Jatropha Genome Database
- JcCB0843901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0843901.10 - phase: 1 /partial
(527 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00035 866 0.0
KJC_c10941 850 0.0
KJC_c01445 135 1e-31
KJC_c11239 131 2e-30
KJC_c00109 131 2e-30
KJC_c01447 125 1e-28
KJC_c04831 111 2e-24
KJC_c07464 92 2e-18
KJC_c00178 60 6e-09
>KJC_c00035
Length = 958
Score = 866 bits (437), Expect = 0.0
Identities = 437/437 (100%)
Strand = Plus / Plus
Query: 1 gtggtcatattaacccagcagtgacctttgggctgtttttagcaagaaaggtgtcactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtggtcatattaacccagcagtgacctttgggctgtttttagcaagaaaggtgtcactaa 426
Query: 61 ttcgagccttggcttacatggtggctcagtgtttaggtgccatctgtggtgtagggttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttcgagccttggcttacatggtggctcagtgtttaggtgccatctgtggtgtagggttgg 486
Query: 121 tcaaagcttttatgaagaatccatataatcatcttggtggtggtgctaactctgtaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcaaagcttttatgaagaatccatataatcatcttggtggtggtgctaactctgtaaata 546
Query: 181 ccggctatagcaaaggaactgctttgggtgctgagatcatcggcacttttgttctagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccggctatagcaaaggaactgctttgggtgctgagatcatcggcacttttgttctagtct 606
Query: 241 acactgttttctctgcaactgaccccaagagaagtgcacgtgactcacacgttcctattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 acactgttttctctgcaactgaccccaagagaagtgcacgtgactcacacgttcctattt 666
Query: 301 tggctccacttccaattgggtttgcagtttttatggttcacttggctaccatacccatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tggctccacttccaattgggtttgcagtttttatggttcacttggctaccatacccatta 726
Query: 361 ctggtactggtattaacccagcgaggagcttcggtgctgctgttatttacaacaatgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ctggtactggtattaacccagcgaggagcttcggtgctgctgttatttacaacaatgata 786
Query: 421 aagtctgggatgatcat 437
|||||||||||||||||
Sbjct: 787 aagtctgggatgatcat 803
>KJC_c10941
Length = 854
Score = 850 bits (429), Expect = 0.0
Identities = 436/437 (99%), Gaps = 1/437 (0%)
Strand = Plus / Plus
Query: 1 gtggtcatattaacccagcagtgacctttgggctgtttttagcaagaaaggtgtcactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtggtcatattaacccagcagtgacctttgggctgtttttagcaagaaaggtgtcactaa 334
Query: 61 ttcgagccttggcttacatggtggctcagtgtttaggtgccatctgtggtgtagggttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttcgagccttggcttacatggtggctcagtgtttaggtgccatctgtggtgtagggttgg 394
Query: 121 tcaaagcttttatgaagaatccatataatcatcttggtggtggtgctaactctgtaaata 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 395 tcaaagcttttatgaagaatccatataatcatcttggtg-tggtgctaactctgtaaata 453
Query: 181 ccggctatagcaaaggaactgctttgggtgctgagatcatcggcacttttgttctagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccggctatagcaaaggaactgctttgggtgctgagatcatcggcacttttgttctagtct 513
Query: 241 acactgttttctctgcaactgaccccaagagaagtgcacgtgactcacacgttcctattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 acactgttttctctgcaactgaccccaagagaagtgcacgtgactcacacgttcctattt 573
Query: 301 tggctccacttccaattgggtttgcagtttttatggttcacttggctaccatacccatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tggctccacttccaattgggtttgcagtttttatggttcacttggctaccatacccatta 633
