Jatropha Genome Database

JcCB0902031.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0902031.10 + phase: 0 /partial
         (669 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03594                                                            908   0.0  

>KJC_c03594 
          Length = 563

 Score =  908 bits (458), Expect = 0.0
 Identities = 458/458 (100%)
 Strand = Plus / Plus

                                                                       
Query: 212 agaaattaacttgccccttgacacaaaaagaactaaaaagtactgaactaaaccctagca 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agaaattaacttgccccttgacacaaaaagaactaaaaagtactgaactaaaccctagca 60

                                                                       
Query: 272 tagctttgcggaacaccattgaagagtggactgctaggaatgaagctgttcagctagata 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tagctttgcggaacaccattgaagagtggactgctaggaatgaagctgttcagctagata 120

                                                                       
Query: 332 tggctcggaggtcattaaatctgactaatcctgaaagtgatgttttgcaatctttgaagt 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggctcggaggtcattaaatctgactaatcctgaaagtgatgttttgcaatctttgaagt 180

                                                                       
Query: 392 atgttcagtatatctgccagaagagcagatcaaataagcatgttgtgcgcaatgctgagt 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttcagtatatctgccagaagagcagatcaaataagcatgttgtgcgcaatgctgagt 240

                                                                       
Query: 452 tgatacctatgattgttgacatgttaaagagtagcagccgccgagttcggtgtaaagcat 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatacctatgattgttgacatgttaaagagtagcagccgccgagttcggtgtaaagcat 300

                                                                       
Query: 512 tagaaactcttaaaactgtgatagaggaagatgtcgataataaggcaatattggcggaag 571
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagaaactcttaaaactgtgatagaggaagatgtcgataataaggcaatattggcggaag 360

                                                                       
Query: 572 gtgacactgtgcgaacaatagttaagttattgtcacatgagcaatccaaagaaagggagg 631
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgacactgtgcgaacaatagttaagttattgtcacatgagcaatccaaagaaagggagg 420

                                                 
Query: 632 aagctgtctcattgctgcatgagctctctaaatctgaa 669
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagctgtctcattgctgcatgagctctctaaatctgaa 458