Jatropha Genome Database

JcCD0070323.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0070323.10 - phase: 2 /partial/short
         (143 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c12188                                                            180   6e-46

>KJC_c12188 
          Length = 877

 Score =  180 bits (91), Expect = 6e-46
 Identities = 98/99 (98%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgttgagtttgaatctgctgatgcaaagaaacaagttcgtggatcaacatctaccaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gatgttgagtttgaatctgctgatgcaaagaaacaagttcgtggatcaacatctaccaag 579

                                                  
Query: 61  agatctcgagctgcagaagttcacaacttgtcggaaagg 99
           ||||||||||||||||||||||||||| |||||||||||
Sbjct: 580 agatctcgagctgcagaagttcacaac-tgtcggaaagg 617