDIAYVLAK 953
D SEFG VI+ CK L N + + RRQAN A++LA+
Sbjct: 307 KDDVSEFGHVIASCKALFSAFFINSMVEFTRRQANAAAHLLAR 349
>IMGA|Medtr2g114260.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 26977303-26977923 H
EGN_Mt090430 20090702
Length = 178
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 33/203 (16%)
Query: 362 KNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEV 421
K + I + + +YLG+ + GR + F+FLKD + K + GW +K +S G+
Sbjct: 4 KKEFQSILPIKISTSIQKYLGITTHFGRSKEQDFNFLKDRIWKKLKGWKEKSVSFEGRAF 63
Query: 422 LIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEX 476
LI+AVAQAIP++ MS FL+ + +++++ +WWG KM W E L +K E
Sbjct: 64 LIRAVAQAIPTYIMSCFLLPKGLCSRIEKVVCFFWWGSTEHKKKMHWTKREHLFKSKLEG 123
Query: 477 GLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGI 536
G+GF+ LR FNLA L K+ +G + +F WR I
Sbjct: 124 GMGFKILRGFNLAKLTKQ----------------------------VNIGSNSNFAWRSI 155
Query: 537 CAAKDAICSGFRWRIEDGQSINV 559
AK I G WRI +GQS+N+
Sbjct: 156 YNAKWVIQKGSCWRIGNGQSVNI 178
>IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V3
16870634-16874775 H EGN_Mt090430 20090702
Length = 651
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 191/504 (37%), Gaps = 22/504 (4%)
Query: 465 SWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLS-A 523
SW +C K GLG R NL + K W H ++ + +
Sbjct: 53 SWASICTPKSYAGLGLRTACDMNLTAMMKVGWSLSHKKDAFWVKIIKAKYRCGNDIMPRI 112
Query: 524 GVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVH--LPILPGF 581
+ S +WRGIC + + WR+ G +IN W+ W+ H LPI
Sbjct: 113 QTNKAGSNLWRGICRNWEKVTPNLIWRVGQGDNINFWSDMWVPGAGPLSCHTNLPITIDD 172
Query: 582 EHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLA-TNVQDDILIWHWTDSGIYS 640
+ + V + + A WNL L+ L P I+E I S+P + D L W + G +S
Sbjct: 173 DMLTVKE--FANDAGDWNLSLLVNLLPPWIIEQIRSLPAPHSEASVDSLAWEGSLDGEFS 230
Query: 641 MKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLE 700
H + + + + S+ +K +W + P +++ LW+ R ILL T G+
Sbjct: 231 ----HALAYESILSLTPSNNSNLYKCIWKWQGPERIKFLLWKVARKILLTNLTRNSRGMA 286
Query: 701 LDTGCDYYGTT-ETLVRALVECPRVSFCWQLFGIQLTIGNFSTFLQLLE----HLHKVWE 755
+ C + E+++ + EC W + T NF F +L +L +
Sbjct: 287 PNDRCSICNSEPESIIHTIRECHLAKATWNTI-LGNTSPNFYNFGELQHWFFWNLSRRDI 345
Query: 756 NAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLT----SWKKAQRKSPGSGT 811
+ F + + +W N +N + R +M+T +W + P S
Sbjct: 346 EGWSTIFAVTVDCLWWDRNNYIFNNITLDVVTSTIRINTMVTNIKETWTDLNLRIPKSNN 405
Query: 812 GTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSP 871
+ P GT K+N D + A I + F+ ++ L CS
Sbjct: 406 SSAASTIQNCIPPSSGTVKLNCDGAVKDYGSRAACGGIARDSADTFLWGFSAKLGQCSVV 465
Query: 872 AVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQ 931
L+++ + G S L IE+D L ++ ++ + LL +
Sbjct: 466 HSELWAILKSLEIAKVRGMSIL--TIESDSLMTVKLIQQGFSSSHTCFSLMCKISKLLKE 523
Query: 932 LPNVTLAWIRRQANDIAYVLAKSV 955
++ + I R AN A +AK V
Sbjct: 524 TRSLNILHICRDANVAAGRMAKEV 547
>IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
6317912-6319402 H EGN_Mt090430 20090702
Length = 456
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 196/515 (38%), Gaps = 72/515 (13%)
Query: 247 VGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQL 306
+ +NG + G RG+RQG PLSP LF E LS+ K +G+++ + SR
Sbjct: 3 ISINGSQRGYFKCARGVRQGDPLSPLLFCSAEEVLSRGILKLVDDGKVELIKASRDTQIP 62
Query: 307 SNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSSNTSELNKNAVK 366
S+ +AD + + + +K++ Y + SGQ +N KS IF ++ + V
Sbjct: 63 SHCFYADDLMVYCKGKLYSLEALKDLFTRYASCSGQVINLGKSFIFSGGVSNNMLSTMVN 122
Query: 367 GIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAV 426
+ I L++ YLG P G+ F + D ++ ++ W LLS AG+ L+K+V
Sbjct: 123 LLGFNIGSLSFT-YLGAPIFKGKPNTIHFQPIADKIKLKLASWKAYLLSIAGRVQLVKSV 181
Query: 427 AQAIPSFCMSSFLISVSILVELQRLMNSYWWGGKMRWLSWERLCVAKEEXGLGFRHLRSF 486
Q G M+ R+C +E LG + L
Sbjct: 182 VQ------------------------------GMMK-----RVCADLDERRLGTKSLICL 206
Query: 487 NLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDP--SFVWRGICAAKDAIC 544
+ A K W LH+ + SR S + GI + I
Sbjct: 207 SEATNLKLCWDVLHSNETWAVIIR------SRTLRGTYCIHHHIYSSIRSGIKQEFNTIK 260
Query: 545 SGFRWRIEDGQSINVWTKPWLLRD-----NEFWVHLPILPGFEHIRVSDLILTHGARAWN 599
W +E+G +I W W + N + LP +S I + W+
Sbjct: 261 ENTSWLVENGDNIQFWLDSWCRKPLIQALNLSLNQIQNLPQC----ISSYIQNN---QWD 313
Query: 600 LP--LIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIED 657
P L+H + P + ++T + + ++D LIW + +G SMK +Y +
Sbjct: 314 TPNELLHAM--PDLRRLVTQVTIPVQQKEDELIWCHSTNGTLSMK-------EVYESKKH 364
Query: 658 AWRSSFW-KALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGT-TETLV 715
+ W K +WS PP +WR + L L G L + C +E
Sbjct: 365 HYPKRKWAKLIWSKDYPPSKYLMVWRLMLNKLPTNENLTERGCNLPSMCSLCSKQSENSF 424
Query: 716 RALVECPRVSFCWQLFGIQLTIGNFSTFLQLLEHL 750
ECP W F I N + Q +E +
Sbjct: 425 HLYFECPYSFNIWYWFA---RILNLNLHFQCIEDI 456
>IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
31059249-31058149 H EGN_Mt090430 20090702
Length = 344
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 102/239 (42%), Gaps = 8/239 (3%)
Query: 546 GFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHG 605
G RWRI DG I V PWL ++ W+ P + ++DL++ G + W++ I
Sbjct: 6 GCRWRIGDGTQIRVMHDPWLRNEHGGWLASPQNQDVYDLFLADLMI-EGGKEWDVDKIFD 64
Query: 606 LFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWK 665
L + + PL +VQDD +IW +G+YS+K+G+RI A V W
Sbjct: 65 LLSFESANSVLKTPLFPSVQDDQVIWQEEQNGVYSVKTGYRIDARDVVPASQYQVRGDWN 124
Query: 666 ALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYG-TTETLVRALVECPRV 724
LW + PPK R+ LWR C + + L + C + G ET A + C
Sbjct: 125 KLWKVCSPPKARNLLWRICPGCIPTRVKLVHRQVPCAYLCPWCGLEAETDWHAFIGCTIA 184
Query: 725 SFCWQLFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEE 783
W G+ + + E + V A LW +W + N++ WN E
Sbjct: 185 KESWSFAGLSELLHELVFNICSCESANAVGRGAVL------LWQIWSARNDVVWNDTCE 237
>IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34195188-34196556 H EGN_Mt090430 20090702
Length = 307
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 435 MSSFLISVSILVELQRLMNSYWWGGK------MRWLSWERLCVAKEEXGLGFRHLRSFNL 488
MS FL+ +++ ++++++N +WWG + WLS +L V K G+GF+ L +FNL
Sbjct: 1 MSVFLLPTTLVDQIEKMINGFWWGNGGSNRRGIHWLSCNKLRVHKNHGGMGFKDLTAFNL 60
Query: 489 ALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFR 548
A+LGK+ W+F + L P ++L A +G + SFVWR I +A+ SG R
Sbjct: 61 AMLGKQGWKFQFQSECLVSKLFKARYFPQSDYLGAKLGHNLSFVWRSIYSARRVARSGVR 120
Query: 549 WRIEDGQSINVWTKPWL 565
W+I + +I ++ PWL
Sbjct: 121 WKIGNSVNIPIFDAPWL 137
>IMGA|Medtr7g084960.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
18459835-18459356 H EGN_Mt090430 20090702
Length = 144
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 16/154 (10%)
Query: 477 GLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGI 536
G+ F++L +FNLA+LGK+ WR + N +SL P NF + +G PSFVWR I
Sbjct: 7 GMSFKNLPTFNLAMLGKQGWRLMINPDSLVARLYKAKYYPRCNFFESTLGHKPSFVWRSI 66
Query: 537 CAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGAR 596
C DG+ I+VW W+ D H +RVSD +L H +
Sbjct: 67 C---------------DGEDISVWYNKWIANDVTLIPHANGHFPLADLRVSDCML-HDRK 110
Query: 597 AWNLPLIHGLFNPSIVEIITSIPLATNVQDDILI 630
WNLP + +F+ +VE I + PL +V +D LI
Sbjct: 111 EWNLPFLQSIFDHHVVENIVNTPLYPSVTEDRLI 144
>IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
13863857-13863375 E EGN_Mt090430 20090702
Length = 116
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 58/87 (66%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
IM+CV SVKY V VN + GPI+P GLR+G PLSPYLFILCA+GL+ L K++ G L
Sbjct: 30 IMMCVESVKYKVLVNQESEGPILPGSGLRKGDPLSPYLFILCAQGLTSLIDKAEGRGDLH 89
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEAS 322
G RV AP ++LLF D F A+
Sbjct: 90 GVRVCTGAPTFTHLLFVDDCFLFCRAT 116
>IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
31944726-31943241 H EGN_Mt090430 20090702
Length = 351
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 43/221 (19%)
Query: 435 MSSFLISVSILVELQRLMNSYWWGG-----KMRWLSWERLCVAKEEXGLGFRHLRSFNLA 489
MS FL+ + ++R++ S+WWGG K+ W + L +K+ G GF++LR FNL
Sbjct: 1 MSCFLLPQGLCDRIERVVCSFWWGGSDSNRKIHWTKNDSLFQSKDSGGFGFKNLRDFNLD 60
Query: 490 LLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRW 549
+L K+ WRF P N G W
Sbjct: 61 MLAKQAWRFY--------------TQPHSNLQKGGC-----------------------W 83
Query: 550 RIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNP 609
RI +G SI +W W+ +N+F P + V DL L G+ W+ LI F
Sbjct: 84 RIGNGHSIKIWEDNWIPSNNDFKTISPNIGNPNIQLVKDLFLQDGS-GWDTDLIKNNFLH 142
Query: 610 SIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVAS 650
+ IT IP+ ++D +W +G+YS+K+G++I+ S
Sbjct: 143 IDRDNITQIPIINTSKNDEYMWMHEQNGVYSVKNGYQILQS 183
>IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
17724162-17724986 H EGN_Mt090430 20090702
Length = 274
Score = 92.4 bits (228), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 99/221 (44%), Gaps = 11/221 (4%)
Query: 530 SFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDL 589
S+ WR A+ I G W + +G IN+W WL N F V + +VSDL
Sbjct: 22 SYSWRSFLQARWVIQKGSYWTVGNGNLINIWEDRWLPDQNGFKVFSKKPNNCDIQKVSDL 81
Query: 590 ILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVA 649
I + +WN PLIH LF P + I IPL +DD L+W T++G YS+K G+ +
Sbjct: 82 I-DYTTLSWNTPLIHKLFLPFETDQIHQIPLINTNEDDDLVWAHTNNGSYSVKYGYHFIK 140
Query: 650 SLYVDIEDAWRSS------FWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDT 703
+ + +S K LW+ IP +WR + L VK L + G+ D
Sbjct: 141 NREEQAQGQPGNSSTCCDPISKNLWNQTIPQNKIQLIWRIMNNGLPVKRNLMQCGIRCDP 200
Query: 704 GCDYYGT-TETLVRALVECPRVSFCWQLFGIQLTIGNFSTF 743
