Jatropha Genome Database

JcCB0994661.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0994661.10 + phase: 0 /pseudo/partial/short
         (146 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04995                                                            129   2e-30

>KJC_c04995 
          Length = 658

 Score =  129 bits (65), Expect = 2e-30
 Identities = 71/73 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggggtgatcctttcaatgggacaaactttgttgattgcattgaaaggttcttggcagatc 60
           |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 144 ggggtgatcctttcaatgggacaaacttcgttgattgcattgaaagattcttggcagatc 85

                        
Query: 61  cacagacagaagg 73
           |||||||||||||
Sbjct: 84  cacagacagaagg 72