Jatropha Genome Database

JcCD0099951.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0099951.10 - phase: 0 /partial/short
         (148 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06204                                                            280   9e-76

>KJC_c06204 
          Length = 1006

 Score =  280 bits (141), Expect = 9e-76
 Identities = 148/149 (99%), Gaps = 1/149 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcaagactgaagtcatccattcacgtt-cttttgttagtgaatgtggcattccagaggc 59
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 554 atcaagactgaagtcatccattcacgtttcttttgttagtgaatgtggcattccagaggc 613

                                                                       
Query: 60  tggcttggactatggtggattatcaaaggagtttctgactgatatatcaaaagcagcctt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tggcttggactatggtggattatcaaaggagtttctgactgatatatcaaaagcagcctt 673

                                        
Query: 120 ttctccagagtatggcctattctcccaaa 148
           |||||||||||||||||||||||||||||
Sbjct: 674 ttctccagagtatggcctattctcccaaa 702