C G E++ ++C V W F LT+ NF
Sbjct: 201 LCPGCGNHIESISHTFMQCSWVQRVW--FASPLTL-NFQNL 238
>IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26788772-26788104 H EGN_Mt090430 20090702
Length = 222
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 490 LLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRW 549
+L K+ WRF +SL P + L A +G +PS+ WR I + I G W
Sbjct: 1 MLAKQVWRFHTKPHSLISRCFKAKYFPQSDILQAPLGCNPSYAWRSIHNSIWVILKGSCW 60
Query: 550 RIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNP 609
+I +G+S VW W+ N F + + F V DLI + +W+ +++ LF P
Sbjct: 61 KIGNGESAKVWGDNWVPLHNGFKILTQKMEPFSIRHVKDLI-NMDSFSWDTEILNNLFLP 119
Query: 610 SIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSS-----FW 664
+ I IP+ D +W +G+Y++KSG++ + + SS W
Sbjct: 120 IDKDHIEQIPIINTTNIDEYMWMHEPTGVYTVKSGYKAIKEWQDQQFSSTASSSCDTQVW 179
Query: 665 KALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGC 705
K LW++ P+ + LWR ++ L V++ L+ G+ C
Sbjct: 180 KKLWAIHTIPRHKVLLWRILQNSLPVRSELSNRGVPCSILC 220
>IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse
transcriptase); Endonuclease/exonuclease/phosphatase
AC233655.2 202219-200303 H EGN_Mt090430 20090702
Length = 567
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 61/90 (67%)
Query: 226 LGFXPALGDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLF 285
+GF + + +CV +VKY + VN + VGP+IP RGLRQG PLSPYLFILCA G++ L
Sbjct: 478 MGFNSVWINWMHMCVTNVKYHILVNDEIVGPVIPGRGLRQGDPLSPYLFILCAGGMTSLI 537
Query: 286 SKSKHEGRLKGCRVSRAAPQLSNLLFADGS 315
+++ L G +V AP +S+LLFAD S
Sbjct: 538 KQAERNNILHGIKVCCIAPAISHLLFADDS 567
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 2 LKDANGEWISDNNXLKGMVSDYFXNLFEXGDVDLSPVVGLFSPLVSDNDNSMLLGDLSVD 61
+KD N + ++ + + +YF NLF + PV+ +P ++ DN++L D
Sbjct: 309 MKDDNTK-VTTQEDICTLSLEYFSNLFAPTPCNTHPVLQAVAPCINAEDNNLLTTPFRDD 367
Query: 62 EVKLAVNQMHADKSPGMDGLNPRFYXRFLGCSGSQ 96
E + V QMH+DK+PG DGLNP FY RF G +
Sbjct: 368 EFRDVVFQMHSDKAPGSDGLNPAFYKRFSALCGGE 402
>IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
1330505-1330813 H EGN_Mt090430 20090702
Length = 102
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 376 NYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCM 435
++ +YLG+P+ +GR +R +F FL+D + K + GW ++ LS AG+ VLIK VA+AIP++ M
Sbjct: 6 HFTKYLGMPTGMGRNKRQVFEFLQDRIWKKLKGWKERNLSFAGRSVLIKVVAEAIPTYIM 65
Query: 436 SSFLISVSILVELQRLMNSYWWG-----GKMRWLSW 466
S FL+ S +L++L+ + WWG GK W++W
Sbjct: 66 SGFLLPKSFCNQLEKLICNIWWGSNTDQGKTHWINW 101
>IMGA|Medtr5g068610.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 24592281-24593243 H
EGN_Mt090430 20090702
Length = 320
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 9/285 (3%)
Query: 675 KVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSFCWQLFG- 732
K + FLWR R +L + L G+ C + T E + C V W+ G
Sbjct: 12 KGKFFLWRAVRGVLPTRMRLQDKGVPCTDCCPFCETNYENDWHVFMGCEEVKTVWRTAGL 71
Query: 733 ---IQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVV 789
I + + ++F L ++ M LW +W N+ W+ + +
Sbjct: 72 CDLIAEIVADAASFANCFFSLLCRLTTNKCKDMTMILWCIWRRRNDKVWDGDLKLVSIAI 131
Query: 790 TRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVAAI 849
A+ L W+ A R++ T QW P G K N DA + + +
Sbjct: 132 QLAREALFQWQIA-RQNTAEPHQTQQQQTIQWQPPAQGVLKCNVDAAIFNELKSLCTCIC 190
Query: 850 ISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLS-GYSNLKIQIETDCLQVYCAM 908
I + + AAT+ +G P AEA LR + WL G S+ + IE DC V ++
Sbjct: 191 IRDHRGQIIKAATNWYEGNPLPQEAEAVGLRDAILWLGELGLSD--VHIELDCKIVVDSI 248
Query: 909 RNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAYVLAK 953
+ + +EFG +I+ C LL Q N ++++RRQAN + + LA+
Sbjct: 249 CDKNNNQAEFGNIIANCMSLLQQFTNFKISFVRRQANVVTHNLAR 293
>IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 19990-20214 H
EGN_Mt090430 20090702
Length = 74
Score = 85.9 bits (211), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/73 (57%), Positives = 49/73 (67%)
Query: 254 VGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFAD 313
VG IIP RGLRQG PLSPYLFILCAEGLS L K + G L+G + AP + +LLFAD
Sbjct: 2 VGLIIPGRGLRQGDPLSPYLFILCAEGLSTLIDKDERCGDLRGISICTHAPTICHLLFAD 61
Query: 314 GSLFFFEASWTQA 326
FF A+ +A
Sbjct: 62 DCFLFFRANEKEA 74
>IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
40247310-40247920 H EGN_Mt090430 20090702
Length = 187
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 49/70 (70%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
+M+CV+SV Y V N D VGPI+P RGLRQG PLSPYLFIL AEGLS L K + G +
Sbjct: 106 MMMCVSSVTYSVLTNFDRVGPIVPGRGLRQGDPLSPYLFILVAEGLSTLIHKIVNSGDIH 165
Query: 296 GCRVSRAAPQ 305
G +V R AP
Sbjct: 166 GVQVCRGAPD 175
>IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13557404-13554904 H EGN_Mt090430 20090702
Length = 447
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 42/154 (27%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
IM+CV V Y+V VN + VGPI P RG RQG PLS YLFILCA K + E +
Sbjct: 138 IMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCA--------KDEREANV- 188
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
MK+IL TYEAASGQA++ KS +++S
Sbjct: 189 ---------------------------------MKHILETYEAASGQAISLPKSKVYYSR 215
Query: 356 NTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGR 389
+ ++ + I G + +YLGL +IG+
Sbjct: 216 SVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQ 249
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 516 PSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHL 575
P +FLS+ +G + FV R I +AK + G RWRI G +I + + PWL + +
Sbjct: 254 PHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPWLKDECSLTMDN 313
Query: 576 PILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTD 635
P+ H++V D I + WN +I LF+ + ++I + L V +D LIW
Sbjct: 314 PMYVPLSHVKVQD-ITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVHEDKLIWKVEK 372
Query: 636 SG 637
+G
Sbjct: 373 NG 374
>IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13373662-13371162 H EGN_Mt090430 20090702
Length = 447
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 42/154 (27%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
IM+CV V Y+V VN + VGPI P RG RQG PLS YLFILCA K + E +
Sbjct: 138 IMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCA--------KDEREANV- 188
Query: 296 GCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFFSS 355
MK+IL TYEAASGQA++ KS +++S
Sbjct: 189 ---------------------------------MKHILETYEAASGQAISLPKSKVYYSR 215
Query: 356 NTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGR 389
+ ++ + I G + +YLGL +IG+
Sbjct: 216 SVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQ 249
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 516 PSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHL 575
P +FLS+ +G + FV R I +AK + G RWRI G +I + + PWL + +
Sbjct: 254 PHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPWLKDECSLTMDN 313
Query: 576 PILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTD 635
P+ H++V D I + WN +I LF+ + ++I + L V +D LIW
Sbjct: 314 PMYVPLSHVKVQD-ITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVHEDKLIWKVEK 372
Query: 636 SG 637
+G
Sbjct: 373 NG 374
>IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V3
5113686-5112454 H EGN_Mt090430 20090702
Length = 410
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 149/375 (39%), Gaps = 44/375 (11%)
Query: 615 ITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIED------AWRSSFWKALW 668
I IP+ D L+W + +GIYS+KSG++ + S + + + ++ WK LW
Sbjct: 14 IEQIPIINTTNQDELMWMYELNGIYSVKSGYQAIRSWQIQQKHNTTPNCSSETTVWKKLW 73
Query: 669 SMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSFC 727
+ P+ + LWR + L V++ L + G+ C + ET+ + CP +
Sbjct: 74 KLHTIPRHKVILWRILHNSLPVRSELNKRGIHCSILCPRCNSKMETITHTFMTCPNILRT 133
Query: 728 WQLFGIQLTIG-------NFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQ 780
W FG LTI NF +L LH+ + ++S+W S N +
Sbjct: 134 W--FGSSLTIKFPDQPNPNFVNWLFDFI-LHE--DEQIIIQTAAIIYSIWFSRNLSIFEN 188
Query: 781 VEEGPYQVVTRAKSMLTSWKKAQRKSPG-----------------SGTGTGDPAGSQWFS 823
++ RA+ + +K A + PG S T ++W
Sbjct: 189 KTLPEEDIILRAEHSIQEYKAATKTDPGQADSMTRSSNASTTHNNSTACTTHNNSTKWRR 248
Query: 824 PPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVL 883
P G K N DA L G + AII + ++AAT + G +AEA AL + +
Sbjct: 249 PETGFVKANGDAN-LKYAGSWGIGAIIRDEEGLVMAAATWKVNGGEDTLMAEAHALISTM 307
Query: 884 SWLLSGYSNLKIQIETDCLQVYCAMRNSV------QDWSEFGVVISECKLLLVQLPNVTL 937
L ++ E+D ++ ++ ++ S G +I E L +
Sbjct: 308 R-LAKDCGFRRVYFESDNKRLISLIKEEQLKTEEKRNRSYTGQMIKEIWKLQLSFDKCNF 366
Query: 938 AWIRRQANDIAYVLA 952
+ R N +A LA
Sbjct: 367 MFTHRSGNKVADQLA 381
>IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3
22005738-22006807 E EGN_Mt090430 20090702
Length = 168
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 18/149 (12%)
Query: 546 GFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHG 605
G RWRI +G+SI VWT PWL D +V+DL+ +WN +I G
Sbjct: 8 GQRWRIGNGKSIAVWTDPWLREDE---------------KVADLM---SGESWNWGMIAG 49
Query: 606 LFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWK 665
+FN + I+++ L +D +IW + G Y+++S +R VD + S W
Sbjct: 50 IFNDHDRKAISNLALLNRDGEDRIIWKFNRYGNYTVRSAYRYAMETLVDNVEYRVSGEWL 109
Query: 666 ALWSMKIPPKVRHFLWRCCRDILLVKATL 694
+WS+KIP +++ FLWR R L + L
Sbjct: 110 KMWSLKIPQRIKVFLWRAVRGALPTRMRL 138
>IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34427458-34427919 H EGN_Mt090430 20090702
Length = 153
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Query: 546 GFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHG 605