Query: 361 ctggtactggtattaacccagcgaggagcttcggtgctgctgttatttacaacaatgata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctggtactggtattaacccagcgaggagcttcggtgctgctgttatttacaacaatgata 693
Query: 421 aagtctgggatgatcat 437
|||||||||||||||||
Sbjct: 694 aagtctgggatgatcat 710
Score = 65.9 bits (33), Expect = 9e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 74 ttacatggtggctcagtgtttaggtgccatctg 106
|||||||||||||||||||||||||||||||||
Sbjct: 852 ttacatggtggctcagtgtttaggtgccatctg 820
>KJC_c01445
Length = 814
Score = 135 bits (68), Expect = 1e-31
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 210 gctgagatcatcggcacttttgttctagtctacactgttttctctgcaactgaccccaag 269
||||||||||| ||||||||||| | |||||||| || ||||| || || || ||||||
Sbjct: 438 gctgagatcattggcacttttgtgttggtctacacagtgttctccgccacggatcccaag 497
Query: 270 agaagtgcacgtgactcacacgttcctattttggctccacttccaattgggtttgcagtt 329
|| ||||| | ||||| || || ||| |||||||||||||||||||||| ||||| ||
Sbjct: 498 aggagtgctagagactcccatgtccctgttttggctccacttccaattggatttgctgtg 557
Query: 330 tttatggttcacttggctaccatacccattactggtactggtattaacccagcgaggagc 389
|| |||||||||||||| ||||| || || || || ||||| || |||||||| |||||
Sbjct: 558 ttcatggttcacttggccaccattccaatcaccggcactggcatcaacccagctaggagt 617
Query: 390 ttcggtgctgctgttatttacaacaatgataaagtctgggatga 433
| || ||||||||||| |||||| ||||||| | |||||||||
Sbjct: 618 ctgggagctgctgttatctacaaccatgataaggcctgggatga 661
>KJC_c11239
Length = 643
Score = 131 bits (66), Expect = 2e-30
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 207 ggtgctgagatcatcggcacttttgttctagtctacactgttttctctgcaactgacccc 266
||||||||||| | ||||| |||||||| ||||||||||| ||||| || ||||| |
Sbjct: 504 ggtgctgagattgttggcacctttgttcttgtctacactgtcttctccgccactgatgct 445
Query: 267 aagagaagtgcacgtgactcacacgttcctattttggctccacttccaattgggtttgca 326
||||| || || | ||||| || || |||||||||||||| ||||| ||||||||||||
Sbjct: 444 aagaggagcgccagggactctcatgtccctattttggctcctcttcccattgggtttgca 385
Query: 327 gtttttatggttcacttggctaccatacccattactggtactggtattaacccagcgagg 386
|| || ||||||||||||| ||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 384 gtgttcttggttcacttggccaccatccccattactggaactggcattaacccagccagg 325
Query: 387 ag 388
||
Sbjct: 324 ag 323
>KJC_c00109
Length = 1002
Score = 131 bits (66), Expect = 2e-30
Identities = 153/182 (84%)
Strand = Plus / Plus
Query: 207 ggtgctgagatcatcggcacttttgttctagtctacactgttttctctgcaactgacccc 266
||||||||||| | ||||| |||||||| ||||||||||| ||||| || ||||| |
Sbjct: 624 ggtgctgagattgttggcacctttgttcttgtctacactgtcttctccgccactgatgct 683
Query: 267 aagagaagtgcacgtgactcacacgttcctattttggctccacttccaattgggtttgca 326
||||| || || | ||||| || || |||||||||||||| ||||| ||||||||||||
Sbjct: 684 aagaggagcgccagggactctcatgtccctattttggctcctcttcccattgggtttgca 743
Query: 327 gtttttatggttcacttggctaccatacccattactggtactggtattaacccagcgagg 386
|| || ||||||||||||| ||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 744 gtgttcttggttcacttggccaccatccccattactggaactggcattaacccagccagg 803
Query: 387 ag 388
||
Sbjct: 804 ag 805
>KJC_c01447
Length = 907
Score = 125 bits (63), Expect = 1e-28
Identities = 190/231 (82%), Gaps = 1/231 (0%)
Strand = Plus / Minus
Query: 207 ggtgctgagatcatcggcacttttgtt-ctagtctacactgttttctctgcaactgaccc 265
