Jatropha Genome Database
- JcCD0055831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0055831.10 + phase: 0 /partial
(263 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00082 521 e-148
KJC_c13280 396 e-110
KJC_c09540 100 3e-21
>KJC_c00082
Length = 927
Score = 521 bits (263), Expect = e-148
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 1 atggctacctctacaatggctctctcctccccttcattagccggcaaggcggtgaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggctacctctacaatggctctctcctccccttcattagccggcaaggcggtgaagctc 95
Query: 61 ggcccctctgcccctgagctcatgggcaacggccgtgttacaatgaggaaaaccgcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ggcccctctgcccctgagctcatgggcaacggccgtgttacaatgaggaaaaccgcctcc 155
Query: 121 aagaatgtttcctctggcagcccatggtacggcccagaccgtgttaagtacttgggacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aagaatgtttcctctggcagcccatggtacggcccagaccgtgttaagtacttgggacca 215
Query: 181 ttctctggtgagcccccatcctacttgaccggtgagttccctggtgactatggctgggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ttctctggtgagcccccatcctacttgaccggtgagttccctggtgactatggctgggac 275
Query: 241 actgctgggctttctgctgatcc 263
|||||||||||||||||||||||
Sbjct: 276 actgctgggctttctgctgatcc 298
>KJC_c13280
Length = 748
Score = 396 bits (200), Expect = e-110
Identities = 245/260 (94%)
Strand = Plus / Minus
Query: 1 atggctacctctacaatggctctctcctccccttcattagccggcaaggcggtgaagctc 60
|||||| ||||||||||||| || ||||| |||||| | |||||||||||||||||||||
Sbjct: 707 atggctgcctctacaatggccctttcctctccttcactcgccggcaaggcggtgaagctc 648
Query: 61 ggcccctctgcccctgagctcatgggcaacggccgtgttacaatgaggaaaaccgcctcc 120
||||| ||| | || |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 647 ggcccatctcctcccgagctcatgggcaatggccgtgtcacaatgaggaaaaccgcctcc 588
Query: 121 aagaatgtttcctctggcagcccatggtacggcccagaccgtgttaagtacttgggacca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 587 aagaatgtttcctctggcagcccatggtacggcccagaccgtgtgaagtacttgggacca 528
Query: 181 ttctctggtgagcccccatcctacttgaccggtgagttccctggtgactatggctgggac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttctctggtgagcccccatcctacttgaccggtgagttccctggtgactatggctgggat 468
Query: 241 actgctgggctttctgctga 260
|||||||| |||||||||||
Sbjct: 467 actgctggactttctgctga 448
>KJC_c09540
Length = 102
Score = 99.6 bits (50), Expect = 3e-21
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1 atggctacctctacaatggctctctcctccccttcattagccggcaaggc 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggctacctctacaatggctctctcctccccttcattagccggcaaggc 88