Jatropha Genome Database

JcCB0813871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0813871.10 + phase: 0 
         (609 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06202                                                            910   0.0  

>KJC_c06202 
          Length = 916

 Score =  910 bits (459), Expect = 0.0
 Identities = 487/491 (99%), Gaps = 4/491 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   ggtggttcaaagaatggcgaggcatgtcctcagttactggatttgattccaagagaaaga 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 701 ggtggttcaaagaatggcgaggcatgtcctcagttactggatttgattccaagagaaag- 643

                                                                       
Query: 67  gaatggcttgttaaaagagctgatgaaagatctacagaggagaagaagcttgaactaagg 126
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gaatggcttgttaaa-gagctgatgaaagatctacagaggagaagaagcttgaactaagg 584

                                                                       
Query: 127 cttggtccacctggtgaagaatggtctcttggaaagacagctaaaaactcagatgataga 186
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 583 cttggtccacctggtgaagaatggtctcttggaaagacagctaaaa-ctcagatgataga 525

                                                                       
Query: 187 gtaagggacgagtttcttctctctctcggaaaccaacaaacccataagttctcttcacct 246
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gtaagggacgagtt-cttctctctctcggaaaccaacaaacccataagttctcttcacct 466

                                                                       
Query: 247 gagaacactcgagcaggttctgtgtggtttaatcaacaactatctcagcaggcgaaggct 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gagaacactcgagcaggttctgtgtggtttaatcaacaactatctcagcaggcgaaggct 406

                                                                       
Query: 307 gctactccatttctccagtttccaccaaaaacagtaacaacaacccaacagagcctgcct 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gctactccatttctccagtttccaccaaaaacagtaacaacaacccaacagagcctgcct 346

                                                                       
Query: 367 gttacgggaaaggaatcctcactgccctgttgcactaaagtggtagtagacttgcagcag 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gttacgggaaaggaatcctcactgccctgttgcactaaagtggtagtagacttgcagcag 286

                                                                       
Query: 427 agtgcagaaaagaaggggttttcacagccaactcctgcaaatacagctgtgcccaacagc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agtgcagaaaagaaggggttttcacagccaactcctgcaaatacagctgtgcccaacagc 226

                      
Query: 487 tctcagaaaag 497
           |||||||||||
Sbjct: 225 tctcagaaaag 215