Jatropha Genome Database

JcCB0954251.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0954251.10 - phase: 2 /partial
         (172 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_s20690                                                            200   7e-52
KJC_c04944                                                            200   7e-52

>KJC_s20690 
          Length = 273

 Score =  200 bits (101), Expect = 7e-52
 Identities = 101/101 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acggcaagagaagacagtgatgaagcttgtcgttgatgctgcgactgataaagtacttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 acggcaagagaagacagtgatgaagcttgtcgttgatgctgcgactgataaagtacttgg 155

                                                    
Query: 61  agcctccatgtgtgggccagatgctcctgaagttatacagg 101
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agcctccatgtgtgggccagatgctcctgaagttatacagg 114


>KJC_c04944 
          Length = 711

 Score =  200 bits (101), Expect = 7e-52
 Identities = 101/101 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acggcaagagaagacagtgatgaagcttgtcgttgatgctgcgactgataaagtacttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acggcaagagaagacagtgatgaagcttgtcgttgatgctgcgactgataaagtacttgg 263

                                                    
Query: 61  agcctccatgtgtgggccagatgctcctgaagttatacagg 101
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agcctccatgtgtgggccagatgctcctgaagttatacagg 222