Jatropha Genome Database

JcCB0890051.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0890051.10 - phase: 0 /partial
         (619 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07281                                                            823   0.0  

>KJC_c07281 
          Length = 581

 Score =  823 bits (415), Expect = 0.0
 Identities = 415/415 (100%)
 Strand = Plus / Minus

                                                                       
Query: 37  ggtggggaagccagttctatatggcctagtgatggtatgatgcagtctgtttcaacccaa 96
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggtggggaagccagttctatatggcctagtgatggtatgatgcagtctgtttcaacccaa 356

                                                                       
Query: 97  agcacgcttcgatgtctctctcgcatgctggatgaagccatccatgctgatgttactatc 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agcacgcttcgatgtctctctcgcatgctggatgaagccatccatgctgatgttactatc 296

                                                                       
Query: 157 cacactgctgatggcactctaagagctcataaagctatgctttctgcaagttcacctgtt 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cacactgctgatggcactctaagagctcataaagctatgctttctgcaagttcacctgtt 236

                                                                       
Query: 217 ttccagagcatgttccaccatgacctaaaggaaaaagagtcctctacgatctacatagaa 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ttccagagcatgttccaccatgacctaaaggaaaaagagtcctctacgatctacatagaa 176

                                                                       
Query: 277 gacatgtcaatggagtcttgcatgtctcttctaagttacttgtatggaaccattaaacaa 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gacatgtcaatggagtcttgcatgtctcttctaagttacttgtatggaaccattaaacaa 116

                                                                       
Query: 337 gaggatttctggaagcaccggttagcgttactcggggctgcaaacaaatatgatattgtg 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gaggatttctggaagcaccggttagcgttactcggggctgcaaacaaatatgatattgtg 56

                                                                  
Query: 397 gaccttaaaaacgcttgtgaagagagcctcttggaagacatcaattctggaaatg 451
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  gaccttaaaaacgcttgtgaagagagcctcttggaagacatcaattctggaaatg 1