Jatropha Genome Database

JcCB0762541.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0762541.10 + phase: 2 /partial
         (209 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09920                                                            400   e-112

>KJC_c09920 
          Length = 762

 Score =  400 bits (202), Expect = e-112
 Identities = 209/210 (99%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctgatgcc-ataaatcctggaaacacactgtatgtcactggtctatctacaagggtca 59
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 acctgatgcctataaatcctggaaacacactgtatgtcactggtctatctacaagggtca 701

                                                                       
Query: 60  cagaaagggacttagaagaacatttctctaaggagggaaaggttgcttcatgctttcttg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cagaaagggacttagaagaacatttctctaaggagggaaaggttgcttcatgctttcttg 641

                                                                       
Query: 120 ttgtggagccccgcacacgcatttctcgtggttttgcttttgttacgatggacaacgttg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttgtggagccccgcacacgcatttctcgtggttttgcttttgttacgatggacaacgttg 581

                                         
Query: 180 aggctgcaaaccgttgtgttaagcatctca 209
           ||||||||||||||||||||||||||||||
Sbjct: 580 aggctgcaaaccgttgtgttaagcatctca 551