Jatropha Genome Database

JcCB0971961.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0971961.10 - phase: 0 
         (417 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02166                                                            531   e-151

>KJC_c02166 
          Length = 1071

 Score =  531 bits (268), Expect = e-151
 Identities = 268/268 (100%)
 Strand = Plus / Minus

                                                                        
Query: 146  cagatcttccgccgcgaactccagtcgccggtgcccgggtccacttccccaaccccgatg 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 cagatcttccgccgcgaactccagtcgccggtgcccgggtccacttccccaaccccgatg 1012

                                                                        
Query: 206  atgcgatcgaggtctttgtcgatgggtatccggtcaaaatccctaaaggaatgacggttt 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 atgcgatcgaggtctttgtcgatgggtatccggtcaaaatccctaaaggaatgacggttt 952

                                                                        
Query: 266  tgcaagcttgtgaagtcgctggtgttgacattcctcgattttgctatcatagccgacttt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  tgcaagcttgtgaagtcgctggtgttgacattcctcgattttgctatcatagccgacttt 892

                                                                        
Query: 326  ccattgctggtaactgccgtatgtgccttgttgaggtcgagaagtctccaaagcccgttg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  ccattgctggtaactgccgtatgtgccttgttgaggtcgagaagtctccaaagcccgttg 832

                                        
Query: 386  cttcttgcgctatgcctgctctaccagg 413
            ||||||||||||||||||||||||||||
Sbjct: 831  cttcttgcgctatgcctgctctaccagg 804