Jatropha Genome Database

JcCD0058471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0058471.10 - phase: 1 /partial
         (173 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05692                                                            339   1e-93

>KJC_c05692 
          Length = 826

 Score =  339 bits (171), Expect = 1e-93
 Identities = 171/171 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggaaaagagttctttctgatgcatgggcattggatactgcccagaagccatatgcatggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggaaaagagttctttctgatgcatgggcattggatactgcccagaagccatatgcatggc 335

                                                                       
Query: 61  agcggctaaatcccgaaggtgatagaccttcggctcgaatgtatgcaacagctagtgccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agcggctaaatcccgaaggtgatagaccttcggctcgaatgtatgcaacagctagtgccc 275

                                                              
Query: 121 gttcagatggcatgtttttgctttgtggtggaagagactcctctggcatgg 171
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gttcagatggcatgtttttgctttgtggtggaagagactcctctggcatgg 224