||||||||||| || || ||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct: 468 ggtgctgagattattggtacttttgtttcttgtctacactgtcttctctgctactgatcc 409
Query: 266 caagagaagtgcacgtgactcacacgttcctattttggctccacttccaattgggtttgc 325
|||||| | |||| | || || || |||||| ||||||| || |||||||||||||||||
Sbjct: 408 caagaggaatgcaagagattcccatgttcctgttttggcccctcttccaattgggtttgc 349
Query: 326 agtttttatggttcacttggctaccatacccattactggtactggtattaacccagcgag 385
|| || ||||||||| | || || || || |||||||| ||||| || ||||| || ||
Sbjct: 348 tgtgttcatggttcaccttgccacaattccaattactggcactggcatcaaccctgctag 289
Query: 386 gagcttcggtgctgctgttatttacaacaatgataaagtctgggatgatca 436
||| || || ||||||||||| |||||||| || || | |||||||||||
Sbjct: 288 gagttttggagctgctgttatctacaacaaagacaaggcatgggatgatca 238
>KJC_c04831
Length = 503
Score = 111 bits (56), Expect = 2e-24
Identities = 185/224 (82%), Gaps = 3/224 (1%)
Strand = Plus / Minus
Query: 189 agcaaaggaactgctttgggtgctgagatcatcggcacttttgttctagtctacactgtt 248
|||||||| |||| ||||| ||||| || || ||||| |||||||| |||||||||||
Sbjct: 486 agcaaaggcactggattgggagctga-attattggcacctttgttcttgtctacactgtc 428
Query: 249 ttctctgcaactgaccccaagagaagtgcacgtgactcacacgttcctattttggctcca 308
|||||||| ||||| || ||||||| ||| | ||||| || |||||| |||||||||||
Sbjct: 427 ttctctgctactgatcctaagagaaatgccagagactctcatgttcctgttttggctcca 368
Query: 309 cttccaattgggtttgcagtttttatggttcacttggctaccatacccattactggtact 368
||||||||||| ||||| || || ||||||||| |||| || || || || || || |||
Sbjct: 367 cttccaattggatttgctgtgttcatggttcac-tggccacaattccaataacaggaact 309
Query: 369 ggtattaacccagcgaggagcttcggtgctgctgttatttacaa 412
|| ||| ||||||| ||||| || || |||||||| ||||||||
Sbjct: 308 gggatt-acccagcaaggagttttggagctgctgtgatttacaa 266
>KJC_c07464
Length = 503
Score = 91.7 bits (46), Expect = 2e-18
Identities = 97/114 (85%)
Strand = Plus / Plus
Query: 207 ggtgctgagatcatcggcacttttgttctagtctacactgttttctctgcaactgacccc 266
||||||||||| || || ||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 342 ggtgctgagattattggtacttttgttcttgtctacactgtcttctctgctactgatccc 401
Query: 267 aagagaagtgcacgtgactcacacgttcctattttggctccacttccaattggg 320
||||| | |||| | || || || |||||| ||||||| || ||||||||||||
Sbjct: 402 aagaggaatgcaagagattcccatgttcctgttttggcccctcttccaattggg 455
Score = 56.0 bits (28), Expect = 9e-08
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 225 acttttgttctagtctacactgttttctctgcaactgaccccaa 268
||||||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 494 acttttgttcttgtctacactgtcttctctgctactgatcccaa 451
>KJC_c00178
Length = 1041
Score = 60.0 bits (30), Expect = 6e-09
Identities = 117/146 (80%)
Strand = Plus / Minus
Query: 237 gtctacactgttttctctgcaactgaccccaagagaagtgcacgtgactcacacgttcct 296
||||||||||| |||||||| ||||| |||| | | ||| | ||||| || ||||||
Sbjct: 393 gtctacactgtcttctctgctactgatgccaaacgtaatgccagagactcccatgttcct 334
Query: 297 attttggctccacttccaattgggtttgcagtttttatggttcacttggctaccataccc 356
|||||||| ||| | ||||||||||| || || || |||| ||||||||||| || ||
Sbjct: 333 attttggcaccattgccaattgggttcgccgtgttcttggtgcacttggctacaatccca 274
Query: 357 attactggtactggtattaacccagc 382
|| || || |||||||| ||||||||
Sbjct: 273 atcacaggaactggtatcaacccagc 248