Jatropha Genome Database

JcCB0827591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0827591.10 - phase: 0 
         (339 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01420                                                            630   0.0  

>KJC_c01420 
          Length = 963

 Score =  630 bits (318), Expect = 0.0
 Identities = 318/318 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaccgacggattcaacagctgcagaaatgtagtttgcaatttcacagaaggtgctatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgaccgacggattcaacagctgcagaaatgtagtttgcaatttcacagaaggtgctatg 259

                                                                       
Query: 61  tattcatttcctcaaatacggttgccacctaaagcaatagaggctgctaaaaggcttgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tattcatttcctcaaatacggttgccacctaaagcaatagaggctgctaaaaggcttgga 199

                                                                       
Query: 121 aaagttcctgatgttttctactgtcttaagcttttggaagctactggcatttccaccgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aaagttcctgatgttttctactgtcttaagcttttggaagctactggcatttccaccgtt 139

                                                                       
Query: 181 cctggttccggatttggacaaaaagaaggggtctttcatttaagaacaaccattttaccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cctggttccggatttggacaaaaagaaggggtctttcatttaagaacaaccattttaccg 79

                                                                       
Query: 241 gctgaggaagaaatgccggcaattatgtccagtttcaaaaagttcaatgatgagttcatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  gctgaggaagaaatgccggcaattatgtccagtttcaaaaagttcaatgatgagttcatg 19

                             
Query: 301 gagcaatatgaagatcat 318
           ||||||||||||||||||
Sbjct: 18  gagcaatatgaagatcat 1