Jatropha Genome Database

JcCB0795791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0795791.10 + phase: 0 /partial
         (651 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07571                                                            920   0.0  

>KJC_c07571 
          Length = 551

 Score =  920 bits (464), Expect = 0.0
 Identities = 485/488 (99%), Gaps = 3/488 (0%)
 Strand = Plus / Minus

                                                                       
Query: 164 atgaacttaactatattcggcaactccttgaagatgatgtttttaataattctgcttgga 223
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atgaacttaactatattcggcaactccttgaagatgatgtttttaataattctgcttgga 492

                                                                       
Query: 224 atcagagatattttgttataactagatctccctttctgggaggcctaaaagccatgagag 283
           ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 491 atcagagatattt-gttataactagatctcc-tttctgggaggcctaaaagccatgagag 434

                                                                       
Query: 284 agtccgaagtgaagtacacaattgaggccattttagctaaccctgagaatgagagcccat 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agtccgaagtgaagtacacaattgaggccattttagctaaccctgagaatgagagcccat 374

                                                                       
Query: 344 ggcgatatcttcgaggcctctataaagatgacactgaatcttggattaatgatcatcaag 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggcgatatcttcgaggcctctataaagatgacactgaatcttggattaatgatcatcaag 314

                                                                       
Query: 404 tctcaacggtatgtttgaaggttttgagtgtcaaaaccaaccacatatttgctttgagca 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tctcaacggtatgtttgaaggttttgagtgtcaaaaccaaccacatatttgctttgagca 254

                                                                       
Query: 464 cacttttggatcttctttgccatggttttaaagcaaaacaagagtttagagatgctgttg 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cacttttggatcttctttgccatggttttaaagcaaaacaagagtttagagatgctgttg 194

                                                                       
Query: 524 atgctctgagggcatcagatccagacccaccagagcctgacttggcaaaagctgtctgtt 583
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 193 atgctctgagggcatcagatccagacccaccagagcctgacttggc-aaagctgtctgtt 135

                                                                       
Query: 584 ctgttttggagcgtgtagatccaatgagagttaactattggatttggcgcaagaacaagc 643
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctgttttggagcgtgtagatccaatgagagttaactattggatttggcgcaagaacaagc 75

                   
Query: 644 gtcccgca 651
           ||||||||
Sbjct: 74  gtcccgca 67