Jatropha Genome Database

JcCB0768001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0768001.10 - phase: 0 
         (201 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02161                                                            359   2e-99

>KJC_c02161 
          Length = 1334

 Score =  359 bits (181), Expect = 2e-99
 Identities = 181/181 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggcttcttcaattctttttccgacaaattctattactggaactcgaagcaagaatcct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 atggcttcttcaattctttttccgacaaattctattactggaactcgaagcaagaatcct 1211

                                                                        
Query: 61   gggttcttgccctcttgtggtcgacggtcggtggctcaggtggtgagaacgcaaaggctg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 gggttcttgccctcttgtggtcgacggtcggtggctcaggtggtgagaacgcaaaggctg 1151

                                                                        
Query: 121  tcatttgttcggtctgctttggactctttggagaccaaagtgtctgatatgagtgttaat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 tcatttgttcggtctgctttggactctttggagaccaaagtgtctgatatgagtgttaat 1091

             
Query: 181  g 181
            |
Sbjct: 1090 g 1090