Jatropha Genome Database

JcCB0907471.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0907471.10 - phase: 2 /partial
         (256 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06451                                                            500   e-142

>KJC_c06451 
          Length = 692

 Score =  500 bits (252), Expect = e-142
 Identities = 255/256 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtggtacgcaagttgggagaagtatgttgggcagggtagtgatgatctcttggttgatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtggtacgcaagttgggagaagtatgttgggcagggtagtgatgatctcttggttgatgg 487

                                                                       
Query: 61  gcagtctcctgattctcaagattttcatgttgctccttcaggaatggctgatagacctgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gcagtctcctgattctcaagattttcatgttgctccttcaggaatggctgatagacctgg 427

                                                                       
Query: 121 tcctataaacaactccgaaatagttgaaaatggaagtggtggtgagagtgatgatctaga 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcctataaacaactccgaaaaagttgaaaatggaagtggtggtgagagtgatgatctaga 367

                                                                       
Query: 181 gcttgctagaacattgctggaaggtagggactatgttttggttccccaaaaagtttggga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcttgctagaacattgctggaaggtagggactatgttttggttccccaaaaagtttggga 307

                           
Query: 241 aaagcttgtacaatgg 256
           ||||||||||||||||
Sbjct: 306 aaagcttgtacaatgg 291