Jatropha Genome Database

JcCB0781371.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0781371.10 + phase: 0 /pseudo/partial
         (261 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04520                                                            422   e-118

>KJC_c04520 
          Length = 679

 Score =  422 bits (213), Expect = e-118
 Identities = 213/213 (100%)
 Strand = Plus / Plus

                                                                       
Query: 9   gaaaagcttaaaagcaacttgtgaggagttcattatgtcagtcactaaactgattgtgga 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaaaagcttaaaagcaacttgtgaggagttcattatgtcagtcactaaactgattgtgga 60

                                                                       
Query: 69  tccaatgctgtcatttgctaccaaggttacggctgtaaaagttgcactgtcctctggcag 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tccaatgctgtcatttgctaccaaggttacggctgtaaaagttgcactgtcctctggcag 120

                                                                       
Query: 129 tcaaaatcagaaagtagagtcaattatggccaaaccactgaaggaccaagcctttgccag 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaaaatcagaaagtagagtcaattatggccaaaccactgaaggaccaagcctttgccag 180

                                            
Query: 189 tccagagaaggtggcagaacttgtgcagaaggt 221
           |||||||||||||||||||||||||||||||||
Sbjct: 181 tccagagaaggtggcagaacttgtgcagaaggt 213