G RWRI G +I + PWL + P+ H++V ++I + WN LI
Sbjct: 6 GARWRIGSGDTIPLLDAPWLKDGRSLTMDNPMYAPLSHVKVPNII-EPSTKVWNTTLISN 64
Query: 606 LFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWK 665
+FN + ++I + PL V +D L W +G YS+ S +RI + D + W
Sbjct: 65 MFNHNTTQLILNTPLQPLVHEDKLTWKAEKNGNYSVSSAYRICVTEIADKSHLHIPARWN 124
Query: 666 ALWSMKIPPKVRHFLWR 682
+K+PP +R+F+WR
Sbjct: 125 LTRKLKVPPMIRNFVWR 141
>IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
1329629-1330366 H EGN_Mt090430 20090702
Length = 245
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%)
Query: 226 LGFXPALGDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLF 285
+GF IM CV +V + + ++G P+RGLRQG PLSPYLFI+C + S+L
Sbjct: 148 MGFPHQFVSTIMRCVTTVTFSILIDGSNSKEFQPQRGLRQGDPLSPYLFIICVDVFSELI 207
Query: 286 SKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEAS 322
+K+ + + G ++ AP++++L FAD +L F +A+
Sbjct: 208 NKANNNKLIHGVKIVNGAPEITHLFFADANLTFCKAT 244
>IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23354620-23355450 H EGN_Mt090430 20090702
Length = 276
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%)
Query: 394 IFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMN 453
I +F ++ + + ++ W LL+K G+ L+K+V +IP + M + S + RL
Sbjct: 8 ILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAI 67
Query: 454 SYWWGG----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXX 509
++ W G ++ + WE++ K+ GL R R N +LLG+ WR N +SL
Sbjct: 68 NFLWKGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVKV 127
Query: 510 XXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPW----L 565
+ L+ + S W I A+ + GF +R+ D S + W W
Sbjct: 128 LTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDNS-SFWFVNWSGIGK 185
Query: 566 LRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQ 625
L + +V + L ++RV D+ + AWN I+ SI + + +P+ N +
Sbjct: 186 LTEKVLYVDIHDL----NLRVKDVFVNG---AWNFNHIYTTLPASITDSLKILPICLNSR 238
Query: 626 -DDILIWHWTDSGIYSMKSGH 645
D W GIYS + G+
Sbjct: 239 VTDGYTWKGNLHGIYSAEDGY 259
>IMGA|Medtr4g084240.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr04_pseudomolecule_IMGAG_V3
17645335-17644567 H EGN_Mt090430 20090702
Length = 185
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 81/256 (31%)
Query: 451 LMNSYWWGGK------MRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNS 504
+ N +WWG + WLSW++L + K G+GF L +FNLA+L K+ W+F N S
Sbjct: 1 MKNFFWWGHGGANNRGISWLSWKKLLMHKVHAGVGFIDLPAFNLAMLAKQGWKFQTNPES 60
Query: 505 LXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPW 564
L FL+A +G +PS+VW I A + + RWR +D
Sbjct: 61 L--------------FLTARLGDNPSYVWDNILQACLIVRNEVRWRSKD----------- 95
Query: 565 LLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNV 624
+ + + N S+V +T
Sbjct: 96 -------------------------------------IAYDVLNTSLVNQVT-------- 110
Query: 625 QDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCC 684
+D LIW +GIYS+KS R+ +D FW +W +K+PPK++ +
Sbjct: 111 -NDKLIWKAEKNGIYSVKSTFRLCVEDLMDTTHLRCPEFWMGIWRLKVPPKIK----KSH 165
Query: 685 RDILLVKATLARMGLE 700
D +L + RM L+
Sbjct: 166 VDDMLDEILPTRMQLK 181
>IMGA|Medtr1g117590.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 25276151-25276918 H
EGN_Mt090430 20090702
Length = 235
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 78/185 (42%), Gaps = 2/185 (1%)
Query: 771 LSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFK 830
L N WN+V + V RAK+ML WK A+ S T +W P G FK
Sbjct: 26 LQRNNKIWNEVVDAQVFVFDRAKTMLQDWKSAKLIRGASSTHQQRAHNVKWVKPSPGRFK 85
Query: 831 INFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGY 890
N DA+ + I + N FV A + EA L L W +
Sbjct: 86 CNIDASFSEVSNMVRIGMCIRDENDTFVLAKQVRFSPICEVHIGEALGLLAALDW-MHNL 144
Query: 891 SNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQL-PNVTLAWIRRQANDIAY 949
S + E D +V + D +EFG +I CK L N + ++RRQAN++A+
Sbjct: 145 SLGPVDFELDAKRVVDGFNSLNCDVTEFGNIIEHCKSLCSNFYVNSRVEFVRRQANEVAH 204
Query: 950 VLAKS 954
LAK+
Sbjct: 205 NLAKA 209
>IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial
chr05_pseudomolecule_IMGAG_V3 35125187-35123779 E
EGN_Mt090430 20090702
Length = 360
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 24/302 (7%)
Query: 598 WNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIED 657
WN LI F P I +PL D L+W ++++G+YS+K+G++ + + +
Sbjct: 13 WNKKLIEDTFIPFEGIQIQQLPLTDKENQDSLMWMFSETGVYSVKTGYQAIQCWKNNRDQ 72
Query: 658 AWRS-----SFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT- 711
S + WK +W ++ P+ + +W+ L V++ L G+ C +T
Sbjct: 73 GPSSEEIMKTVWKKVWGLQTIPRHKVLIWKIINRALPVRSELINRGIRCSLLCPRCDSTI 132
Query: 712 ETLVRALVECPRVSFCWQLFGIQLTIG----NFSTFLQLLEHLHKVWENAFFENFVMGLW 767
ET+ + C W FG QL I N + F+ L + + L+
Sbjct: 133 ETINHLFLNCEHTRREW--FGSQLGINFQNENLTDFIDWLISFILNNDKSTIITMAALLY 190
Query: 768 SVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQR---------KSPGSGTGTGDPAG 818
SVW + N+L + + V+ RAK+ + S+K Q+ S S P
Sbjct: 191 SVWHARNQLVFKNKDIHGEVVIQRAKNSILSYKNVQQADLDHLNNIDSTRSMHRAQVPTK 250
Query: 819 SQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQ-GCSSPAVAEAQ 877
+W P K+N D L G +I+ + G V A+ + ++ G AEA
Sbjct: 251 VKWVRPEKDVIKVNSDVNLSYPDSWG--IGVIARNDEGLVMASGTWMRLGFHCAGTAEAW 308
Query: 878 AL 879
L
Sbjct: 309 GL 310
>IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V3
23474829-23476616 H EGN_Mt090430 20090702
Length = 477
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 17/241 (7%)
Query: 391 RRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQR 450
+ I +F ++ + + ++ W LL+K G+ L+K+V +IP + M + S + R
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 451 LMNSYWWGG----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLX 506
L ++ W G ++ + WE++ K+ GL R R N +LLG+ WR N +SL
Sbjct: 65 LAINFLWKGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLW 124
Query: 507 XXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQS----INVWTK 562
+ L+ + S W I A+ + GF +R+ D S +N W+
Sbjct: 125 VKVLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDNSSFWFVN-WSG 182
Query: 563 PWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLAT 622
L + +V + L ++RV D+ + AWN I+ SI + + +P+
Sbjct: 183 IGKLTEKVLYVDIHDL----NLRVKDVFVN---GAWNFNHIYTTLPASITDSLKILPICL 235
Query: 623 N 623
N
Sbjct: 236 N 236
>IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
10317892-10316821 H EGN_Mt090430 20090702
Length = 341
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 100/247 (40%), Gaps = 25/247 (10%)
Query: 478 LGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGIC 537
+G + L+ FNLA+L K+ R H+ S P NFL AG+G +P F WR I
Sbjct: 1 MGVKTLKDFNLAMLAKQGLRIFHHGESFLTTCLKSHYFPRCNFLQAGIGFNPGFTWRSIV 60
Query: 538 AAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARA 597
A R+ED WL + P G V++LI R
Sbjct: 61 QA----------RLED---------IWLPHQYGHKLWSPKPSGSNIHLVAELIHEECGR- 100
Query: 598 WNLPLIHGLFNPSIVEIITSIPLATNVQDDILIW--HWTDSGIYSMKSGHRIVASLYVDI 655
WN L++ F P + I IP+ + Q D IW + D +K + S Y
Sbjct: 101 WNAHLVNEFFLPFKAQQILQIPVFPSQQQDCFIWAVNKNDEFTEFLKERRERLNSNYS-- 158
Query: 656 EDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYG-TTETL 714
+ ++ W LW +K P+ H +W + L V++ L G++ C E++
Sbjct: 159 HSSLQNGVWNKLWRVKTIPRHTHLIWCILHNWLPVRSALFNRGVQCSPLCCLCDQQQESI 218
Query: 715 VRALVEC 721
+EC
Sbjct: 219 NHLFMEC 225
>IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease H,
putative chr04_pseudomolecule_IMGAG_V3 34349081-34347530
H EGN_Mt090430 20090702
Length = 346
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 17/241 (7%)
Query: 391 RRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQR 450
+ I +F ++ + + ++ W LL+K G+ L+K+V +IP + M + S + R
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 451 LMNSYWWGG----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLX 506
L ++ W G ++ + WE++ K+ GL R R N +LLG+ WR N +SL
Sbjct: 65 LAINFLWKGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLW 124
Query: 507 XXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPW-- 564
+ L+ + S W I A+ + GF +R+ D S + W W
Sbjct: 125 VKVLTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDNS-SFWFVNWSG 182
Query: 565 --LLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLAT 622
L + +V + L ++RV D+ + AWN I+ SI + + +P+
Sbjct: 183 IGKLTEKVLYVDIHDL----NLRVKDVFVNG---AWNFNHIYTTLPASITDSLKILPICL 235
Query: 623 N 623
N
Sbjct: 236 N 236
>IMGA|Medtr6g024980.1 Putative ribonuclease H protein At1g65750,
chr06_pseudomolecule_IMGAG_V3 5466766-5467589 H
EGN_Mt090430 20090702
Length = 259
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 111/270 (41%), Gaps = 27/270 (10%)
Query: 362 KNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEV 421
K ++ I +I + G L P + GR R++++ + D V K ++ W +L+KAG+
Sbjct: 7 KRVIQDISTIIFVADLGHCLCFPLIKGRVSRNVYNNVVDKVLKRLATWKGNILNKAGRAC 66
Query: 422 LIKAVAQAIP-SFCMSSFLISVSILVELQRLMNSYWWGGKMRWLSWERLCVAKEEXGLGF 480
L+K+V AIP + F + L R N ++W + K GLG
Sbjct: 67 LVKSVTTAIPVRYDGKEFPLGGD---GLSRTWNH---------VNWNMVTTPKRFGGLGI 114
Query: 481 RHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAK 540
R R +LALL K W LHN + L + + PS RGI A
Sbjct: 115 REARLTDLALLSKLVWNMLHNKDKLWVKVLSHKYLYNTSLWMNKKHNKPSITCRGILHAI 174
Query: 541 DAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHL-PILPGFEHIRVSDLIL----THGA 595
+ G+ +R+ G S ++W N W L P+ + +SD ++
Sbjct: 175 TSFAPGYNFRVGSGDS-SIW--------NNDWTQLGPLCQLVPFVNISDSVMCLKDVWEN 225
Query: 596 RAWNLPLIHGLFNPSIVEIITSIPLATNVQ 625
WNL + + IV I +P TN+
