Jatropha Genome Database

JcCD0081914.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0081914.10 + phase: 0 /partial
         (207 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02161                                                            180   8e-46

>KJC_c02161 
          Length = 1334

 Score =  180 bits (91), Expect = 8e-46
 Identities = 115/124 (92%), Gaps = 1/124 (0%)
 Strand = Plus / Minus

                                                                       
Query: 85  gtggatatatatgaatcaaggtctttcattggtggtaaagtgggttcatttgtcgataaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 gtggatatatatgaatcaaggtctttcattggtggtaaagtgggttcatttgtcgataaa 908

                                                                       
Query: 145 cgtgggaatcacattgaaatgggacttcatg-nnnnnnnggctgctacaataatctcttc 203
           ||||||||||||||||||||||||||||| |        |||||||||||||||||||||
Sbjct: 907 cgtgggaatcacattgaaatgggacttcaagttttttttggctgctacaataatctcttc 848

               
Query: 204 cgtt 207
           ||||
Sbjct: 847 cgtt 844