Jatropha Genome Database

JcPR03AIW3S.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR03AIW3S.10 - phase: 1 /partial
         (272 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00206                                                            531   e-151

>KJC_c00206 
          Length = 2847

 Score =  531 bits (268), Expect = e-151
 Identities = 268/268 (100%)
 Strand = Plus / Minus

                                                                        
Query: 5    tatcgtttctcatcactccattttgatttttgaagctgtctccgcaagcatgtcaagtgc 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 tatcgtttctcatcactccattttgatttttgaagctgtctccgcaagcatgtcaagtgc 1132

                                                                        
Query: 65   agctgcatcaatgacttctgcagggtttcagtattttgtggatggacttacggaggatgc 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 agctgcatcaatgacttctgcagggtttcagtattttgtggatggacttacggaggatgc 1072

                                                                        
Query: 125  aatttctgattacagaaacttaacatctgcagctatgagaggtgagaacgatacctgctt 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 aatttctgattacagaaacttaacatctgcagctatgagaggtgagaacgatacctgctt 1012

                                                                        
Query: 185  gctctatgctgaccaattgaaacaaagatgtgttgatcagttcaaagaaggtagtatcgg 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 gctctatgctgaccaattgaaacaaagatgtgttgatcagttcaaagaaggtagtatcgg 952

                                        
Query: 245  tatggaacaattagctgctgttgatagt 272
            ||||||||||||||||||||||||||||
Sbjct: 951  tatggaacaattagctgctgttgatagt 924