Jatropha Genome Database

JcCB0778081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0778081.10 - phase: 0 /partial
         (222 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01566                                                            379   e-105

>KJC_c01566 
          Length = 1372

 Score =  379 bits (191), Expect = e-105
 Identities = 191/191 (100%)
 Strand = Plus / Minus

                                                                       
Query: 32  agaatatggcaaatcccactgccttactgttaagtgctgtcactatgttgcgccatttag 91
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agaatatggcaaatcccactgccttactgttaagtgctgtcactatgttgcgccatttag 448

                                                                       
Query: 92  agctccatgacaaggctgacaggattcagaatgctatccttaaaacaattgctgagggga 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agctccatgacaaggctgacaggattcagaatgctatccttaaaacaattgctgagggga 388

                                                                       
Query: 152 agtatagaactgccgaccttggtggcaaatcttctacaactgattttacgaaggcaatat 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtatagaactgccgaccttggtggcaaatcttctacaactgattttacgaaggcaatat 328

                      
Query: 212 gtgatcacctt 222
           |||||||||||
Sbjct: 327 gtgatcacctt 317