Jatropha Genome Database

JcPR03AU11F.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR03AU11F.10 - phase: 1 /partial/short
         (140 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01018                                                            278   3e-75

>KJC_c01018 
          Length = 932

 Score =  278 bits (140), Expect = 3e-75
 Identities = 140/140 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgagctgtatgtgaatggagagatagttcaaagatcacccgaaagacagagaagggtgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ctgagctgtatgtgaatggagagatagttcaaagatcacccgaaagacagagaagggtgg 655

                                                                       
Query: 61  agccacaaccccaaagagcaaatgacagacccagatacaatgacagaactcgatacgttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 agccacaaccccaaagagcaaatgacagacccagatacaatgacagaactcgatacgttc 715

                               
Query: 121 gccgcagagaaaatatgagg 140
           ||||||||||||||||||||
Sbjct: 716 gccgcagagaaaatatgagg 735