Jatropha Genome Database
- JcCD0179138.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0179138.10 + phase: 1 /pseudo/partial
(585 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07735 777 0.0
KJC_c03786 410 e-114
>KJC_c07735
Length = 418
Score = 777 bits (392), Expect = 0.0
Identities = 401/403 (99%), Gaps = 1/403 (0%)
Strand = Plus / Minus
Query: 42 gggccaggtgggtttgtggtcacagaagctggctttggtgctgatattggaactgagaag 101
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gggccaggtgggtttntggtcacagaagctggctttggtgctgatattggaactgagaag 347
Query: 102 ttcatgaatattaagtgccgatatagtggtttaatgcctcagtgtgctattattgttgca 161
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 346 ttcatgaatattaagtgccgatatagtggtt-aatgcctcagtgtgctattattgttgca 288
Query: 162 acaatcagagccctgaagatgcatggtggtgggccagaagttgttgctggaaggcctctt 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 acaatcagagccctgaagatgcatggtggtgggccagaagttgttgctggaaggcctctt 228
Query: 222 gaccatgcctacacaactgagaatgtgcctttggttgaagctggttgtgtgaatctggct 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gaccatgcctacacaactgagaatgtgcctttggttgaagctggttgtgtgaatctggct 168
Query: 282 aggcatatttcaaatacaaagtcttatggggtaaatgttgttgttgctgtgaacatgttc 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aggcatatttcaaatacaaagtcttatggggtaaatgttgttgttgctgtgaacatgttc 108
Query: 342 tctactgatactgaagcagaacttagtgcagttaaaaatgcggcattggctgctggagca 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tctactgatactgaagcagaacttagtgcagttaaaaatgcggcattggctgctggagca 48
Query: 402 tatgatgctgttgtctgtacacatcatgcccatggtgggaagg 444
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 tatgatgctgttgtctgtacacatcatgcccatggtgggaagg 5
>KJC_c03786
Length = 695
Score = 410 bits (207), Expect = e-114
Identities = 207/207 (100%)
Strand = Plus / Minus
Query: 245 tgtgcctttggttgaagctggttgtgtgaatctggctaggcatatttcaaatacaaagtc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtgcctttggttgaagctggttgtgtgaatctggctaggcatatttcaaatacaaagtc 625
Query: 305 ttatggggtaaatgttgttgttgctgtgaacatgttctctactgatactgaagcagaact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttatggggtaaatgttgttgttgctgtgaacatgttctctactgatactgaagcagaact 565
Query: 365 tagtgcagttaaaaatgcggcattggctgctggagcatatgatgctgttgtctgtacaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagtgcagttaaaaatgcggcattggctgctggagcatatgatgctgttgtctgtacaca 505
Query: 425 tcatgcccatggtgggaagggagcggt 451
|||||||||||||||||||||||||||
Sbjct: 504 tcatgcccatggtgggaagggagcggt 478