Jatropha Genome Database

JcCB0860891.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0860891.10 - phase: 0 /partial
         (234 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00067                                                            464   e-131
KJC_c00629                                                            432   e-121

>KJC_c00067 
          Length = 7911

 Score =  464 bits (234), Expect = e-131
 Identities = 234/234 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atcagtgagaacataaagataaaagagttttctaagtatcagatcgaccaaattgaacaa 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6579 atcagtgagaacataaagataaaagagttttctaagtatcagatcgaccaaattgaacaa 6520

                                                                        
Query: 61   atgataggtcaagatcatgttgttcattgggaattgaagaggggagaacgagcagacatc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6519 atgataggtcaagatcatgttgttcattgggaattgaagaggggagaacgagcagacatc 6460

                                                                        
Query: 121  gaaggattaatttctatttcttgttatcgtggaattcgtcatcaagatggattgccctta 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6459 gaaggattaatttctatttcttgttatcgtggaattcgtcatcaagatggattgccctta 6400

                                                                  
Query: 181  cgcggtcaacaaactcatactaatgctagaacttgtcgcaagctaattcggaaa 234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6399 cgcggtcaacaaactcatactaatgctagaacttgtcgcaagctaattcggaaa 6346


>KJC_c00629 
          Length = 958

 Score =  432 bits (218), Expect = e-121
 Identities = 218/218 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcagtgagaacataaagataaaagagttttctaagtatcagatcgaccaaattgaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atcagtgagaacataaagataaaagagttttctaagtatcagatcgaccaaattgaacaa 324

                                                                       
Query: 61  atgataggtcaagatcatgttgttcattgggaattgaagaggggagaacgagcagacatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgataggtcaagatcatgttgttcattgggaattgaagaggggagaacgagcagacatc 264

                                                                       
Query: 121 gaaggattaatttctatttcttgttatcgtggaattcgtcatcaagatggattgccctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaaggattaatttctatttcttgttatcgtggaattcgtcatcaagatggattgccctta 204

                                                 
Query: 181 cgcggtcaacaaactcatactaatgctagaacttgtcg 218
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cgcggtcaacaaactcatactaatgctagaacttgtcg 166