Jatropha Genome Database

JcCD0138510.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0138510.10 + phase: 0 /pseudo/partial
         (218 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c11056                                                             64   1e-10

>KJC_c11056 
          Length = 774

 Score = 63.9 bits (32), Expect = 1e-10
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 10  aagaaagcttacgagctttctgttctctgcgatgctgaagttgcccttattatctt 65
           ||||||||| | |||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct: 140 aagaaagctgaagagctttctgttctttgcgacgctgatgttgctcttattatctt 195