Jatropha Genome Database

JcCD0135314.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0135314.10 - phase: 0 /pseudo/partial
         (221 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04044                                                            168   3e-42

>KJC_c04044 
          Length = 747

 Score =  168 bits (85), Expect = 3e-42
 Identities = 106/113 (93%)
 Strand = Plus / Minus

                                                                       
Query: 109 atggcagggcaggtgaaatgccacaagtatagtagacgacgtccgtctgagggttggaac 168
           |||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 367 atggcaggacaggtgaaatgccacaagtatagtagacgacgcccatctgaaggttggaac 308

                                                                
Query: 169 ttcacagtggaaaaaatgggagcacgagggaagcgcggaggtggtggtggttg 221
           ||||||||||| ||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 307 ttcacagtggagaaaatgggaccacgagggaagcgcgggggtggtggtggttg 255