Jatropha Genome Database

JcPR01E1J32.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01E1J32.10 + phase: 0 
         (174 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01322                                                            145   4e-35
KJC_c11166                                                            115   3e-26

>KJC_c01322 
          Length = 1555

 Score =  145 bits (73), Expect = 4e-35
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                       
Query: 33  ggtttgtgtgtcaacaacaaaccgaaacttccctggccgtatgggtcacagagaggggca 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73  ggtttgtgtgtcaacaacaaaccgaaacttccctggccgtatgggtcacagagaggggca 14

                        
Query: 93  gatatatctggcc 105
           |||||||||||||
Sbjct: 13  gatatatctggcc 1


>KJC_c11166 
          Length = 207

 Score =  115 bits (58), Expect = 3e-26
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                     
Query: 117 agcagcagcatctgctttgactggttatgtcactgatccaagagagttcttacagtag 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agcagcagcatctgctttgactggttatgtcactgatccaagagagttcttacagtag 58