Jatropha Genome Database

JcCB0914631.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0914631.10 + phase: 0 /partial
         (159 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01034                                                            307   4e-84

>KJC_c01034 
          Length = 1543

 Score =  307 bits (155), Expect = 4e-84
 Identities = 155/155 (100%)
 Strand = Plus / Plus

                                                                        
Query: 5    aggctaccatcgcacgtggaaatgatgcaggaccatataaaatcacagatacaatggctt 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 aggctaccatcgcacgtggaaatgatgcaggaccatataaaatcacagatacaatggctt 1273

                                                                        
Query: 65   tcatgtttgagtcatgtttaattccgagaatctgctcgtgggctgttgagtcaccgcttt 124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 tcatgtttgagtcatgtttaattccgagaatctgctcgtgggctgttgagtcaccgcttt 1333

                                               
Query: 125  tggatgctgattattaccagtgttggctcggactc 159
            |||||||||||||||||||||||||||||||||||
Sbjct: 1334 tggatgctgattattaccagtgttggctcggactc 1368