Sbjct: 226 GKWNLQGLATMIPTDIVHYIHQLPAPTNLD 255
>IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
13465118-13466957 H EGN_Mt090430 20090702
Length = 509
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 234 DLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGR 293
D I+ + S + + +NG VG RG+RQG PLSP LF + E LS+ + GR
Sbjct: 277 DWIITILHSARLSININGKSVGFFKCTRGVRQGDPLSPILFCIAEEVLSRGIEELVVRGR 336
Query: 294 LKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIFF 353
+ R +R+ S+ L+AD L F + + + ++L Y SGQ +N QKS F+
Sbjct: 337 MTQIRATRSLYIPSHCLYADDILIFCKGTLANVKNLMHLLEGYGNYSGQLINAQKSK-FY 395
Query: 354 SSNTSELNKNAVKGIFGV---IAPLNYGRYLGLPSLIGRERRHIFSFLKDXVRKLVSGWN 410
+ + NA+ + G PLN YLG+ G+ + + D ++ ++ W
Sbjct: 396 TGSIPLSKINAICSLTGFSQGCIPLN---YLGILLFKGKPKSIYLKPIVDKIQLRLNAWK 452
Query: 411 QKLLSKAGKEVLIK 424
LL+ G+ L K
Sbjct: 453 GTLLTFMGRVQLRK 466
>IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5982582-5983034 H EGN_Mt090430 20090702
Length = 150
Score = 75.9 bits (185), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 6/84 (7%)
Query: 422 LIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWW--GGK----MRWLSWERLCVAKEE 475
+IK + Q+IP++ +S FLI S+ E++++MN +WW GG +RWLSW++L V K
Sbjct: 1 MIKYILQSIPTYFISIFLIPSSLGDEIEKIMNYFWWENGGNRNKGIRWLSWDKLYVHKRS 60
Query: 476 XGLGFRHLRSFNLALLGKRYWRFL 499
G+GF++L FN+AL K+ WR +
Sbjct: 61 RGMGFKNLYMFNMALHDKQVWRLM 84
>IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23360766-23362551 H EGN_Mt090430 20090702
Length = 379
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 394 IFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMN 453
I +F ++ + + ++ W LL+K G+ L+K+V +IP + M + S + RL
Sbjct: 8 ILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAI 67
Query: 454 SYWWGG----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXX 509
++ W G ++ + WE++ K+ GL R R N +LLG+ WR N +SL
Sbjct: 68 NFLWKGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVKV 127
Query: 510 XXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPW----L 565
+ L+ + S W I A+ + GF +R+ D S + W W
Sbjct: 128 LTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDNS-SFWFVNWSGIGK 185
Query: 566 LRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATN 623
L + +V + L ++RV D+ + AWN I+ SI + + +P+ N
Sbjct: 186 LTEKVLYVDIHDL----NLRVKDVFVN---GAWNFNHIYTTLPASITDSLKILPICLN 236
>IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23480965-23481815 H EGN_Mt090430 20090702
Length = 251
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 17/238 (7%)
Query: 394 IFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMN 453
I +F ++ + + ++ W LL+K G+ L+K+V +IP + M + S + RL
Sbjct: 8 ILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDRLAI 67
Query: 454 SYWWGG----KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXX 509
++ W G ++ + WE++ K+ GL R R N +LLG+ WR N +SL
Sbjct: 68 NFLWKGSSNFRIYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCDSLWVKV 127
Query: 510 XXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPW----L 565
+ L+ + S W I A+ + GF +R+ D S + W W
Sbjct: 128 LTHKYFHADKLLTV-TRKSGSVTWNAIMKARFTLRDGFDFRLGDDNS-SFWFVNWSGIGK 185
Query: 566 LRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATN 623
L + +V + L ++RV D+ + AWN I+ SI + + +P+ N
Sbjct: 186 LTEKVLYVDIHDL----NLRVKDVFVNG---AWNFNHIYTTLPASITDSLKILPICLN 236
>IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.7
10132-10811 E EGN_Mt090430 20090702
Length = 170
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 464 LSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSA 523
+S E+L V G+ F+ L SF +A+LGK+ WRF + SL + +F+ +
Sbjct: 1 MSLEKLSVHNCFGGMRFKDLTSFIMAMLGKQGWRFQTDPTSLVSRLFKARYFSNSSFIQS 60
Query: 524 GVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEH 583
+G +PS+V+R I +AK + W + G +I PWL
Sbjct: 61 SIGHNPSYVYRSIFSAKIMVKHDALWPVGSGANIPFLGAPWL------------------ 102
Query: 584 IRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKS 643
+L + +F P + I + PL V +D LIW SG Y ++S
Sbjct: 103 -----------KDGLSLSTTNSIFEPLFAQRILNTPLQHLVTEDKLIWKGDKSGKYFVRS 151
Query: 644 GHRI 647
+RI
Sbjct: 152 AYRI 155
>IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26369293-26369057 H EGN_Mt090430 20090702
Length = 78
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Query: 422 LIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWW--GGK----MRWLSWERLCVAKEE 475
+IK+V QAIPS+ MS FL+ S++ +++++N++WW GG + WLSWE+L + K+
Sbjct: 1 MIKSVLQAIPSYVMSIFLLLSSLIDAIEKMLNAFWWEHGGSNNRGIHWLSWEKLTLHKQY 60
Query: 476 XGLGFRHLRSFNLALLGK 493
G+ F+ L +FNLA+LGK
Sbjct: 61 GGMSFKDLTAFNLAMLGK 78
>IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26789109-26788828 H EGN_Mt090430 20090702
Length = 93
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 383 LPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISV 442
+P+ GR + F F+ D + K + GW +K LS G+ VLI+AVAQAIP++ MS FL+
Sbjct: 1 MPTQFGRSKEQDFHFIMDKIWKKLKGWKEKCLSFEGRGVLIRAVAQAIPTYYMSCFLLPK 60
Query: 443 SILVELQRLMNSYWWG--GKMRWLSWER 468
+ ++++ + S+WWG G R + W +
Sbjct: 61 GLCTKIEKAVCSFWWGTAGDKRKIHWTK 88
>IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
8248910-8249829 H EGN_Mt090430 20090702
Length = 241
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 516 PSRNFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHL 575
P ++L +G +P+F WR I ++ + G R I +GQ ++V PW+ E W+
Sbjct: 18 PHSSYLGPKLGYNPNFAWRSIWNSRQLLLYGCRCTIGNGQQVSVMNDPWVRGTREKWIQS 77
Query: 576 PILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTD 635
P G +RVSDLI+ R W++ + LF +V+ I PL V +D + W
Sbjct: 78 PQSQGVRSLRVSDLIVDE-ERVWDIDKLESLFPDDMVQAILDTPLFAEVHNDRIAWMKER 136
Query: 636 SG 637
SG
Sbjct: 137 SG 138
>IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
21818522-21818196 H EGN_Mt090430 20090702
Length = 108
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 56/96 (58%)
Query: 237 MLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKG 296
M+CV S+ Y V VN + I RGLR+G PLS YLFILC +G+S L ++ R+ G
Sbjct: 1 MMCVGSIFYSVLVNDETTNLIYLGRGLRKGDPLSLYLFILCMKGISMLMRQTYRGDRMHG 60
Query: 297 CRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNI 332
++ R P +S+LL +G F +A+ + MK I
Sbjct: 61 VQIFRNEPIMSHLLVVNGCFPFCKANCVEDENMKEI 96
>IMGA|Medtr7g068050.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 13863114-13862631 H
EGN_Mt090430 20090702
Length = 114
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 461 MRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNF 520
+RWLSW++L V K G+GF++L FN+ALLG + WR + P
Sbjct: 14 IRWLSWDKLFVHKRNGGMGFKNLYLFNMALLGNQVWRLMSQ--------------PENAI 59
Query: 521 LSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLL 566
A G + S+VW+ I A + G RW+I +G I V+ WL+
Sbjct: 60 FEANKGNNLSYVWKSIHEAIPMVKQGTRWKIGNGDKIRVFQDRWLV 105
>IMGA|Medtr2g056130.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 15253178-15253955 H
EGN_Mt090430 20090702
Length = 128
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 57/111 (51%)
Query: 588 DLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRI 647
D ++ +N+ ++ +F+P + E T PL +V D LIW G Y ++S +R+
Sbjct: 12 DSLIDQNNHGYNVEVVEQMFDPEVREPHTYYPLIQSVYKDKLIWKAEKDGQYLVRSSYRL 71
Query: 648 VASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMG 698
+ VD + S W +W +++P KV +F+WR CR+ L A L G
Sbjct: 72 CVNTIVDNSHLHKPSGWNEIWKLEVPSKVNNFVWRVCRNCLPTWARLTYRG 122
>IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
1138065-1137052 H EGN_Mt090430 20090702
Length = 208
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 499 LHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGIC-AAKDAICSGFRWRIEDGQSI 557
+HN + L P +FL A VG PS+ WR I A D I WR+ DG I
Sbjct: 1 MHNDDLLISQCLKERYFPRISFLRAFVGYCPSYTWRSIMQACVDVIEKIDIWRVRDGHLI 60
Query: 558 NVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITS 617
++W WL N + P + + VSD I R WN PLI+ F P + I
Sbjct: 61 HIWEDNWLSYQNGHKIWSPKPSNCDIMFVSDFI-HDDIRCWNAPLINDTFLPFEAQQILQ 119
Query: 618 IPLATNVQDDILIWHWTDSGIYSMKSGHRIVAS 650
+P + D +W + S I+S+KS + + +
Sbjct: 120 LPFFFSQLQDEFVWDVSRSTIFSVKSAYHFLKT 152
>IMGA|Medtr7g127430.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 29873082-29875620 E
EGN_Mt090430 20090702
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 559 VWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSI 618
+WT PWL D +V + G E ++V+DL+ +GA +WN LI G+FN E ++ +
Sbjct: 118 IWTDPWLREDGNSYVSSEKVQGTESMKVADLMDINGA-SWNWELIAGIFNEQDREAVSKL 176
Query: 619 PLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDI 655
L +DD LIW + + G Y++KS +R+ ++ +D+
Sbjct: 177 VLLNRDRDDKLIWKFNNQGNYTVKSAYRLSSAESMDV 213
>IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fold
AC225507.11 35556-36938 E EGN_Mt090430 20090702
Length = 358
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 141/346 (40%), Gaps = 39/346 (11%)
Query: 630 IWHWTDSGIYSMKSGHRIVASLYVDIE-----DAWRSSFWKALWSMKIPPKVRHFLWRCC 684
+W ++++G Y++KSG+ + S + + ++ WK LW++ P+ + +WR
Sbjct: 1 MWMYSNNGNYTVKSGYEALQSWKNNSNPGPSTSSQNNNIWKKLWALHTIPRHKMIVWRIL 60
Query: 685 RDILLVKATLARMGLELDTGCDY-YGTTETLVRALVECPRVSFCWQLFGIQLTIG----- 738
+ L V+ L + G+ C Y ET + C R W FG QL+I
Sbjct: 61 HNTLPVRTELNKRGVNCPPLCPRCYSNLETTNHIFMSCERTQRVW--FGSQLSIRFPDNS 118
Query: 739 --NFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNE-------LKWNQVEEGPY--Q 787
NFS + L + + E + + +S+W + N+ L + Q P
Sbjct: 119 TINFSDW--LFDAISNQTEEIIIKISAI-TYSIWHARNKAIFENHILAYEQATIKPQNPN 175
