Jatropha Genome Database

JcCD0054966.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCD0054966.10 - phase: 0 
         (291 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07070                                                            400   e-112

>KJC_c07070 
          Length = 993

 Score =  400 bits (202), Expect = e-112
 Identities = 214/217 (98%), Gaps = 2/217 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagagaggaaaggatgatgaaaagataatggggcctatgttccctaggcttcatgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgaagagaggaaaggatgatgaaaagataatggggcctatgttccctaggcttcatgtg 574

                                                                       
Query: 61  aatgacacggagaaaggagggccaagagctcctccaaggaacaagatggccctttatgag 120
           ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||
Sbjct: 575 aatgacacggagaaaggagggccaagagctcctcccag--acaagatggccctttatgag 632

                                                                       
Query: 121 cagcttagtattccttctcagaggtttaatcatgctgttttgcctcttaacccaagtaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cagcttagtattccttctcagaggtttaatcatgctgttttgcctcttaacccaagtaaa 692

                                                
Query: 181 gctagcaacttgattcctgcagcatcctcaagccagg 217
           |||||||||||||||||||||||||||||||||||||
Sbjct: 693 gctagcaacttgattcctgcagcatcctcaagccagg 729