Jatropha Genome Database

JcCB0836121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0836121.10 + phase: 1 /partial
         (199 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02114                                                            155   5e-38

>KJC_c02114 
          Length = 1119

 Score =  155 bits (78), Expect = 5e-38
 Identities = 95/98 (96%), Gaps = 2/98 (2%)
 Strand = Plus / Plus

                                                                       
Query: 102 cgagaggatcaagtgcagaatgctgtaaaaatttctttcacacccaaaaagttaggggtt 161
           |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1   cgagaggatcaagtgcagaatgctgtaaaa-tttctttcacacccaaaa-gttaggggtt 58

                                                 
Query: 162 ctccggccatgtataggcgatcctttcttgaaaggaag 199
           |||||| |||||||||||||||||||||||||||||||
Sbjct: 59  ctccggtcatgtataggcgatcctttcttgaaaggaag 96