Jatropha Genome Database
- JcCB0968951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0968951.10 - phase: 0
(753 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01103 1425 0.0
KJC_s14103 474 e-133
KJC_s17066 54 5e-07
KJC_c06155 54 5e-07
>KJC_c01103
Length = 923
Score = 1425 bits (719), Expect = 0.0
Identities = 719/719 (100%)
Strand = Plus / Minus
Query: 35 caactccatccttccaatttgaggattccagtggtcttcatagctacttggctgagccat 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 caactccatccttccaatttgaggattccagtggtcttcatagctacttggctgagccat 864
Query: 95 ggaccaagcgcaagcgatctaagcgttctcaccaccaacccactgaggaagagtatctag 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ggaccaagcgcaagcgatctaagcgttctcaccaccaacccactgaggaagagtatctag 804
Query: 155 ctctttgccttgttatgcttgctcgtggtaccactgcctcaacttctacctcgacctcca 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctctttgccttgttatgcttgctcgtggtaccactgcctcaacttctacctcgacctcca 744
Query: 215 ccgcctcacaccgccaccgctcccctactccatctcgacagattccagctgcgttgaaca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ccgcctcacaccgccaccgctcccctactccatctcgacagattccagctgcgttgaaca 684
Query: 275 actcagaggagaagcctagctataagtgttccgtctgtaacaaggccttttcttcttacc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 actcagaggagaagcctagctataagtgttccgtctgtaacaaggccttttcttcttacc 624
Query: 335 aagcgttaggcggtcacaaggcaagtcacaggaaactcgcaggaaacgaagaccaatcaa 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aagcgttaggcggtcacaaggcaagtcacaggaaactcgcaggaaacgaagaccaatcaa 564
Query: 395 cttcaactaccgcgaccagttccgccacagctactgtatctaacggaagcggtaagactc 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cttcaactaccgcgaccagttccgccacagctactgtatctaacggaagcggtaagactc 504
Query: 455 acgagtgctctctctgccacaagtgctttccgacaggacaggctctcggtggccacaaga 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acgagtgctctctctgccacaagtgctttccgacaggacaggctctcggtggccacaaga 444
Query: 515 ggtgtcactacgaaggcggttcagcagcggctgaaaagagtggagtaacttcagtctctg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggtgtcactacgaaggcggttcagcagcggctgaaaagagtggagtaacttcagtctctg 384
Query: 575 aaggcgttggctcaactaacactcacagtctaagccagagccaacgtgaatttgacctta 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaggcgttggctcaactaacactcacagtctaagccagagccaacgtgaatttgacctta 324
Query: 635 acctcccagccttgccggaatttgcagcggatttctttatctccggtgacgatgaagtta 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acctcccagccttgccggaatttgcagcggatttctttatctccggtgacgatgaagtta 264
Query: 695 tgagcccactgccggtgaaaaagccccgtcttttggtagcgcccaaaatcgaagtctaa 753
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgagcccactgccggtgaaaaagccccgtcttttggtagcgcccaaaatcgaagtctaa 205
>KJC_s14103
Length = 539
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 515 ggtgtcactacgaaggcggttcagcagcggctgaaaagagtggagtaacttcagtctctg 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggtgtcactacgaaggcggttcagcagcggctgaaaagagtggagtaacttcagtctctg 180
Query: 575 aaggcgttggctcaactaacactcacagtctaagccagagccaacgtgaatttgacctta 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aaggcgttggctcaactaacactcacagtctaagccagagccaacgtgaatttgacctta 120
Query: 635 acctcccagccttgccggaatttgcagcggatttctttatctccggtgacgatgaagtta 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acctcccagccttgccggaatttgcagcggatttctttatctccggtgacgatgaagtta 60
Query: 695 tgagcccactgccggtgaaaaagccccgtcttttggtagcgcccaaaatcgaagtctaa 753
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tgagcccactgccggtgaaaaagccccgtcttttggtagcgcccaaaatcgaagtctaa 1
>KJC_s17066
Length = 468
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 145 gagtatctagctctttgccttgttatgcttgctcg 179
|||||||| |||||||||||| |||||||||||||
Sbjct: 71 gagtatctcgctctttgccttattatgcttgctcg 37
>KJC_c06155
Length = 532
Score = 54.0 bits (27), Expect = 5e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 145 gagtatctagctctttgccttgttatgcttgctcg 179
|||||||| |||||||||||| |||||||||||||
Sbjct: 243 gagtatctcgctctttgccttattatgcttgctcg 209