Jatropha Genome Database
- JcCB0822121.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0822121.10 + phase: 0 /partial
(656 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00813 797 0.0
KJC_c00459 107 3e-23
>KJC_c00813
Length = 1085
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Plus
Query: 255 gtactcagatggttgctccacatcgactgcccttccattttcaaatgggttctcgatcca 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtactcagatggttgctccacatcgactgcccttccattttcaaatgggttctcgatcca 730
Query: 315 tgaccccaaccgtcttcagcaacctactagttcaatcgggcttaatcatcttactccaac 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgaccccaaccgtcttcagcaacctactagttcaatcgggcttaatcatcttactccaac 790
Query: 375 ccagatccaccagatccagacccaaatccattaccagaatcaaaatggattcaatttcca 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ccagatccaccagatccagacccaaatccattaccagaatcaaaatggattcaatttcca 850
Query: 435 gaatttccacacccaaaaccaacatggccttaactttttaggtccgaaacccgtgcccat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaatttccacacccaaaaccaacatggccttaactttttaggtccgaaacccgtgcccat 910
Query: 495 gaagcaggtgggttcaccaccaaaacccactaagctctacagaggagtaaggcagcgaca 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gaagcaggtgggttcaccaccaaaacccactaagctctacagaggagtaaggcagcgaca 970
Query: 555 ttggggcaaatgggttgccgagatccgactacccaagaaccgtacacgactctggcttgg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 ttggggcaaatgggttgccgagatccgactacccaagaaccgtacacgactctggcttgg 1030
Query: 615 tacttttgacacagcagaagaagccgctttagcttatgacaa 656
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 tacttttgacacagcagaagaagccgctttagcttatgacaa 1072
Score = 226 bits (114), Expect = 5e-59
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1 atggcaactacaatggatttctacagtagtagacatgttcagtctgacctctttggaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atggcaactacaatggatttctacagtagtagacatgttcagtctgacctctttggaggt 476
Query: 61 gagctaatggaagcacttgaaccttttatgaaaagtgctacttcttcaactata 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gagctaatggaagcacttgaaccttttatgaaaagtgctacttcttcaactata 530
>KJC_c00459
Length = 1191
Score = 107 bits (54), Expect = 3e-23
Identities = 120/142 (84%)
Strand = Plus / Plus
Query: 515 caaaacccactaagctctacagaggagtaaggcagcgacattggggcaaatgggttgccg 574
||||||| || || || ||||||||||||||||| ||||||||||||| |||||||| |
Sbjct: 557 caaaaccaacaaaactttacagaggagtaaggcaaagacattggggcaagtgggttgctg 616
Query: 575 agatccgactacccaagaaccgtacacgactctggcttggtacttttgacacagcagaag 634
| || |||| || || ||| | ||| ||||||||||||| |||||||||||||| ||||
Sbjct: 617 aaattagactccctaaaaacagaacaagactctggcttggcacttttgacacagccgaag 676
Query: 635 aagccgctttagcttatgacaa 656
|||| || || |||||||||||
Sbjct: 677 aagctgccttggcttatgacaa 698
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 65 taatggaagcacttgaaccttttatgaaaagtgct 99
||||| |||| ||||||||||||||||||||||||
Sbjct: 161 taatgaaagcgcttgaaccttttatgaaaagtgct 195