Jatropha Genome Database

JcPR02FRRM3.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR02FRRM3.10 - phase: 1 /pseudo/partial
         (171 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_s19893                                                            145   4e-35
KJC_c01737                                                            145   4e-35

>KJC_s19893 
          Length = 325

 Score =  145 bits (73), Expect = 4e-35
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  cttgtagaaaagtttggtattgaccctaataatgcttttgcattctgggactgggttggt 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44  cttgtagaaaagtttggtattgaccctaataatgcttttgcattctgggactgggttggt 103

                        
Query: 90  gggaggtatagtg 102
           |||||||||||||
Sbjct: 104 gggaggtatagtg 116


>KJC_c01737 
          Length = 805

 Score =  145 bits (73), Expect = 4e-35
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  cttgtagaaaagtttggtattgaccctaataatgcttttgcattctgggactgggttggt 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cttgtagaaaagtttggtattgaccctaataatgcttttgcattctgggactgggttggt 404

                        
Query: 90  gggaggtatagtg 102
           |||||||||||||
Sbjct: 405 gggaggtatagtg 417