Jatropha Genome Database

JcCB0829751.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0829751.10 - phase: 2 /pseudo/partial
         (502 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01488                                                            848   0.0  

>KJC_c01488 
          Length = 745

 Score =  848 bits (428), Expect = 0.0
 Identities = 428/428 (100%)
 Strand = Plus / Minus

                                                                       
Query: 75  cccaatacattacccatgagaatcctgacaagggaacccagcttctttgcccaggcaagg 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cccaatacattacccatgagaatcctgacaagggaacccagcttctttgcccaggcaagg 499

                                                                       
Query: 135 tcaagatgccaatattaacagtttggatggaagtggaggctcaaaaatttgaaccagcag 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tcaagatgccaatattaacagtttggatggaagtggaggctcaaaaatttgaaccagcag 439

                                                                       
Query: 195 cctcaaagctcaactgggaagtgtttttgaagccaatttttggtttgacaacggattcag 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cctcaaagctcaactgggaagtgtttttgaagccaatttttggtttgacaacggattcag 379

                                                                       
Query: 255 ctgcagtagaggcgaatgaagctgagctttctaaggttcttgatgtttatgaggcaagac 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctgcagtagaggcgaatgaagctgagctttctaaggttcttgatgtttatgaggcaagac 319

                                                                       
Query: 315 tagctcaatctaagtacttggcttgtgattgcttcactttggtagatctacaccacttgc 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tagctcaatctaagtacttggcttgtgattgcttcactttggtagatctacaccacttgc 259

                                                                       
Query: 375 ctaacttacagctgctgttattgacacaaagcaagaaattgatcgagtcaagacctcatg 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctaacttacagctgctgttattgacacaaagcaagaaattgatcgagtcaagacctcatg 199

                                                                       
Query: 435 ttagcgcatgggctgctgatattacagcaagaccagcttgggctaaggttcttgctatgc 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttagcgcatgggctgctgatattacagcaagaccagcttgggctaaggttcttgctatgc 139

                   
Query: 495 agaagaag 502
           ||||||||
Sbjct: 138 agaagaag 131