Jatropha Genome Database
- JcCB0868471.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0868471.10 - phase: 0 /partial
(312 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00294 537 e-153
KJC_c19477 509 e-144
KJC_c01181 446 e-125
KJC_c00009 446 e-125
KJC_c08948 385 e-107
KJC_s20040 107 2e-23
KJC_c18450 107 2e-23
KJC_c00536 107 2e-23
KJC_c08812 100 4e-21
KJC_s18072 98 2e-20
KJC_s18298 94 2e-19
KJC_s18756 50 3e-06
>KJC_c00294
Length = 1872
Score = 537 bits (271), Expect = e-153
Identities = 301/312 (96%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaatta 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1438 gaaagaaagatagaactagatgcattcttaaaagaaagcgcttttcgatgcaaggaat-a 1496
Query: 61 atttttcgtgactttcattcnnnnnnnccgatgttagaaggtgctaaattaatcggtgcg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1497 atttttcgtgactttcatcttttttttccgatgttagaaggtgctaaattaatcggtgcg 1556
Query: 121 ggagcagctacaatcgctttggcgggagcagctgtcgggattggttctgtcttcagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1557 ggagcagctacaatcgctttggcgggagcagctgtcgggattggttctgtcttcagttct 1616
Query: 181 ttgatacattccgtggctagaaatccatccttagctaaacaattatttggttatgcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1617 ttgatacattccgtggctagaaatccatccttagctaaacaattatttggttatgcaatt 1676
Query: 241 ttgggatttgctctaaccgaagctattgcattgtttgccttaatgatggcctttttgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1677 ttgggatttgctctaaccgaagctattgcattgtttgccttaatgatggcctttttgatc 1736
Query: 301 ttgttcgtcttc 312
||||||||||||
Sbjct: 1737 ttgttcgtcttc 1748
>KJC_c19477
Length = 719
Score = 509 bits (257), Expect = e-144
Identities = 300/313 (95%), Gaps = 4/313 (1%)
Strand = Plus / Minus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaatta 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 539 gaaagaaagatagaactagatgcattcttaaaagaaagcgcttttcgatgcaagga--ta 482
Query: 61 atttttcgtgactttcat-tcnnnnnnnccgatgttagaaggtgctaaattaatcggtgc 119
|||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 481 atttttcgtgactttcatctttttttttccgatgttagaaggtgctaaattaatcggtgc 422
Query: 120 gggagcagctacaatcgctttggcgggagcagctgtcgggattggttctgtcttcagttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggagcagctacaatcgctttggcgggagcagctgtcgggattggttctgtcttcagttc 362
Query: 180 tttgatacattccgtggctagaaatccatccttagctaaacaattatttggttatgcaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgatacattccgtggctagaaatccatccttagctaaacaattatttggttatgcaat 302
Query: 240 tttgggatttgctctaaccgaagctattgcattgtttgccttaatgatggcctttttgat 299
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 301 tttgggatttgctctaaccgaagctattgca-tgtttgccttaatgatggcctttttgat 243
Query: 300 cttgttcgtcttc 312
|||||||||||||
Sbjct: 242 cttgttcgtcttc 230
>KJC_c01181
Length = 1074
Score = 446 bits (225), Expect = e-125
Identities = 225/225 (100%)
Strand = Plus / Plus
Query: 88 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 619
Query: 148 gcagctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatcca 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcagctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatcca 679
Query: 208 tccttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctatt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tccttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctatt 739
Query: 268 gcattgtttgccttaatgatggcctttttgatcttgttcgtcttc 312
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcattgtttgccttaatgatggcctttttgatcttgttcgtcttc 784
>KJC_c00009
Length = 3749
Score = 446 bits (225), Expect = e-125
Identities = 225/225 (100%)
Strand = Plus / Plus
Query: 88 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 3006
Query: 148 gcagctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatcca 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 gcagctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatcca 3066
Query: 208 tccttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctatt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 tccttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctatt 3126
Query: 268 gcattgtttgccttaatgatggcctttttgatcttgttcgtcttc 312
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 gcattgtttgccttaatgatggcctttttgatcttgttcgtcttc 3171
Score = 107 bits (54), Expect = 2e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 58
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 gaaagaaagatagaactagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 1625
>KJC_c08948
Length = 916
Score = 385 bits (194), Expect = e-107
Identities = 197/198 (99%)
Strand = Plus / Plus
Query: 88 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 460
Query: 148 gcagctgtcgggattggttctgtcttcagttctttgatacattccgtggctagaaatcca 207
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 461 gcagctgtcgggattggttctgtcttcagttctttgatacattctgtggctagaaatcca 520
Query: 208 tccttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctatt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tccttagctaaacaattatttggttatgcaattttgggatttgctctaaccgaagctatt 580
Query: 268 gcattgtttgccttaatg 285
||||||||||||||||||
Sbjct: 581 gcattgtttgccttaatg 598
>KJC_s20040
Length = 451
Score = 107 bits (54), Expect = 2e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 58
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gaaagaaagatagaactagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 61
>KJC_c18450
Length = 708
Score = 107 bits (54), Expect = 2e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 58
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gaaagaaagatagaactagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 518
>KJC_c00536
Length = 1910
Score = 107 bits (54), Expect = 2e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 58
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaagaaagatagaactagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 502
Score = 107 bits (54), Expect = 2e-23
Identities = 82/89 (92%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 88 ccgatgttagaaggtgctaaattaatcggtgcgggagcagctacaatcgctttggcggga 147
||||||||||||||||||||||||||||||| | | | ||||||||||||||||||||||
Sbjct: 1817 ccgatgttagaaggtgctaaattaatcggtgggaggg-agctacaatcgctttggcggga 1875
Query: 148 gcagctgtcggg--attggttctgtcttc 174
|||||||||||| ||||||||||||||
Sbjct: 1876 gcagctgtcgggtagttggttctgtcttc 1904
>KJC_c08812
Length = 451
Score = 99.6 bits (50), Expect = 4e-21
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 58
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 gaaagaaagataggactagatgcattcttaaaagaaagcgcttttcgatgcaaggaat 71
>KJC_s18072
Length = 97
Score = 97.6 bits (49), Expect = 2e-20
Identities = 56/57 (98%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 257 ccgaagctattgcattgtttgccttaatgatgg-cctttttgatcttgttcgtcttc 312
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 97 ccgaagctattgcattgtttgccttaatgatggtcctttttgatcttgttcgtcttc 41
>KJC_s18298
Length = 528
Score = 93.7 bits (47), Expect = 2e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 1 gaaagaaagatagaaccagatgcattcttaaaagaaagcgc-ttttcgatgcaaggaatt 59
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| | |
Sbjct: 427 gaaagaaagatagaactagatgcattcttaaaagaaagcgctttttcgatgcaaggtaat 368
Query: 60 aattttt 66
|||||||
Sbjct: 367 aattttt 361
>KJC_s18756
Length = 231
Score = 50.1 bits (25), Expect = 3e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gaaagaaagatagaaccagatgcattctt 29
|||||||||||||||| ||||||||||||
Sbjct: 155 gaaagaaagatagaactagatgcattctt 183