Jatropha Genome Database
- JcCD0070253.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0070253.10 - phase: 1 /pseudo/partial
(573 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04340 1006 0.0
KJC_c10013 96 1e-19
>KJC_c04340
Length = 725
Score = 1006 bits (507), Expect = 0.0
Identities = 565/574 (98%), Gaps = 9/574 (1%)
Strand = Plus / Plus
Query: 1 atgctgaagtcttgttatcggtatggtttagagctgcatgagaaagaagaagtggcggaa 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 atgctgaag-cttgttatcggtatggtttagagctgcatgagaaagaagaagtggcggaa 108
Query: 61 gaaattgcacggttaaagagtgcggtcagtgccttatctgaggrcaaagaaaagctctaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 109 gaaattgcacggttaaagagtgcggtcagtgccttatctgagg-caaagaaaagctctaa 167
Query: 121 gggggctgcagcacagcttctagaagcaattagcaagcttgaatccaatatcaatcgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gggggctgcagcacagcttctagaagcaattagcaagcttgaatccaatatcaatcgcaa 227
Query: 181 tttggatagggctgtgaaaggaaaatgatagggtgtacctcatgagggttccttctccaa 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 tttggatagggctgtgaa-ggaaaatgatagggtgtacctcatgagggttccttctccaa 286
Query: 241 gttccttgcctcctcttccagcattttctatggtaaagccgatggcaatgaatgaggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gttccttgcctcctcttccagcattttctatggtaaagccgatggcaatgaatgaggtat 346
Query: 301 tagatgcaagcaaggaaaagatgttcgcaagtcttgttccagacagtagtgcaaaagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tagatgcaagcaaggaaaagatgttcgcaagtcttgttccagacagtagtgcaaaagctc 406
Query: 361 tttcaaggtatactgagatggttgatgaagttataaggacacaagctgagaaattacagc 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 407 tttcaaggtatactgagatggttgatgaagttataaggacacaagctgag-aattacagc 465
Query: 421 aagccagtgagctaactcgagtgaggctcaaggaaatggacctgcca-gaatcaattctt 479
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 466 aagccagtgagctaactcgagtgaggctcaaggaaatggacctgccacgaatcaattctt 525
Query: 480 gctttggaaggaaattttacgcttccagcagatcttaaggaagatgtggaggcagtgcag 539
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gctttg--agg-aattttacgcttccagcagatcttaaggaagatgtggaggcagtgcag 582
Query: 540 attagtgggggaccagctggcctggaagctgaat 573
|||||| |||||||||||||||||||||||||||
Sbjct: 583 attagt-ggggaccagctggcctggaagctgaat 615
>KJC_c10013
Length = 628
Score = 95.8 bits (48), Expect = 1e-19
Identities = 55/56 (98%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 1 atgctgaagtcttgttatcggtatggtttagagctgcatgagaaagaagaagtggc 56
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atgctgaag-cttgttatcggtatggtttagagctgcatgagaaagaagaagtggc 628