Query: 788 VVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVA 847
+V + S ++ +R+S S+W P K N DA L G +
Sbjct: 176 IVLSSLSATSNTNTTRRRS---------NVRSRWQKPLNNILKANCDANLQVQ-GRWGLG 225
Query: 848 AIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCA 907
II N + AT + G A AE A+ + +L Y ++ E+DC V
Sbjct: 226 CIIRNADGEAKVTATWCINGFDCAATAETYAILAAM-YLAKDYGFKNMEFESDCEAVIKK 284
Query: 908 MR-NSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAYVLA 952
++ S D + G ++SE + T +I R N +A+ LA
Sbjct: 285 LKLKSDDDRTYLGSILSEIWMASGWFDTCTYHFIPRIGNQVAHGLA 330
>IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
3891819-3892634 H EGN_Mt090430 20090702
Length = 213
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%)
Query: 293 RLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVTYEAASGQAVNRQKSDIF 352
+L G + P +S LLFAD ++ F + ++A +KNI+ EAASG+ +N K I
Sbjct: 95 KLHGIHICHKTPPISYLLFADDNVHFCKTFVSEAPCLKNIISDIEAASGKTINFDKLGIS 154
Query: 353 FSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIF 395
FS N S N++ + GV + G YLGLPS++ + IF
Sbjct: 155 FSKNISRNVVNSISSLLGVNESIGGGEYLGLPSMVRHSNKIIF 197
>IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40668899-40668561 H
EGN_Mt090430 20090702
Length = 112
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 46/79 (58%)
Query: 273 LFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNI 332
LFI+CAEGLS L K + G + G +V R AP L++LLF D F A+ +A +
Sbjct: 24 LFIICAEGLSVLLKKLEARGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEA 83
Query: 333 LVTYEAASGQAVNRQKSDI 351
L YE AS Q +N QKS I
Sbjct: 84 LKKYEEASRQPINLQKSKI 102
>IMGA|Medtr3g043440.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 11780720-11779218 H
EGN_Mt090430 20090702
Length = 425
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 21/272 (7%)
Query: 418 GKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGG-----KMRWLSWERLCVA 472
G+ L+K++ Q++ C+S + V + +++R M ++ W G K+ +SW ++C+
Sbjct: 3 GRVQLVKSLIQSMLLHCISVYSFPVKLTKDIERWMRNFVWSGDVNQRKLVTVSWHKVCLP 62
Query: 473 KEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFV 532
+E GLG R L N K LH +N + +S + S V
Sbjct: 63 LKEGGLGIRSLSKINEGANLKLCRELLH-SNYQWAHFLRSRVLKKKKPISYHIF---SSV 118
Query: 533 WRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRD--NEFWVHLPILPGFEHIRVSDLI 590
W GI + + W + DG +IN WT W + EF I PG S +
Sbjct: 119 WSGIKHKYTEVLANSSWNLGDGANINFWTDSWCGKPLVEEF----SIDPGLHDNLSSTVN 174
Query: 591 LTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVAS 650
L W +P P+I I+ + + +DD ++ + +G K + S
Sbjct: 175 LFIEDAKWKIPQSLLQNFPNIQNIVEKVIIPVIAKDDEMLSKLSSNGELCFKDAYLFHCS 234
Query: 651 LYVDIEDAWRSSFWKALWSMKIPPKVRHFLWR 682
+I AW K +W+ IPP +WR
Sbjct: 235 HGQNI--AWA----KIIWNKCIPPSKSMMMWR 260
>IMGA|Medtr3g030670.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 8366792-8365192 H
EGN_Mt090430 20090702
Length = 216
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 9/177 (5%)
Query: 788 VVTRAKSMLTSWKKAQR-KSPGSGTGTGDPAGS------QWFSPPVGTFKINFDATLLSS 840
VV RA+ +L W+ AQ +S + P +W P G +K N DA+ S
Sbjct: 17 VVERARHLLEDWRTAQEVRSHKANDNHAQPNSVIHGHVIEWTKPVYGRYKCNIDASFSDS 76
Query: 841 VGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETD 900
+ + I + F A T V EA L T L W+ + + + D
Sbjct: 77 LNMVGIGICICDDQGKFDMAKTDCFSPLCDVDVGEAVGLHTALQWVADLHYD-HVDFVLD 135
Query: 901 CLQVYCAMRNSVQDWSEFGVVISECKLLL-VQLPNVTLAWIRRQANDIAYVLAKSVP 956
V +++ D SE G +I C+ L N + + RRQAN++AY L + P
Sbjct: 136 SKYVVERFNSNLVDSSELGCIIQACRQLFDCNFQNSHVEFNRRQANEVAYELVRVAP 192
>IMGA|Medtr7g105970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 24393992-24396620 H
EGN_Mt090430 20090702
Length = 287
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 764 MGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFS 823
M LWS+W N W+ V+ V RA+ L W Q + T D + W
Sbjct: 75 MTLWSLWKCRNSKLWDNVDTPSLVVCNRARDTLYEWSYMQHANNLVQEITHD---ALWEK 131
Query: 824 PPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVL 883
PP+ K N + L ++ + F+ ++ +P+ AEA L +
Sbjct: 132 PPLTVVKCNVECALFNNNSIMGYGLCFRDSMGHFLPGMSNYEFLRVTPSEAEATGLLEAV 191
Query: 884 SWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQ 943
L + ++DC V A+ +SV +E G +I CK LL N ++ ++RRQ
Sbjct: 192 K-LAIARGMQSVIFKSDCKIVVDAVNSSVNPHNELGDIIFYCKQLLSLHANFSVRFVRRQ 250
Query: 944 ANDIAYVLAKS 954
AN +A+ +A++
Sbjct: 251 ANKVAHNIARA 261
>IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5450314-5449526 H EGN_Mt090430 20090702
Length = 117
Score = 65.9 bits (159), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 625 QDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCC 684
++D LIW +G YS+K+ +R+ D +R W ++W +K+PPKV++ LWR C
Sbjct: 8 EEDQLIWRLEKNGQYSVKTAYRLCMENIADNSHLYRIENWGSIWKLKVPPKVKNLLWRIC 67
Query: 685 RDILLVKATLARMGL 699
RD L +A L G+
Sbjct: 68 RDCLPTQARLLDKGV 82
>IMGA|Medtr7g071100.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr07_pseudomolecule_IMGAG_V3
14556413-14557503 E EGN_Mt090430 20090702
Length = 227
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 74/198 (37%), Gaps = 13/198 (6%)
Query: 760 ENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGS 819
E FVM +WS+W N W Q E VV RA+ +L W+ AQ TG
Sbjct: 18 ELFVMIMWSLWKRRNLKLWQQQNETRMHVVERARHLLDDWRTAQEVRSHKATGIPAQPNI 77
Query: 820 QWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQAL 879
P + K + + I + + FV A V E L
Sbjct: 78 VIHGPVIEWTKPTY-----------GIGICICDVHGEFVMAKIDCFSPLCDVDVGEVVGL 126
Query: 880 RTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLL-VQLPNVTLA 938
L W+ + + + D V +++ D SE G +I C+ L N +
Sbjct: 127 HMALQWVADLHYD-HVNFVLDSKSVVVHFNSNLGDSSELGCIIQVCRQLFDCNFQNSHIE 185
Query: 939 WIRRQANDIAYVLAKSVP 956
+ RRQAN +A+ L + P
Sbjct: 186 FNRRQANGVAHELDRVDP 203
>IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
32701852-32701244 H EGN_Mt090430 20090702
Length = 202
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 615 ITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPP 674
I +PL + D +IW+ + +G Y++KS +++ S+ + S WK +WS+ + P
Sbjct: 9 ICRLPLHSRTHSDTIIWNASPNGSYTIKSAYKMCVSISDQRSNYHVSGDWKLIWSLCVAP 68
Query: 675 KVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSFCWQLFGI 733
K++HF WR R L ++ L G+ + C E + + C + CW+ +
Sbjct: 69 KIKHFCWRLLRGCLPTRSNLQSCGVHCQSTCVVCNRDLEDEMHMFMHCKFATDCWKAANL 128
Query: 734 QLTIGNFST----FLQLLEHLHKVWENAFFENFVMGLWSVWLS 772
I ++ T F ++ + + E FV L S+W +
Sbjct: 129 WSKIASYMTSNGSFSSIMFAILRSLEVDNHVGFVAILRSIWCA 171
>IMGA|Medtr3g103220.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
25344775-25343668 H EGN_Mt090430 20090702
Length = 206
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 35/139 (25%)
Query: 433 FCMSSFLISVSILVELQRLMNSYWWGGK------MRWLSWERLCVAKEEXGLGFRHLRSF 486
+CMS FL+ +I E++ +M S++WG K + L W+ + K+ GL FR L +
Sbjct: 34 YCMSVFLLPTTIREEIEHVMKSFYWGLKKNGGRSINRLKWDNMTPCKDHGGLKFRDLEGY 93
Query: 487 NLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICSG 546
NLA+L K+ + L SL P+ ++
Sbjct: 94 NLAMLVKQKLKLLTKFPSL------LTKAPNAKYIFKN---------------------- 125
Query: 547 FRWRIEDGQSINVWTKPWL 565
RWRI DG +INVWT PW+
Sbjct: 126 -RWRIGDGNNINVWTYPWI 143
>IMGA|Medtr4g033120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
8119740-8120808 H EGN_Mt090430 20090702
Length = 303
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 107/284 (37%), Gaps = 27/284 (9%)
Query: 676 VRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSFCWQ----L 730
V++ +WR CR + +A L G+ + C + E L +CPR WQ L
Sbjct: 14 VKNLVWRVCRGCIPTRARLLDKGVNCSSLCVMCEESYEDASHVLFDCPRARKVWQDSLLL 73
Query: 731 FGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVT 790
+ + +T + + L + + E F LWS+W S N W Q T
Sbjct: 74 SKVNSVMWCNNTAAEFIFALLQELSHDQAELFASVLWSLWKSRNLRLW--------QNST 125
Query: 791 RAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVAAII 850
+ T+ +AQ S W P K N D + ++ I
Sbjct: 126 AVQQTETATSRAQ------------AVQSFWQKPAHCRLKCNVDVSFSEALNCVGFGFCI 173
Query: 851 SNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRN 910
N + A T + V EA L + W+ L I E D +V N
Sbjct: 174 RNEFGNLIKAKTMWSNPVFASDVGEALGLSNAIRWV-HELQLLNINFELDAKKVVDYFNN 232
Query: 911 SVQDWSEFGVVISECKLLL-VQLPNVTLAWIRRQANDIAYVLAK 953
D SEFG ++ EC+ N + + RRQAN++A+ LA+
Sbjct: 233 GSNDISEFGSIVEECRRSHNFYFANSKVEFSRRQANEVAHTLAQ 276
>IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related
chr08_pseudomolecule_IMGAG_V3 30299266-30298795 H
EGN_Mt090430 20090702
Length = 120
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 602 LIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRS 661
LI +F+ I +IPL+ + D +WHW +G +S++S H ++ VD + +
Sbjct: 17 LIKEIFSEFEANQILNIPLSWRLPSDKRVWHWERNGNFSVRSAHHLIKD--VDARNTLEA 74
Query: 662 S------FWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGL 699
S WKA+W +K P V++FL R RDIL + L R GL
Sbjct: 75 SSTNGQEIWKAVWRIKAPHSVKNFLRRLTRDILPARCRLKRKGL 118
>IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
25622719-25621333 H EGN_Mt090430 20090702
Length = 441
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 20/223 (8%)
Query: 519 NFLSAGVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPIL 578
N L A S +W I A+D + GF WR+ S + W+ P W L IL
Sbjct: 22 NTLLASARPSVSVIWSSILHARDVLKDGFSWRVGSDNS-SFWSCP--------WSSLGIL 72
Query: 579 PGF-EHIRVSDLILT-HGARAWNLPLIHGLFN---PSIVEIITSIPLATNVQ-DDILIWH 632
+I + DL LT + N P + L+ P + I +I N +D IWH
Sbjct: 73 GRIPPYIDIHDLQLTVKDVISSNNPHTNILYTQLPPFAADTINNIHFKFNASVEDTFIWH 132
