Jatropha Genome Database
- JcCB0832141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0832141.10 + phase: 0 /partial
(412 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02845 803 0.0
KJC_c07090 454 e-128
KJC_c05092 268 1e-71
KJC_c00239 268 1e-71
>KJC_c02845
Length = 1003
Score = 803 bits (405), Expect = 0.0
Identities = 412/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1 atggatgctatagagcacagatttgttcaagtcaatggcattaacatacacgtggcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 atggatgctatagagcacagatttgttcaagtcaatggcattaacatacacgtggcagag 90
Query: 61 gcgggtccagtgaacggtcccgtaattctcttcatccatggattccctgaactatggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gcgggtccagtgaacggtcccgtaattctcttcatccatggattccctgaactatggtac 150
Query: 121 tcctggcggcaccagatcgtggctctggcttctctcggttaccgagctgtggcaccggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tcctggcggcaccagatcgtggctctggcttctctcggttaccgagctgtggcaccggac 210
Query: 181 atgagaggctacggcgacaccgatgcgccggatgatttacagagctacacttgtttccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atgagaggctacggcgacaccgatgcgccggatgatttacagagctacacttgtttccac 270
Query: 241 atcgtcggcgatctaatcgggcttctcgacgccgtagcaccacagcaagagaaggttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atcgtcggcgatctaatcgggcttctcgacgccgtagcaccacagcaagagaaggttttt 330
Query: 301 gttgttggccatgactggggcgcatacatagcttggcacttgtgtctgtttagaccagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gttgttggccatgactggggcgcatacatagcttggcacttgtgtctgtttagaccagac 390
Query: 361 agagtgaaagctttggtcaacctcagtgtggtg-ttgctcttcgaaaccctaa 412
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 391 agagtgaaagctttggtcaacctcagtgtggtgtttgctcttcgaaaccctaa 443
>KJC_c07090
Length = 445
Score = 454 bits (229), Expect = e-128
Identities = 351/389 (90%), Gaps = 2/389 (0%)
Strand = Plus / Plus
Query: 25 gttcaagtcaatggcattaacatacacgtggcagaggcgggtccagtgaacggtcccgta 84
||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||| || |||
Sbjct: 1 gttcacgtcaatggcatcaacatacatgtggcagaggcaggtccagttaacggcccggta 60
Query: 85 attctcttcatccatggattccctgaactatggtactcctggcggcaccagatcgtggct 144
|||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| |||
Sbjct: 61 attctcttcatccatggattccctgagctatggtattcctggcggtaccagatcgtcgct 120
Query: 145 ctggcttctctcggttaccgagctgtggcaccggacatgagaggctacggcgacaccgat 204
||||||||||| ||||||||||| | ||||||||||||||||| || ||||||||||||
Sbjct: 121 ctggcttctcttggttaccgagcaattgcaccggacatgagaggttatggcgacaccgat 180
Query: 205 gcgccggatgatttacagagctacacttgtttccacatcgtcggcgatctaatcgggctt 264
||||||| |||| |||||||||||||| |||||||||| || ||||||||||||||
Sbjct: 181 gcgccggctgatccgcagagctacacttgcctccacatcgtgggggatctaatcgggctc 240
Query: 265 ctcgacgccgtagcaccacagcaagagaaggtttttgttgttggccatgactggggcgca 324
||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct: 241 ctcgacgccgtggcaccacagcaggagaaggtttttgttgtcggccatgactggggtgca 300
Query: 325 tacatagcttggcacttgtgtctgtttagaccagacagagtgaaagctttggtcaacctc 384
