Jatropha Genome Database

JcCB0776371.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0776371.10 + phase: 1 /partial
         (503 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00746                                                            975   0.0  

>KJC_c00746 
          Length = 1833

 Score =  975 bits (492), Expect = 0.0
 Identities = 492/492 (100%)
 Strand = Plus / Minus

                                                                       
Query: 12  accgcatttgagcgtatttcatacacagaagcagtgcaactgttagagaaagctgtacaa 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 accgcatttgagcgtatttcatacacagaagcagtgcaactgttagagaaagctgtacaa 547

                                                                       
Query: 72  ggtggtaagcagtttgagaataaggtggaatggggaatagatctggcatcagagcatgag 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ggtggtaagcagtttgagaataaggtggaatggggaatagatctggcatcagagcatgag 487

                                                                       
Query: 132 agatacttgacagaggttttatttcagaagcctgtcattgtgtacaactatccaaaaggg 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agatacttgacagaggttttatttcagaagcctgtcattgtgtacaactatccaaaaggg 427

                                                                       
Query: 192 ataaaagcattttatatgaggctcaatgatgattcaaagacagtagctgcaatggatgtc 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ataaaagcattttatatgaggctcaatgatgattcaaagacagtagctgcaatggatgtc 367

                                                                       
Query: 252 cttgtacccaaggtaggggagttgattggcggaagccaaagagaagagcgcttggaggtc 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cttgtacccaaggtaggggagttgattggcggaagccaaagagaagagcgcttggaggtc 307

                                                                       
Query: 312 attcagcaaaggattgttgagatgggactacctcttgagccatatgagtggtaccttgac 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 attcagcaaaggattgttgagatgggactacctcttgagccatatgagtggtaccttgac 247

                                                                       
Query: 372 ttgcggcggtttgggacagtaaagcattgtggatttggcttaggctttgaacggatgata 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgcggcggtttgggacagtaaagcattgtggatttggcttaggctttgaacggatgata 187

                                                                       
Query: 432 ctattcgccactggcattgacaatataagagatgtcatccccttccctagatacccaggg 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctattcgccactggcattgacaatataagagatgtcatccccttccctagatacccaggg 127

                       
Query: 492 agagcagatctt 503
           ||||||||||||
Sbjct: 126 agagcagatctt 115