Query: 633 WTDSGIYSMKSGHRIVASL--YVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLV 690
+G Y+ KSG+ + S V I + S W +W + +P K++ F W C + +
Sbjct: 133 NNKNGTYTPKSGYSWLLSRKELVIISNPPPSCSW--IWKLHMPEKIKLFFWLACHNSVPT 190
Query: 691 KATLARMGLELDTGCDYYG-TTETLVRALVECPRVSFCWQLFG 732
+ L + C G ET + + +C WQ G
Sbjct: 191 LSMLNHRNIAPSPVCSRCGLHDETFLHCVRDCAHSKSIWQRIG 233
>IMGA|Medtr5g025230.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
10087747-10088046 H EGN_Mt090430 20090702
Length = 99
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 486 FNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAKDAICS 545
FN ALLGK+ WR + NTNS+ P NF+ + +G PS+ WR + AKD I
Sbjct: 15 FNKALLGKQCWRLITNTNSIIAKVFKSRYFPRSNFMESTIGYQPSYSWRSMFNAKDFIDL 74
Query: 546 GFRWRIEDGQ 555
G R I +GQ
Sbjct: 75 GARSSIGNGQ 84
>IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
17349249-17348078 H EGN_Mt090430 20090702
Length = 340
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 51/333 (15%)
Query: 643 SGHRIVASLYVDIEDAWRSS-----FWKALWSMKIPPKVRHFLWRCCRDILLVKATLARM 697
SG++ +AS + A +S WK LW++K P+ ++FLWR + L +++ L +
Sbjct: 9 SGYQAIASWKTNSNQAPTTSNQDTTIWKKLWALKTIPRHKNFLWRVINNSLPLRSELGKR 68
Query: 698 GLELDTGCDYYGTT-ETLVRALVECPRVSFCWQLFGIQLTIG-------NFSTFLQL-LE 748
G++ C + + E + A + C ++ W FG QL I NFS ++ +E
Sbjct: 69 GIQCSPLCPHCNSKIEDINHAFMTCSYITRVW--FGSQLNINIDKSPITNFSDWISYAIE 126
Query: 749 HLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPG 808
H E + +W N+ + ++ RA + + + +A
Sbjct: 127 HN----EPDITIQIADLTYHIWFDRNQRVFEDKRIPEEDIIHRAANSIHDFHEAHLPQNA 182
Query: 809 -------SGTGTGDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAA 861
SG + + W P K+N DA L G I+ N G V AA
Sbjct: 183 KATLACYSGYSSKPKRVTTWKKPTDNLVKMNSDANLQVDGWWG--LGTIARDNKGLVLAA 240
Query: 862 TSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRN-SVQDWSEFGV 920
+W + E D +++ ++N +D FG
Sbjct: 241 A---------------------TWFALDCGFRRTLFEGDNEKIFKRIQNVENEDRLYFGF 279
Query: 921 VISECKLLLVQLPNVTLAWIRRQANDIAYVLAK 953
+I E ++L + +I R+AN + +A+
Sbjct: 280 LIKEIQILQSRFNTCQCNFIHREANSTTHSMAR 312
>IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16025455-16024014 E EGN_Mt090430 20090702
Length = 70
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 261 RGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFE 320
R LRQ PLSP+LFI+CAEGLS L +++ + G AP + +LLFAD FF+
Sbjct: 7 RSLRQADPLSPHLFIICAEGLSSLIREAEVGEIISGTSTCSGAPLVFHLLFADDCFLFFK 66
Query: 321 A 321
A
Sbjct: 67 A 67
>IMGA|Medtr3g127630.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 32416044-32415535 H
EGN_Mt090430 20090702
Length = 169
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Query: 824 PPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVL 883
P G +K N DA+ S+ + I + FV A T V EA L T L
Sbjct: 13 PVYGRYKCNIDASFSDSLNMIGIGICIRDDQGDFVMAKTDCFSPLCDVDVGEAVGLHTTL 72
Query: 884 SWLLS-GYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISEC-KLLLVQLPNVTLAWIR 941
W+ Y N+ + DC V +++ D SE G +I C KL N + R
Sbjct: 73 QWVADLHYDNVDFVL--DCKSVVEHFNSNLGDSSELGCIIQACRKLFDCNFQNSHAEFNR 130
Query: 942 RQANDIAYVLAKSVP 956
RQAN +A+ LA+ P
Sbjct: 131 RQANGVAHELARVAP 145
>IMGA|Medtr8g079170.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 16416556-16417454 E
EGN_Mt090430 20090702
Length = 288
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 89/252 (35%), Gaps = 37/252 (14%)
Query: 721 CPRVSFCWQLFGI-----------QLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSV 769
CP W+L G+ IG L +L +V F +WS+
Sbjct: 8 CPFAIQVWRLSGLWSDVSAANSNADSDIGTVFALLDMLTTEQRV-------VFAATVWSL 60
Query: 770 WLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQ--------- 820
W N W V E VV RA+ M+T W+ A K+ +Q
Sbjct: 61 WKHRNLKVWEGVTEVVAVVVDRARVMITKWQIANTKTSAESRAATAAPPTQLLSNSAEVN 120
Query: 821 --------WFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPA 872
W P G +K N DA S+ + I + FV A +S
Sbjct: 121 SSDDGLVLWQKPTSGRYKCNVDAAFSSNFNRTGIGICIRDEEGAFVLAKMTSFPCLDQVT 180
Query: 873 VAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQ- 931
V EA L L W LS S I E D A R+S D S+FG VI+ CK L
Sbjct: 181 VGEAMGLFEALQW-LSDMSLDNIDFELDSKITCDAFRSSKDDVSKFGHVIASCKALFSAF 239
Query: 932 LPNVTLAWIRRQ 943
N + RRQ
Sbjct: 240 FINFRTEFTRRQ 251
>IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
18011505-18012272 H EGN_Mt090430 20090702
Length = 179
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 627 DILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRD 686
++LIW+ +G YS++S +RI + D S W +K+PPKV++F+WR R
Sbjct: 40 NMLIWNTEKNGNYSVRSAYRICVTKIADNTHLHVSVDGNLSWKLKVPPKVKNFVWRVRRG 99
Query: 687 ILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSFCWQLFGIQLTI---GNFST 742
+A L+ G+ C + E + LVECP+V W+ + TI S
Sbjct: 100 CFPTRARLSSGGVAYPIDCVTCDSNYEDSIHVLVECPKVVQVWRNVNMWDTIIKNEQRSQ 159
Query: 743 FLQLLEHLHKVWE 755
+Q HL W
Sbjct: 160 IVQRATHLLDDWR 172
>IMGA|Medtr5g088720.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
34428163-34428811 H EGN_Mt090430 20090702
Length = 184
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 26/177 (14%)
Query: 778 WNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATL 837
W Q + QVV RAK++L +K + G+ G +W G + +N DA+
Sbjct: 6 WQQQNKTISQVVDRAKNLLDDCEKQK-------VGSSISHGVEWMKATYGRYNLNIDASF 58
Query: 838 LSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQI 897
S + + +S+ FV L T L WL + + +
Sbjct: 59 SSFLNMVGIGICLSDYLGEFVVG------------------LHTTLKWLADLHYDYNVDF 100
Query: 898 ETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQ-LPNVTLAWIRRQANDIAYVLAK 953
D + +++ ++ SE G VI C+ L V N + + RRQ N++A+ LA+
Sbjct: 101 AMDSKTIVYPFKSNAENNSELGCVIHACRQLFVNSFQNSCVEFNRRQTNEVAHELAQ 157
>IMGA|Medtr8g133770.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 31993480-31994567 H
EGN_Mt090430 20090702
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 95/260 (36%), Gaps = 23/260 (8%)
Query: 611 IVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSM 670
+V+ I PL V +D + W SG Y++K+ +++ + + +W +
Sbjct: 23 MVQAILDRPLFAEVHNDRIAWMMERSGRYTVKTDYKLAMMELLHTDQFHVEGECHRIWKV 82
Query: 671 KIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRALVECPRVSFCWQ 729
P K + LWR CR +L++ L + + C + TT E A V C V W
Sbjct: 83 NSPHKAHNLLWRICRGCVLMRLRLQSRHVLCEVLCPWCDTTVEDDWHAFVGCTVVRESWY 142
Query: 730 LFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVV 789
G+ ST LQ +V + LW +W + ++ WN +
Sbjct: 143 WAGL-------STVLQ-----SRVGTANTVGRVALLLWQIWAARKDVIWNDAHHTSTSI- 189
Query: 790 TRAKSMLTSWKKAQ--RKSPGS-----GTGTGDPAGSQWFSPPVGTFKINFDATLLSSVG 842
++ L +W++ Q K P S G S W P N DA
Sbjct: 190 --GRTTLDAWQQWQEVHKQPSSSIAQHGQNRVQANNSVWEKPRETWLNCNVDAAFHDRQH 247
Query: 843 HGAVAAIISNCNSGFVSAAT 862
+ + + F+ A T
Sbjct: 248 ITSFVCCVRDSRGQFIRAQT 267
>IMGA|Medtr1g025190.1 RNA-directed DNA polymerase, related
chr01_pseudomolecule_IMGAG_V3 6196727-6197277 H
EGN_Mt090430 20090702
Length = 142
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%)
Query: 587 SDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHR 646
S + H +WN + LFN V I IPL Q +IW T +G YS+K+ ++
Sbjct: 35 SSSLFCHETSSWNQGFLAALFNTGDVNAIMRIPLTYMEQHYTIIWRLTSNGEYSLKTAYK 94
Query: 647 IVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRD 686
+ S + + W +W + +P K++H WR D
Sbjct: 95 LCLSTILQNNQSQTLGNWSNIWKLDVPSKMKHLSWRAACD 134
>IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
14903666-14903472 H EGN_Mt090430 20090702
Length = 64
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Query: 422 LIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWW--GGK----MRWLSWERLCVAKEE 475
+IK+V Q+IP++ MS FLI SI E++++MNS+WW GG ++WLSW++L V K +
Sbjct: 1 MIKSVLQSIPTYFMSIFLIPSSIGDEIEKIMNSFWWENGGNRNKGIKWLSWDKLSVHKRD 60
Query: 476 XGL 478
G+
Sbjct: 61 GGM 63
>IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, related
chr04_pseudomolecule_IMGAG_V3 32379758-32380006 H
EGN_Mt090430 20090702
Length = 82
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 276 LCAEGLSKLFSKSKHEGRLKGCRVSRAAPQLSNLLFADGSLFFFEASWTQALEMKNILVT 335
+CA GLS L +S G + +V R AP L++LL F+ A+ +++ ++K +L
Sbjct: 1 MCAVGLSALLKESGGSGDIHDIKVCRGAPILTHLLLLMIDFLFWRANLSESTKIKEVLCY 60
Query: 336 YEAASGQAVNRQKSDIFFSS 355
Y+A SG+A+N QKS I +
Sbjct: 61 YKAVSGKAINFQKSKILVKA 80
>IMGA|Medtr5g084360.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
32117239-32118085 H EGN_Mt090430 20090702
Length = 222
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 765 GLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQR-KSPG-----SGTGTGDPAG 818
G S+W N W Q E QV+ RAK +L W +Q+ ++ G S +
Sbjct: 15 GKDSLWKRRNLKLWQQHNESSAQVLARAKQVLEDWNLSQQMRNNGMLLHSSAVTVSSSSN 74
Query: 819 SQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQA 878
+W P G FK N DA+ SS + I + GFV A T S Q S AV A
Sbjct: 75 VEWQRPNPGRFKCNMDASFSSSANKVGIGMCIRDSAGGFVQARTLSFQ--SYCAVDIALH 132
Query: 879 LRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQ-LPNVTL 937
L +V L S K+ ++ + + N D G +IS C+L+ + +
Sbjct: 133 LDSVDFCLDS-----KVAVDE-----FHEVANHATD---LGSIISHCRLMFTNYFHDSKV 179
Query: 938 AWIRRQANDIAYVLAKSV 955
+ RQAN +A+ LA +
Sbjct: 180 EYCWRQANRVAHELAHAA 197
>IMGA|Medtr5g065160.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
22744780-22746019 H EGN_Mt090430 20090702
Length = 176
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 821 WFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALR 880
W P G +K + DA+ +S+ + + + V EA L
Sbjct: 28 WKKPASGRYKCSIDASFSTSLNRVGLDMCLRD-----------------DDGVGEAVGLH 70
