Jatropha Genome Database
- JcSR000334f.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcSR000334f.10 - phase: 1 /partial
(628 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00700 1126 0.0
KJC_c00513 151 2e-36
>KJC_c00700
Length = 1053
Score = 1126 bits (568), Expect = 0.0
Identities = 601/608 (98%), Gaps = 3/608 (0%)
Strand = Plus / Minus
Query: 1 aactgagatcaaagatatggattgggaaagcactttctcctttcgccatcttcctcagtc 60
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 763 aactgagatcaaagatatggattgggaaagcactttcttccttcgccatcttcctcagtc 704
Query: 61 aaacattgctgaaatttcccgatctcgatgatgaatacaggaaggtgatgaaggaatttg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aaacattgctgaaatt-cccgatctcgatgatgaatacaggaaggtgatgaaggaatttg 645
Query: 121 cagcccagttagagaaactggcagaggagttgctagatttgctgtgtgagaatcttggtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cagcccagttagagaaactggcagaggagttgctagatttgctgtgtgagaatcttggtc 585
Query: 181 ttgagaaagggtacctaaagaaggcgttttatgggtcaagtggatcgccaacctttggga 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 584 ttgagaaagggtacctaaagaaggcgttttacgggtcaagtggatcgccaacctttggga 525
Query: 241 caaaggttagcaactatccaccatgccctaaaccagacttgatcaaaggactcagggccc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 caaaggttagcaactacccaccatgccctaaaccagacttgatcaaaggactcagggccc 465
Query: 301 acacagatgcaggtggcatcatcttgttgtttcaagatgataaggtcagtggccttcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 acacagatgcaggtggcatcatcttgttgtttcaagatgataaggtcagtggccttcaac 405
Query: 361 tcctcaaagatggccactgggttgatgtccctccgatgcgtcactccattgtcatcaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcctcaaagatggccactgggttgatgtccctccgatgcgtcactccattgtcatcaacc 345
Query: 421 ttggagaccaaattgaggtaataacaaatgggaaatacaagagtgtagagcacagagtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttggagaccaaattgaggtaataacaaatgggaaatacaagagtgtagagcacagagtgg 285
Query: 481 tggctcaaacagatggaacaagaatgtcaatagcttcattttacaacccaggaagtgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tggctcaaacagatggaacaagaatgtcaatagcttcattttacaacccaggaagtgatg 225
Query: 541 cagtgatatatccagcaccagctttg-tggagaaagaagcagaagagaaaaaacaaa-tt 598
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 224 cagtgatatatccagcaccagctttgctggagaaagaagcagaagagaaaaaacaaattt 165
Query: 599 acccaaaa 606
||||||||
Sbjct: 164 acccaaaa 157
>KJC_c00513
Length = 1140
Score = 151 bits (76), Expect = 2e-36
Identities = 318/398 (79%), Gaps = 3/398 (0%)
Strand = Plus / Minus
Query: 159 ttgctgtgtgagaatcttggtcttgagaaagggtacctaaagaaggcgttttatgggtca 218
|||||||| ||||||||||| | ||||| |||||||| || |||| || ||||| |||
Sbjct: 700 ttgctgtgcgagaatcttggattagagaaggggtacctgaaaaaggtattctatggatca 641
Query: 219 agtggatcgccaacctttgggacaaaggttagcaactatccaccatgccctaaaccagac 278
| ||| |||||||| ||||| || || ||||||||||| |||||||| || || ||
Sbjct: 640 aaagga---ccaaccttcgggactaaagtcagcaactatcctccatgcccaaagcctgaa 584
Query: 279 ttgatcaaaggactcagggcccacacagatgcaggtggcatcatcttgttgtttcaagat 338
| || || || || ||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 583 cttataaaggggctgagggcccacacagatgcaggtggcatcattttactatttcaagac 524
Query: 339 gataaggtcagtggccttcaactcctcaaagatggccactgggttgatgtccctccgatg 398
|||||||| ||||| || || || ||||| |||||||| |||||||| || ||||| |||
Sbjct: 523 gataaggtgagtggtctccagctgctcaaggatggccaatgggttgacgtgcctcccatg 464
Query: 399 cgtcactccattgtcatcaaccttggagaccaaattgaggtaataacaaatgggaaatac 458
||||| |||||| ||||| | || |||||| ||||||| || || || |||||||||
Sbjct: 463 aaacactctattgtcgtcaacttaggcgaccaacttgaggtgatcacgaacgggaaatac 404
Query: 459 aagagtgtagagcacagagtggtggctcaaacagatggaacaagaatgtcaatagcttca 518
|||||||| |||| | ||| | ||||| | || || || |||||||| ||||| ||
Sbjct: 403 aagagtgtgatgcaccgggtgattgctcagaaggacggcacgagaatgtcgatagcatcg 344
Query: 519 ttttacaacccaggaagtgatgcagtgatatatccagc 556
|| || |||||||| || |||||||| |||||||||||
Sbjct: 343 ttctataacccagggagcgatgcagtaatatatccagc 306