Jatropha Genome Database
- JcCD0055167.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCD0055167.10 + phase: 0 /partial
(987 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06964 987 0.0
KJC_c00187 96 2e-19
KJC_c07362 68 4e-11
>KJC_c06964
Length = 561
Score = 987 bits (498), Expect = 0.0
Identities = 556/565 (98%), Gaps = 9/565 (1%)
Strand = Plus / Plus
Query: 82 caaaagagccaggacaaaaggtactggagcgatctggggttttttattgttgaaggagat 141
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 caaaagagccagg-caaaaggtactggagcgatctggg--tttttattgttgaaggagat 58
Query: 142 ataaatgacatgactttattg-aaaaagctttttgatgttgtgtttt-ttacccatgtta 199
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 59 ataaatgacatgactttattgtaaaaagctttttgatgttgtgtttttttacccatgtta 118
Query: 200 tgcatttagctgctcaagctggggtgcgttatgcaatgcagaatccaaaatcttatgttc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tgcatttagctgctcaagctggggtgcgttatgcaatgcagaatccaaaatcttatgttc 178
Query: 260 atagtaatattggtgggtttgtcaatttgcttgaagtatgtaaatcagctaacccacaac 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atagtaatattggtgggtttgtcaatttgcttgaagtatgtaaatcagctaacccacaac 238
Query: 320 ctgtagttgtttgggcgtcttctagttcagtttatgggcttaattcgaaagtaccctttt 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctgtagttgtttgggcgtcttctagttcagtttatgggcttaattcgaaagtaccctttt 298
Query: 380 cagagaaagataggactgatcagcctgcgagtttatatgcagcaactaagaaagcaggag 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cagagaaagataggactgatcagcctgcgagtttatatgcagcaactaagaaagcaggag 358
Query: 440 aggaaattgctcatacttataatcatatttatggtctttcaattactgggttaaggttct 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aggaaattgctcatacttataatcatatttatggtctttcaattactgggttaaggttct 418
Query: 500 ttactgtttatggtccatggggcagacctgatatggcttatttcttttttaccaaggata 559
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 419 ttactgtttatggtccatggggcagacctgatatggcttatttc-tttttaccaaggata 477
Query: 560 ttctaaaggggaaggagattggtgtctttgaaactgctgatggaagaagtgtggctagag 619
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 478 ttctaaaggggaaggagattggtgtc-ttgaaactgctgatggaagaagtgtggctagag 536
Query: 620 -attttacttac-attgatgatatt 642
||||||||||| ||||||||||||
Sbjct: 537 tattttacttactattgatgatatt 561
>KJC_c00187
Length = 1301
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 433 gcaggagaggaaattgctcatacttataatcatatttatggtctttcaattactgggtta 492
||||| ||||||||| | || |||||||| || ||||| ||||||||||||||||||||
Sbjct: 545 gcaggtgaggaaattacccacacttataaccacatttacggtctttcaattactgggttg 486
Query: 493 aggttctttactgtttatggtccatggggcagacctgatatggcttatttct 544
|| || ||||| || || ||||||||||| ||||| |||||||| |||||||
Sbjct: 485 agattttttaccgtgtacggtccatggggaagacccgatatggcgtatttct 434
>KJC_c07362
Length = 492
Score = 67.9 bits (34), Expect = 4e-11
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 122 tttttattgttgaaggagatataaatgacatgactttattgaaaaagctttttgatgttg 181
|||| |||||||||||||| ||||| || | |||||||||| ||||| ||||| || |
Sbjct: 197 ttttcattgttgaaggagacataaacgatgtcgctttattgaagaagctctttgaagtgg 138
Query: 182 tgttttttacccatgttatgcatttagctgctcaagctgggg 223
|| |||||| ||||| |||||||| |||||||| |||||||
Sbjct: 137 tgccttttactcatgtgatgcatttggctgctcaggctgggg 96