Query: 881 TVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLV-QLPNVTLAW 939
T L WL S + DC +V + +S++D SEFG I+ CK LLV + N + +
Sbjct: 71 TALDWL-SNQQFDNVDFVLDCKKVVDCVNSSLEDSSEFGCFITACKQLLVDKFQNTHVEF 129
Query: 940 IRRQANDIAYVLAKS 954
RRQAN +A+ LA++
Sbjct: 130 SRRQANKVAHELAQA 144
>IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873419-31873604 H EGN_Mt090430 20090702
Length = 61
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKL 284
+M+CV+S Y + +N + VGPII RGLRQG PLS YLF + AEGL L
Sbjct: 11 MMMCVSSATYSILMNFNRVGPIITGRGLRQGDPLSSYLFSMVAEGLCAL 59
>IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
38411077-38409788 H EGN_Mt090430 20090702
Length = 359
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 129/322 (40%), Gaps = 14/322 (4%)
Query: 637 GIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLAR 696
GIYS KS + + + + D+E+ + + +W +K+ ++ F+W+ C L K+ L
Sbjct: 14 GIYSTKSAYHTLLNRFHDVEN---NHNFNWIWKLKVSSNIQFFMWQICLSSLPTKSILVS 70
Query: 697 MGLELDTGCDYYGTT-ETLVRALVECPRVSFCW-QLFGIQLT-IGNFSTFLQLLEHLHKV 753
+ C + E ++ L+ C W + F L + S+ +E+ K
Sbjct: 71 RHIAPSATCPICNASEEAMIHCLLTCTIAKEVWKKCFNTSLIPPADDSSLGSWVENCFK- 129
Query: 754 WENAFFENFVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGT 813
+ F +M W W + N+ ++ ++ + +V ++ KA G+
Sbjct: 130 -NHGIFPLLIM--WKCWCARNKFIFDGIKTPFFIIVAECNALYMHTVKAFGIGGTCARGS 186
Query: 814 GDPAGSQWFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAV 873
W P G +N D + L++ G II N + G + S G S+
Sbjct: 187 EVAREVCWKRPDTGWIALNVDGSALTNPGAAGFGGIIRN-HEGRLMLGLSGSVGWSNILY 245
Query: 874 AEAQALRTVLSWLL-SGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQL 932
AE L + GY K+Q TD L+ + + + +G ++ + LL +
Sbjct: 246 AELMGLLKGMLLCWEEGYR--KVQCFTDSLKTIRLINEANTLYHLYGNEVALLRKLLQRN 303
Query: 933 PNVTLAWIRRQANDIAYVLAKS 954
V ++ I R+ N A K+
Sbjct: 304 WQVHISHIYREGNSCADWFVKT 325
>IMGA|Medtr8g070830.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 13835428-13833781 E
EGN_Mt090430 20090702
Length = 214
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 766 LWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPP 825
+WS+W N W Q E QV +S + +++ W P
Sbjct: 1 MWSLWKCRNMKLWQQQLESDSQVKQHHQSTTPQVQPFRQEE------------DVWKKPA 48
Query: 826 VGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSW 885
G +K N DA+ +S+ + + + + GFV A T V E V+ +
Sbjct: 49 PGRYKCNIDASFSTSLNWVGLGMYLRDEDGGFVLARTEWFDPLCDIDVGE------VVDF 102
Query: 886 LLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLV-QLPNVTLAWIRRQA 944
+L DC +V + +S+ D SEFG +I+ CK LLV + N + + +RQA
Sbjct: 103 VL------------DCKRVVDCVNSSLDDSSEFGCIITACKQLLVDRFQNSHVEFSKRQA 150
Query: 945 NDIAYVL 951
N IA L
Sbjct: 151 NRIAQTL 157
>IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 20356-20538 H
EGN_Mt090430 20090702
Length = 60
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 379 RYLGLPSLIGRERRHIFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSF 433
+YLGLPS++GR + F F+KD + ++ W+ K L K +EV+IK V Q IPS+
Sbjct: 5 KYLGLPSMMGRSKEATFGFIKDRIWHKINSWSSKCLFKVSREVMIKPVLQFIPSY 59
>IMGA|Medtr4g036130.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
8800455-8799179 H EGN_Mt090430 20090702
Length = 226
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 21/149 (14%)
Query: 597 AWNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIE 656
W PLI+ LF+ S + I + L V +D LIW S + +
Sbjct: 23 VWKAPLIYNLFDASTAQFILNTLLHPLVTEDKLIWKGEKSDNSHLHA------------- 69
Query: 657 DAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLV 715
W +W +K+PPKV+ LWR CR + L G+ C + E +
Sbjct: 70 ----PGCWNLIWKLKVPPKVKSILWRICRG---SRGRLNSTGVHCPLDCVHCNINYEDNM 122
Query: 716 RALVECPRVSFCWQLFGIQLTIGNFSTFL 744
L+ECP+V W+ + I + +L
Sbjct: 123 HILIECPKVIQVWRDVDLWDKIVQRAAYL 151
>IMGA|Medtr5g105670.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
42445166-42445565 H EGN_Mt090430 20090702
Length = 118
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 464 LSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSA 523
LSW+RL K G+ F+ L+ F N NSL + ++L++
Sbjct: 4 LSWKRLMPPKNFDGMRFKSLK-------------FFINPNSLLSRLFKTKYFLTSDYLTS 50
Query: 524 GVGRDPSFVWRGICAAKDAICSGFRWRIEDGQSINVWTKPWLLRDNEFWVHLPILPGFEH 583
+ + S+VWR + AK S F+W G+++++W W D+ L + F++
Sbjct: 51 SLRHNLSYVWRSVWMAKIVTQSRFKWSANIGENMSIWDLEWFEIDHHIEKSLGLHTTFKN 110
Query: 584 IRVSDLIL 591
++VSDL++
Sbjct: 111 MKVSDLMV 118
>IMGA|Medtr5g079690.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
29745277-29749144 E EGN_Mt090430 20090702
Length = 153
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 854 NSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQ 913
+ FV A T V EA L T L WL S + DC +V + +S++
Sbjct: 7 DGAFVLARTEWFAPICDIDVGEAVGLHTALDWL-SNQKFDNVDFVLDCKKVVDCVNSSLE 65
Query: 914 DWSEFGVVISECKLLLVQ-LPNVTLAWIRRQANDIAYVLAKS 954
D SEFG +I+ CK LLV N + + RRQAN +A+ LA++
Sbjct: 66 DSSEFGCIITACKQLLVDSFQNSHVEFSRRQANRVAHELAQA 107
>IMGA|Medtr4g107070.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr04_pseudomolecule_IMGAG_V3
23293240-23293037 H EGN_Mt090430 20090702
Length = 67
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 44/66 (66%), Gaps = 6/66 (9%)
Query: 435 MSSFLISVSILVELQRLMNSYWWG-GK-----MRWLSWERLCVAKEEXGLGFRHLRSFNL 488
MS F++ S++ ++++N +W+G G+ M W+SW++L + K G+GF+ L+ FN+
Sbjct: 1 MSIFILPTSLIDATEKMLNGFWYGHGRLLNMGMHWMSWDKLTIHKNHGGMGFKDLKYFNI 60
Query: 489 ALLGKR 494
A+L K+
Sbjct: 61 AMLRKQ 66
>IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt090430
20090702
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Query: 607 FNPSIVEI-------ITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAW 659
+P I+E I+++ L D LIW + IY+++S +R VD +
Sbjct: 7 LHPIIIEFFTHFRKAISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNVEYR 66
Query: 660 RSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRAL 718
W +WS+KIP +V+ FLWR R + + + G+ C + T E
Sbjct: 67 ILGEWLKMWSLKIPQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDWHVF 126
Query: 719 VECPRVSFCWQLFG----IQLTIGNFSTF 743
+ C V W+ G I T+ + ++F
Sbjct: 127 MGCEEVKTIWRTTGLWDLIAETVADAASF 155
>IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt090430
20090702
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 12/149 (8%)
Query: 607 FNPSIVEI-------ITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAW 659
+P I+E I+++ L D LIW + IY+++S +R VD +
Sbjct: 7 LHPIIIEFFTHFRKAISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNVEYR 66
Query: 660 RSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYGTT-ETLVRAL 718
W +WS+KIP +V+ FLWR R + + + G+ C + T E
Sbjct: 67 ILGEWLKMWSLKIPQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDWHVF 126
Query: 719 VECPRVSFCWQLFG----IQLTIGNFSTF 743
+ C V W+ G I T+ + ++F
Sbjct: 127 MGCEEVKTIWRTTGLWDLIAETVADAASF 155
>IMGA|Medtr8g121740.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 28314079-28312700 H
EGN_Mt090430 20090702
Length = 81
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 894 KIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAYVLAK 953
K+ IE DC V ++ + +D SEFG +++ C+ LL PN +++IRRQAN + + L +
Sbjct: 3 KVHIELDCKLVVESIGDRTKDQSEFGNILATCRDLLQHFPNFKISFIRRQANYVVHCLVR 62
Query: 954 S 954
+
Sbjct: 63 T 63
>IMGA|Medtr3g106940.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
27054842-27053784 E EGN_Mt090430 20090702
Length = 348
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 118/301 (39%), Gaps = 28/301 (9%)
Query: 664 WKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGCDYYG-TTETLVRALVECP 722
W +W++++P K + +W C++++ + L R + C G ET + + +C
Sbjct: 30 WSWIWNLQVPEKYKFLIWLACQNVVPTLSLLHRRNIAPSPTCARCGEEDETFLHCVRDCH 89
Query: 723 RVSFCWQLFGIQLTIGNFSTFLQLLEHLHKVWENAFFENFVMGLWSVWLSSNELKWNQVE 782
WQ G T +F T + ++ + F GLW VW N + N
Sbjct: 90 FSRSIWQKIG--FTCNDFFTATSAHDWFKIGMSSSLPDIFFAGLWWVWRHRNLMCLNNEN 147
Query: 783 EGPYQV---VTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQWFSPPVGTFKINFDATLL- 838
+++ + A + + S ++ S +W + +N D + L
Sbjct: 148 MSLFRLCNNIVSAAADINSAFDSEENVNHSDRFV------KWNNRNHHDHILNVDGSCLG 201
Query: 839 --SSVGHGAV----AAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSGYSN 892
S G+G + A ++ + SGF+ +T LQ AE A+ L ++ N
Sbjct: 202 TPSRTGYGDILRNSAGLLISGFSGFIPNSTDILQ-------AELTAIHQGLHMVIDLNMN 254
Query: 893 LKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQANDIAYVLA 952
+ +D L + N + + V+I K LL + N+TL R+ N A A
Sbjct: 255 -DVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLL-SVRNITLHHTLREGNQCADFFA 312
Query: 953 K 953
K
Sbjct: 313 K 313
>IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
5935308-5934228 H EGN_Mt090430 20090702
Length = 292
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 564 WLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPSIVEIITSIPLATN 623
W+ + W+ P ++ VSDLI R W++ I LF +V+ I PL +
Sbjct: 5 WIRGVHGSWIQSPQSHDVHNLHVSDLIADE-ERVWDIDKIESLFTDDMVQAILDTPLFSE 63
Query: 624 VQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRC 683
VQ+D + W +G Y++K+ +++ + + W +W++ P K R+ R
Sbjct: 64 VQNDRITWMMERNGRYTVKTDYKLTMMKLLHNDRFHVEGEWHRIWNVNSPHKARNM--RE 121
Query: 684 CRDI 687
RD+
Sbjct: 122 SRDV 125
>IMGA|Medtr3g030410.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 8224440-8223784 H
EGN_Mt090430 20090702
Length = 198
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 830 KINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVLSWLLSG 889
K N DAT + + + I + FV A L + V EA L L WL S
