Jatropha Genome Database

JcCB0819391.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0819391.10 - phase: 1 /partial
         (485 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04251                                                            932   0.0  

>KJC_c04251 
          Length = 992

 Score =  932 bits (470), Expect = 0.0
 Identities = 485/490 (98%), Gaps = 5/490 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggaagtatagagttgcactggatagtgatgcatgggaatttggaggacaaggaagg-- 58
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 274 agggaagtatagagttgcactggatagtgatgcatgggaatttggaggacaaggaagggt 333

                                                                       
Query: 59  ---ccatgaggcagaacattttacatctcctgaagggatacctggagtggctgaaacaaa 115
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cagccatgaggcagaacattttacatctcctgaagggatacctggagtggctgaaacaaa 393

                                                                       
Query: 116 tttcaacaatcgtccgaactccttcaaagtactttccccagctcgcacatgtgtggctta 175
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tttcaacaatcgtccgaactccttcaaagtactttccccagctcgcacatgtgtggctta 453

                                                                       
Query: 176 ttacagagttgacgaaagccaagaaattaacaatggaggcaatctgggcgctgttgatga 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttacagagttgacgaaagccaagaaattaacaatggaggcaatctgggcgctgttgatga 513

                                                                       
Query: 236 gacattgacagctgatgctgtagagaagctagaggtttctgaagaagttgtcaagcagaa 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gacattgacagctgatgctgtagagaagctagaggtttctgaagaagttgtcaagcagaa 573

                                                                       
Query: 296 cttagccacagatacaatggaaaagaaggacaatttggaagaagtaaacaccaagaaatt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 cttagccacagatacaatggaaaagaaggacaatttggaagaagtaaacaccaagaaatt 633

                                                                       
Query: 356 agctgcagatactgcggtgaaccaggaggatattaaagaacctgctgattcgacgatgaa 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agctgcagatactgcggtgaaccaggaggatattaaagaacctgctgattcgacgatgaa 693

                                                                       
Query: 416 tggtgatgctggtccaactatggcagggaatgtagaagcagaagagattgagggagggaa 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tggtgatgctggtccaactatggcagggaatgtagaagcagaagagattgagggagggaa 753

                     
Query: 476 atcagatgac 485
           ||||||||||
Sbjct: 754 atcagatgac 763