Jatropha Genome Database

JcPR01BVAYK.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcPR01BVAYK.10 + phase: 0 /partial
         (193 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05196                                                            351   4e-97

>KJC_c05196 
          Length = 571

 Score =  351 bits (177), Expect = 4e-97
 Identities = 177/177 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 caaccattaccaaagtttggtgaatgggatgtcaatgacccagcatcagctgagggattc 194

                                                                       
Query: 61  acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 acagtcatcttcaacaaggctcgcaatgagaaaaagacaggtggaaagcctgactcgcca 254

                                                                    
Query: 121 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 177
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gcaagagataactcctcattcaagcctggcagtaacactcttggaaaacctcaatct 311