|||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 301 tacatagcgtggtacttgtgtctgtttagaccagacagagtgaaagctttgg-aaacctg 359
Query: 385 agtgtggtg-ttgctcttcgaaaccctaa 412
||||||| | |||||| ||||||||||||
Sbjct: 360 agtgtggcgtttgctcctcgaaaccctaa 388
>KJC_c05092
Length = 868
Score = 268 bits (135), Expect = 1e-71
Identities = 294/347 (84%)
Strand = Plus / Minus
Query: 31 gtcaatggcattaacatacacgtggcagaggcgggtccagtgaacggtcccgtaattctc 90
|||||||| |||||||| || ||||| ||| ||| ||||| | || || || ||||||
Sbjct: 854 gtcaatggaattaacatgcatgtggcggagctgggcccagttcagggccctgtcattctc 795
Query: 91 ttcatccatggattccctgaactatggtactcctggcggcaccagatcgtggctctggct 150
||||||||||||||||| || ||||||||||||||||| ||||||||| | |||||||||
Sbjct: 794 ttcatccatggattcccggagctatggtactcctggcgccaccagatccttgctctggct 735
Query: 151 tctctcggttaccgagctgtggcaccggacatgagaggctacggcgacaccgatgcgccg 210
|||| ||||||||||| |||||||| || ||||||||||||| || ||||||||||||
Sbjct: 734 tctcaaggttaccgagcagtggcacccgatttgagaggctacggtgataccgatgcgccg 675
Query: 211 gatgatttacagagctacacttgtttccacatcgtcggcgatctaatcgggcttctcgac 270
| |||| |||||||||||||| ||||||||||| |||||| ||||| |||| ||||||
Sbjct: 674 gctgatccgcagagctacacttgcttccacatcgttggcgatttaatcaggctcctcgac 615
Query: 271 gccgtagcaccacagcaagagaaggtttttgttgttggccatgactggggcgcatacata 330
||||| ||||||||||| ||||| |||||||| || |||||||| ||||| || |||
Sbjct: 614 gccgtggcaccacagcaggagaaagtttttgtagtgggccatgattggggtgccctcatc 555
Query: 331 gcttggcacttgtgtctgtttagaccagacagagtgaaagctttggt 377
|||||| || | || ||||||||||||| ||||| |||||||||||
Sbjct: 554 gcttggtacctttgcttgtttagaccagatagagtaaaagctttggt 508
>KJC_c00239
Length = 1190
Score = 268 bits (135), Expect = 1e-71
Identities = 294/347 (84%)
Strand = Plus / Minus
Query: 31 gtcaatggcattaacatacacgtggcagaggcgggtccagtgaacggtcccgtaattctc 90
|||||||| |||||||| || ||||| ||| ||| ||||| | || || || ||||||
Sbjct: 1070 gtcaatggaattaacatgcatgtggcggagctgggcccagttcagggccctgtcattctc 1011
Query: 91 ttcatccatggattccctgaactatggtactcctggcggcaccagatcgtggctctggct 150
||||||||||||||||| || ||||||||||||||||| ||||||||| | |||||||||
Sbjct: 1010 ttcatccatggattcccggagctatggtactcctggcgccaccagatccttgctctggct 951
Query: 151 tctctcggttaccgagctgtggcaccggacatgagaggctacggcgacaccgatgcgccg 210
|||| ||||||||||| |||||||| || ||||||||||||| || ||||||||||||
Sbjct: 950 tctcaaggttaccgagcagtggcacccgatttgagaggctacggtgataccgatgcgccg 891
Query: 211 gatgatttacagagctacacttgtttccacatcgtcggcgatctaatcgggcttctcgac 270
| |||| |||||||||||||| ||||||||||| |||||| ||||| |||| ||||||
Sbjct: 890 gctgatccgcagagctacacttgcttccacatcgttggcgatttaatcaggctcctcgac 831
Query: 271 gccgtagcaccacagcaagagaaggtttttgttgttggccatgactggggcgcatacata 330
||||| ||||||||||| ||||| |||||||| || |||||||| ||||| || |||
Sbjct: 830 gccgtggcaccacagcaggagaaagtttttgtagtgggccatgattggggtgccctcatc 771
Query: 331 gcttggcacttgtgtctgtttagaccagacagagtgaaagctttggt 377
|||||| || | || ||||||||||||| ||||| |||||||||||
Sbjct: 770 gcttggtacctttgcttgtttagaccagatagagtaaaagctttggt 724