Jatropha Genome Database

JcCB0765881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0765881.10 - phase: 2 /pseudo/partial
         (350 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c07816                                                            210   2e-54

>KJC_c07816 
          Length = 639

 Score =  210 bits (106), Expect = 2e-54
 Identities = 122/125 (97%), Gaps = 2/125 (1%)
 Strand = Plus / Minus

                                                                       
Query: 75  agactgaaatgacaactgctgaaagggaacttgaccaaaatttcaactttgattggaacc 134
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 124 agactgaaatgacaactgctgaaaggga-cttgaccaaaatttcaactttgattggaacc 66

                                                                       
Query: 135 gtatccaagaaagtggagaggaattggaacc-aatttttggaccaggttatacaggacta 193
           ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 65  gtatccaagaaagtgganaggaattggaacctaatttttggaccaggttatacaggacta 6

                
Query: 194 gtgaa 198
           |||||
Sbjct: 5   gtgaa 1