Jatropha Genome Database

JcPR01DAKSA.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01DAKSA.10 + phase: 0 /partial
         (201 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01773                                                            383   e-106

>KJC_c01773 
          Length = 1082

 Score =  383 bits (193), Expect = e-106
 Identities = 193/193 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaagctgacgagactttgaagccattagcaattgagttaagcttgcctcatcctgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttgaaagctgacgagactttgaagccattagcaattgagttaagcttgcctcatcctgaa 645

                                                                       
Query: 61  ggtgatcaattcggagccgttagcaaagtatgcacaccagctgaggatggtgttgaaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ggtgatcaattcggagccgttagcaaagtatgcacaccagctgaggatggtgttgaaggt 705

                                                                       
Query: 121 tctatttggctgttggctaaagcttatgtgggtgtagtcgactctggcgttcaccagctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tctatttggctgttggctaaagcttatgtgggtgtagtcgactctggcgttcaccagctt 765

                        
Query: 181 atcagtcactggt 193
           |||||||||||||
Sbjct: 766 atcagtcactggt 778