Sbjct: 48 KCNVDATFSNELNITGLGMCIRDERGLFVLAKAIPLPIMHAAHVGEAMVLYYALEWL-SD 106
Query: 890 YSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLL-VQLPNVTLAWIRRQANDIA 948
+ D A NS D SEFG++IS C+ L ++L N + + RRQAN++A
Sbjct: 107 MRFDNVDFALDSKTTADAFNNSRPDASEFGLIISACRSLFDLKLTNSKVKFNRRQANEVA 166
Query: 949 YVL 951
+ L
Sbjct: 167 HTL 169
>IMGA|Medtr1g065590.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
13071141-13070680 H EGN_Mt090430 20090702
Length = 153
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 598 WNLPLIHGLFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASL------ 651
WN LI N I + L + V D +IW + + Y++KS +++ SL
Sbjct: 14 WNQELIASFMNAQETFDICKVHLHSRVDHDAIIWEPSPNSAYTIKSDYKMCLSLSDQGTH 73
Query: 652 YVDIEDAWRSSFWKALWSMKIPPKVRHFLWRCCRDILLVKATLARMGLELDTGC 705
Y I+D W+ +W+M+I K++HFLW L + L G+ + C
Sbjct: 74 YQAIDD------WRLIWNMRIHQKLKHFLWTLLHYCLSICFNLQDHGVHRQSAC 121
>IMGA|Medtr8g074720.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 14929440-14928565 H
EGN_Mt090430 20090702
Length = 241
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 77/211 (36%), Gaps = 44/211 (20%)
Query: 782 EEGPYQVVTRAKSMLTSWKKAQRK-------------------SPGSGTGTGDPAGSQ-- 820
+E ++ RA+ +L +WK A RK S + T G + Q
Sbjct: 9 QETSQTILERARQLLFNWKDANRKQQQGNIAVQQHSSIAVQQHSSTAATAAGLNSAVQLI 68
Query: 821 -------------WFSPPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQG 867
W P G K N DA+ + I + F+ A T
Sbjct: 69 TDVNSAVQSTPVKWQKPAHGRLKCNVDASFSDDLNRVGFGFCIRDEGGNFIRAKTMWSNP 128
Query: 868 CSSPAVAEAQALRTVLSW----LLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVIS 923
S V EA L + W LL+ + E D +V D +EFG ++
Sbjct: 129 VCSIDVGEAMGLSHAIQWVHELLLTN-----VDFELDAKKVVDYFNRGNNDITEFGAIVE 183
Query: 924 ECKLLL-VQLPNVTLAWIRRQANDIAYVLAK 953
EC+ + N + + RRQAN++A+ LA+
Sbjct: 184 ECRRSCNLYFENSKVEFSRRQANEVAHTLAR 214
>IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
13555953-13554878 H EGN_Mt090430 20090702
Length = 318
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 236 IMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFILCAEGLSKLFSKSKHEGRLK 295
IM CV++ V VNG ERGLRQG P SP+LF++ AEGL+ + G
Sbjct: 252 IMECVSTASTSVLVNGSPTDEFKLERGLRQGDPFSPFLFLIAAEGLNVMMKALIEAGLFS 311
Query: 296 GCRVSR 301
G ++ +
Sbjct: 312 GYKLGQ 317
>IMGA|Medtr7g041090.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 10444456-10446587 H
EGN_Mt090430 20090702
Length = 182
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 860 AATSSLQGCSSPAVAEAQALRTVLSWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFG 919
AAT S +SP +AE ALR L W++S + IETD ++ + + +E
Sbjct: 47 AATHSENIRTSPLLAETLALRCCLDWMISSNHPGFVIIETDSESTVKCLQGKL-NVAELD 105
Query: 920 VVISECKLLLVQLPNVTLAWIRRQANDIAYVLAK 953
+VIS+C L LPNV +A+I R N A+ L +
Sbjct: 106 LVISDCIHFLFLLPNVIVAFISRTKNKAAHGLVE 139
>IMGA|AC235675_13.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235675.1 34455-34255 H
EGN_Mt090430 20090702
Length = 66
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Query: 452 MNSYWWGG------KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSL 505
MNS+WWG +++WLSW +L + KE G+GF+ L NLALLGK+ WR + N N L
Sbjct: 1 MNSFWWGNGGGLNKEIKWLSWSKLDL-KENGGMGFKDLYMSNLALLGKQVWRLVTNPNFL 59
>IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase
chr04_pseudomolecule_IMGAG_V3 40245955-40247247 H
EGN_Mt090430 20090702
Length = 395
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 1 RLKDANGEWISDNNXLKGMVSDYFXNLFEXGDVDLSPVVGLFSPLVSDNDNSMLLGDLSV 60
+L+ +G + + + YF LF PV+ L + VS +DN +L ++
Sbjct: 288 KLRTDDGITDTTQEDMCNVAQSYFEQLFSANAGVHEPVLDLMNKCVSIDDNIILTSPITK 347
Query: 61 DEVKLAVNQMHADKSPGMDGLNPRFYXRF 89
E++ A+ QM DKSPG +G N FY RF
Sbjct: 348 QELRQALFQMQPDKSPGPNGFNQAFYQRF 376
>IMGA|Medtr6g009380.1 hypothetical protein
chr06_pseudomolecule_IMGAG_V3 1542043-1542210 H
EGN_Mt090430 20090702
Length = 55
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 233 GDLIMLCVASVKYWVGVNGDEVGPIIPERGLRQGCPLSPYLFIL 276
+ I +C+ S+ Y + VNG+ G ++P+RGL+QG PLS YLFIL
Sbjct: 12 ANTISICMESIYYQMLVNGEREGHVVPKRGLKQGDPLSRYLFIL 55
>IMGA|Medtr1g149770.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
33129977-33130712 E EGN_Mt090430 20090702
Length = 100
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 490 LLGKRYWRFLHNTNSLXXXXXXXXXXPSRNFLSAGVGRDPSFVWRGICAAK-DAICSGFR 548
+L ++ WR + N SL P NFL+A +G +PS+ WR I + + I
Sbjct: 1 MLARQGWRIIQNEESLFGSCLKRRYFPRTNFLNATLGYNPSYTWRSILQDRMEVIDHVGL 60
Query: 549 WRIEDGQSINVWTKPWL 565
WR+ DG+S +W WL
Sbjct: 61 WRVGDGKSTKIWGDNWL 77
>IMGA|Medtr3g013410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
2559713-2560955 H EGN_Mt090430 20090702
Length = 176
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 460 KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSLXXXXXXXXXXPSRN 519
K+ W+ W+ +C+++EE GLG R LR FN+ LL K WR L + L
Sbjct: 47 KIAWVDWDSICLSREEGGLGVRKLREFNVELLRKWCWRMLVDKEGLWYLVLKARYGEEGG 106
Query: 520 FLSAGVGRDPSFVWRGICAAKDAI 543
L G GRD S WR + + + +
Sbjct: 107 RLKEG-GRDSSTWWRMVSSIRHGV 129
>IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
24503551-24503384 H EGN_Mt090430 20090702
Length = 55
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 394 IFSFLKDXVRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSIL 445
IF++++D + K + W+ K L KAG+E+LIK V Q +P++ MS FL+ +S L
Sbjct: 4 IFNYVRDRIWKRIESWHGKHLFKAGREILIKFVVQLVPAYQMSIFLLLMSTL 55
>IMGA|Medtr4g073720.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
14694530-14694010 H EGN_Mt090430 20090702
Length = 116
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 606 LFNPSIVEIITSIPLATNVQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWK 665
L++ ++ +I + N D IL++ W SMKS +R+ VD+ D +W
Sbjct: 20 LYDFTVHSLINTTHKQWNA-DLILLFFW------SMKSAYRLCMEKLVDVSDLRHPGYWG 72
Query: 666 ALWSMKIPPKVRHFLWRCCRDILLVKATL 694
+W +K+PP +++F+W C+ L + L
Sbjct: 73 GIWKLKVPPNIKNFIWHMCQGFLSTRVWL 101
>IMGA|Medtr5g084580.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
32212318-32210868 H EGN_Mt090430 20090702
Length = 201
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 402 VRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWWGGK- 460
VR ++ W LS AG+ L K+V +A+P++ M S I + L + Q++ ++ WG
Sbjct: 26 VRNKLASWKASHLSFAGRVNLAKSVIEAVPTYPMMSCAIPKACLQDSQKVQKAFIWGDND 85
Query: 461 ----MRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTNSL 505
+ ++W + K GLG R L N A L K W+ NS
Sbjct: 86 FQKHVHAVNWSTMTKPKRCGGLGIRRLEEMNEACLLKLGWKLRRGKNSF 134
>IMGA|Medtr5g100090.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
40059016-40059320 H EGN_Mt090430 20090702
Length = 74
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 624 VQDDILIWHWTDSGIYSMKSGHRIVASLYVDIEDAWRSSFWKALWSMKIPPKVRHFLWRC 683
V DD LI YS+KS + + VDI R FW +W + IPPK+++ +W+
Sbjct: 4 VLDDKLIRKVEKDVKYSVKSVYMLCMEGLVDISHLQRPCFWSDIWHLNIPPKLKNLVWQM 63
Query: 684 CRDILLVKATL 694
CR L + L
Sbjct: 64 CRRCLPTRVCL 74
>IMGA|Medtr3g157320.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 41458916-41459158 H
EGN_Mt090430 20090702
Length = 80
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 551 IEDGQSINVWTKPWLLRDNEFWVHLPILPGFEHIRVSDLILTHGARAWNLPLIHGLFNPS 610
I DG I++W W+ + H ++V+D +L H + WNLP + +F+
Sbjct: 2 IGDGDDISIWYNKWIANEVTLIAHANEDFPLADLKVTDCML-HDRKEWNLPFLQSIFDHQ 60
Query: 611 IVEIITSIPLATNVQDDILI 630
+VE I + PL +V +D LI
Sbjct: 61 VVENIVNTPLYPSVTEDQLI 80
>IMGA|Medtr1g064980.1 RNA-directed DNA polymerase ; Ribonuclease H,
related chr01_pseudomolecule_IMGAG_V3 12753081-12752276
H EGN_Mt090430 20090702
Length = 137
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 342 QAVNRQKSDIFFSSNTSELNKNAVKGIFGVIAPLNYGRYLGLPSLIGRERRHIFSFLKDX 401
++VNRQK F E+ + + G Y G P + GR R++++ + D
Sbjct: 9 KSVNRQKKSWFKGDRKYEIQDISTNKFVA-----DLGHYPGFPLVKGRVSRYVYNDVVDK 63
Query: 402 VRKLVSGWNQKLLSKAGKEVLIKAVAQAIPSFCMSSFLISVSILVELQRLMNSYWW 457
V K ++ W +L+K G+ L+K+V I + + + + +L ++ S+ W
Sbjct: 64 VSKWLAAWKGTILNKVGQAYLVKSVTTTISVYTIQLHNLPTHVCKKLDKMARSFLW 119
>IMGA|Medtr2g129530.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
31333511-31334185 H EGN_Mt090430 20090702
Length = 122
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 9/58 (15%)
Query: 452 MNSYWWGG------KMRWLSWERLCVAKEEXGLGFRHLRSFNLALLGKRYWRFLHNTN 503
MNS+WWG +++WLSW +L + KE G+GF+ L NLALLGK+ WR +N+N
Sbjct: 1 MNSFWWGNGGGLNKEIKWLSWSKLDL-KENGGMGFKDLYMSNLALLGKQVWR--NNSN 55
>IMGA|Medtr1g066070.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 13324431-13324150 H
EGN_Mt090430 20090702
Length = 93
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 32/76 (42%)
Query: 762 FVMGLWSVWLSSNELKWNQVEEGPYQVVTRAKSMLTSWKKAQRKSPGSGTGTGDPAGSQW 821
VM +WS+W + N + WN P QV A S+ W A S S D + W
Sbjct: 15 MVMVIWSLWYNQNNIIWNNKRSTPSQVDMMANSLWDDWWLANCISENSSDNRSDNSIQSW 74
Query: 822 FSPPVGTFKINFDATL 837
PP G K N D +
Sbjct: 75 VKPPEGWLKCNVDESF 90
>IMGA|Medtr5g083400.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 31656822-31656319 H
EGN_Mt090430 20090702
Length = 167
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 824 PPVGTFKINFDATLLSSVGHGAVAAIISNCNSGFVSAATSSLQGCSSPAVAEAQALRTVL 883
P G +K+N DA + G ++AI+ + V A + +AEA ++ +
Sbjct: 4 PSTGWYKLNTDAVGQNEDGTWGLSAIVRDSEGVVVPATCWRTPILPNSDMAEAMTMKKGM 63
Query: 884 SWLLSGYSNLKIQIETDCLQVYCAMRNSVQDWSEFGVVISECKLLLVQLPNVTLAWIRRQ 943
+ LK+ IE+D V A ++ S ++ +C+LL N+ IRR+
Sbjct: 64 EFA-KDMLFLKVIIESDSQNVISAFTDAQSLLSYMCTIVDDCRLLACHFQNLQFVHIRRE 122
Query: 944 ANDIAYVLAK 953
AN +A+ LAK
Sbjct: 123 ANQVAHYLAK 132