Jatropha Genome Database

JcCD0139598.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0139598.10 + phase: 1 /partial
         (251 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04285                                                            498   e-141

>KJC_c04285 
          Length = 1040

 Score =  498 bits (251), Expect = e-141
 Identities = 251/251 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgattatctgctcttcatagttcgtgatgttaatgtaaatccaaaccctaatgaggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttgattatctgctcttcatagttcgtgatgttaatgtaaatccaaaccctaatgaggtag 621

                                                                       
Query: 61  ctgatatcaagtacgttaaccgagatcagttgaaggaactattaaggaaagcagatgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctgatatcaagtacgttaaccgagatcagttgaaggaactattaaggaaagcagatgctg 681

                                                                       
Query: 121 gtgaggaaggtttgaagctgtcaccatggtttagactagttgttgacaacttcttgttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtgaggaaggtttgaagctgtcaccatggtttagactagttgttgacaacttcttgttca 741

                                                                       
Query: 181 aatggtgggaacatgttgagcaggggacactcaaggatgtggttgacatgcaaacaattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aatggtgggaacatgttgagcaggggacactcaaggatgtggttgacatgcaaacaattc 801

                      
Query: 241 acaagttaact 251
           |||||||||||
Sbjct: 802 acaagttaact 812